BAC Information

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BAC

Clone NameB6Ng01-155M14
Chromosome12 (Build37)
Map Location 106,102,143 - 106,247,583
singlet/doubletdoublet
Overlap geneClmn, 4831426I19Rik
Upstream geneLOC667954, Serpina1c, Serpina1e, Serpina11, Serpina9, Serpina12, Serpina4-ps1, Serpina5, Serpina3a, Serpina3b, Serpina3c, LOC435318, LOC628883, Serpina3f, LOC667997, Serpina3g, Serpina3h, EG628900, EG238395, Serpina3k, EG628916, Serpina3m, Serpina3n, Gsc, Dicer1
Downstream geneSnhg10, Glrx5, LOC100040301, Tcl1b2, Tcl1b1, Tcl1b5, Tcl1b3, Tcl1b4, Tcl1, LOC100040310, 2810011L19Rik, LOC100040339, EG668081, D430019H16Rik, Bdkrb2, Bdkrb1, 2410024A21Rik, 4933433P14Rik, Ak7, Papola
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155M14.bB6Ng01-155M14.g
ACCDH950474DH950475
length258971
definitionDH950474|Mus musculus domesticus DNA, BAC clone: B6Ng01-155M14, 5' end.DH950475|Mus musculus domesticus DNA, BAC clone: B6Ng01-155M14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,102,143 - 106,102,400)(106,246,612 - 106,247,583)
sequence
aaccttggactcttcttcagccccgagtcagtaggggaagtggcttaacc
cagcctcacctgtgcatggggccaggtgggtgaggaggccggaagtggat
ttatgtccaattctgcaaagctcccataggagagagggggctcgaaacac
actccacccacagggcttgagagcaatgccttttgcgagtgggaggggtg
ggtctcttttccttaagagcgctctctctctctctctctctctctctctc
tctctctc
gaattcagcccagggttcgtgacatttaatctctttggctttgggacgta
tccccagtgacttggagccctgcttcatctctgtagggatggcttctttc
tataatggatagccagggtatgcttgtggggtgactttagtaccaaaggg
gggtgtcacaccccatccttcgtgggtgggaaaaagcgactctgctcaag
accagtgtgtcatgctcgtactgcagccacacaggatagcccctttcgtg
tacccaggagagaagaaacaagcagagagagggggcgtgacttgctcaag
gcggcacagtctagatccgttgcgcaggaacttggctctcttgaagagct
ttcttagcctcgcctcttgctgggggagtggggaggggccaacagctcat
agggggcaggagctgggaggtaggaaggtgatctatgccagcgggctgtt
ttgctgggtttcctgtgaactgtgccccagagggacactctagcacacgt
gggctcgcacattccccgggcctgctgacagttacagctgagccaagctg
ctccccgcgtgccagagaggcccctctgggggtggctgtgtaggaatgta
ccaggaggccttatttctggagtcactgagggagggatgagaacccagga
tcctttgtcccctcagtgcggcaaagacctcagggtgtggcagagctgtt
ctgcctccatgggaacaactgcccactctcctgggggtctttgcacgctt
tcgagtgactatggacttagccctgtctgggcagcccctccacctagtga
tacagagacccgtggttgctcagggagcctggtgtggtcacattggacag
catgactgggcagggaagtattacctccagggaactgggagtctgtaagc
ccagagcctctggcccccagtgtcatttcgctttagagaaagggtggtca
aatcagtatggcacctttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_106102143_106102400
seq2: B6Ng01-155M14.b_52_309

seq1  AACCTTGGACTCTTCTTCAGCCCCGAGTCAGTAGGGGAAGTGGCTTAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGGACTCTTCTTCAGCCCCGAGTCAGTAGGGGAAGTGGCTTAACC  50

seq1  CAGCCTCACCTGTGCATGGGGCCAGGTGGGTGAGGAGGCCGGAAGTGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCACCTGTGCATGGGGCCAGGTGGGTGAGGAGGCCGGAAGTGGAT  100

seq1  TTATGTCCAATTCTGCAAAGCTCCCATAGGAGAGAGGGGGCTCGAAACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCCAATTCTGCAAAGCTCCCATAGGAGAGAGGGGGCTCGAAACAC  150

seq1  ACTCCACCCACAGGGCTTGAGAGCAATGCCTTTTGCGAGTGGGAGGGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCACCCACAGGGCTTGAGAGCAATGCCTTTTGCGAGTGGGAGGGGTG  200

seq1  GGTCTCTTTTCCTTAAGAGCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTTTTCCTTAAGAGCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  250

seq1  TCTCTCTC  258
      ||||||||
seq2  TCTCTCTC  258

seq1: chr12_106246612_106247583
seq2: B6Ng01-155M14.g_70_1039 (reverse)

seq1  CCAAAGTGGCCAT-CTGATTTGACCACCCTTTCTCTTATAGCGAAATGAC  49
      ||||||  ||||| ||||||||||||||||||||| || |||||||||||
seq2  CCAAAGGTGCCATACTGATTTGACCACCCTTTCTC-TAAAGCGAAATGAC  49

seq1  ACTGGGGGCCAGAGGCTTCTGGGCTTACAGACTCCACAGTCCCTTGGAGG  99
      |||||||||||||||| |||||||||||||||||| |||| || ||||||
seq2  ACTGGGGGCCAGAGGC-TCTGGGCTTACAGACTCC-CAGTTCCCTGGAGG  97

seq1  TAATACTTCCCTGCCCAGTCATGCTGTCCAATGTGACCACACCAGGCTCC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTTCCCTGCCCAGTCATGCTGTCCAATGTGACCACACCAGGCTCC  147

seq1  CTGAGCAACCACGGGTCTCTGTATCACTAGGTGGAGGGGCTGCCCAGACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAACCACGGGTCTCTGTATCACTAGGTGGAGGGGCTGCCCAGACA  197

seq1  GGGCTAAGTCCATAGTCACTCGAAAGCGTGCAAAGACCCCCAGGAGAGTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAAGTCCATAGTCACTCGAAAGCGTGCAAAGACCCCCAGGAGAGTG  247

seq1  GGCAGTTGTTCCCATGGAGGCAGAACAGCTCTGCCACACCCTGAGGTCTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTGTTCCCATGGAGGCAGAACAGCTCTGCCACACCCTGAGGTCTT  297

seq1  TGCCGCACTGAGGGGACAAAGGATCCTGGGTTCTCATCCCTCCCTCAGTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGCACTGAGGGGACAAAGGATCCTGGGTTCTCATCCCTCCCTCAGTG  347

seq1  ACTCCAGAAATAAGGCCTCCTGGTACATTCCTACACAGCCACCCCCAGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGAAATAAGGCCTCCTGGTACATTCCTACACAGCCACCCCCAGAG  397

seq1  GGGCCTCTCTGGCACGCGGGGAGCAGCTTGGCTCAGCTGTAACTGTCAGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCTCTGGCACGCGGGGAGCAGCTTGGCTCAGCTGTAACTGTCAGC  447

seq1  AGGCCCGGGGAATGTGCGAGCCCACGTGTGCTAGAGTGTCCCTCTGGGGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCGGGGAATGTGCGAGCCCACGTGTGCTAGAGTGTCCCTCTGGGGC  497

seq1  ACAGTTCACAGGAAACCCAGCAAAACAGCCCGCTGGCATAGATCACCTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCACAGGAAACCCAGCAAAACAGCCCGCTGGCATAGATCACCTTC  547

seq1  CTACCTCCCAGCTCCTGCCCCCTATGAGCTGTTGGCCCCTCCCCACTCCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTCCCAGCTCCTGCCCCCTATGAGCTGTTGGCCCCTCCCCACTCCC  597

seq1  CCAGCAAGAGGCGAGGCTAAGAAAGCTCTTCAAGAGAGCCAAGTTCCTGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAAGAGGCGAGGCTAAGAAAGCTCTTCAAGAGAGCCAAGTTCCTGC  647

seq1  GCAACGGATCTAGACTGTGCCGCCTTGAGCAAGTCACGCCCCCTCTCTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACGGATCTAGACTGTGCCGCCTTGAGCAAGTCACGCCCCCTCTCTCT  697

seq1  GCTTGTTTCTTCTCTCCTGGGTACACGAAAGGGGCTATCCTGTGTGGCTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTTCTTCTCTCCTGGGTACACGAAAGGGGCTATCCTGTGTGGCTG  747

seq1  CAGTACGAGCATGACACACTGGTCTTGAGCAGAGTCGCTTTTTCCCACCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACGAGCATGACACACTGGTCTTGAGCAGAGTCGCTTTTTCCCACCC  797

seq1  ACGAAGGATGGGGTGTGACACCCCCCTTTGGTACTAAAGTCACCCCACAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAGGATGGGGTGTGACACCCCCCTTTGGTACTAAAGTCACCCCACAA  847

seq1  GCATACCCTGGCTATCCATTATAGAAAGAAGCCATCCCTACAGAGATGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACCCTGGCTATCCATTATAGAAAGAAGCCATCCCTACAGAGATGAA  897

seq1  GCAGGGCTCCAAGTCACTGGGGATACGTCCCAAAGCCAAAGAGATTAAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGCTCCAAGTCACTGGGGATACGTCCCAAAGCCAAAGAGATTAAAT  947

seq1  GTCACGAACCCTGGGCTGAATTC  972
      |||||||||||||||||||||||
seq2  GTCACGAACCCTGGGCTGAATTC  970