BAC Information

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BAC

Clone NameB6Ng01-155P22
Chromosome12 (Build37)
Map Location 97,523,092 - 97,637,322
singlet/doubletdoublet
Overlap geneLOC100039664
Upstream geneLOC667688, Flrt2, 1700019M22Rik
Downstream geneEG628277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155P22.bB6Ng01-155P22.g
ACCDH950620DH950621
length1,105528
definitionDH950620|Mus musculus domesticus DNA, BAC clone: B6Ng01-155P22, 5' end.DH950621|Mus musculus domesticus DNA, BAC clone: B6Ng01-155P22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,636,197 - 97,637,322)(97,523,092 - 97,523,736)
sequence
gaattccagtcagcgtggcatttcagcaggaagcactttataagacttaa
acttatgagtagcaaagtttaaaactcaagagagagggacagaaattaaa
cacagtcagtgattcattttaaatcaaaaagcaacaaaccaaacctcacc
atttccatttctctgtctttcctcactgcccttggattctcttacaaaat
tagcatggagcccttgcattgactgtgggctttataagtgtcctaagaat
ttctaacctatcatctcatctagattacataggattagttagaaaaatgt
tattgtctgctgtgcaagaaggaggtaaagtaaatttgctgtttgcttaa
aatgaaatctcatattcatgttagtcgtgataaatgctattaggcaattt
acaaaagacttgtaccatttcagaagtttaattgggattgaacacagtct
actgcaagtttgagtaaacatggcacctatgtaataaggaagataatgcc
agtaatagatatatagaaactagcaagaaagggtcgtctggtagactcct
ctatgtcaccttcatttgctcattattttcttagcaaacagcaaaccagc
tccagcttccgtaaaaagacaatgcattcttgtagcagatcctattatgc
catgtagctttcttccccacataaaagtcactagaatcagtcttccagtg
tatctcagacttaacctgtcaacgttgaactcttgatcctctaccaaacc
atgcttgacccattgacataaatacaactgtcattcagtgagtgcattag
tgaacttcccccaagtagcagatgcctgatataaatctacttgttaggaa
gaaaagtttcttcttctctcatagcttcagtgatctcattcaagagatgg
cgaatggatcacctttggacccctgatgatagatagcaagcgtcttagaa
agcatctacctagatagtcattcacttagggctactatattaaagagagg
gagggagagcagatgtgtgactgtctctttcagagcatatgcagtgactg
aaaatgtcactaattcccctcctaaatgtctactactctattatgacgtg
tagca
tgtaggctacatgtgggtccaaatgaataaattcatttgtgagcacatgt
attaagagataagagagagagagagttttgcatctctgatttgcaggtgt
atctgacttgtccaaagttctatcttataactcagtttaaactcttgaat
atttcatgtgtttaataaatgtttgctcaataaatgaatgattaatgagg
caataagtttctctttgttttcatggatgctttgtaccaagaggaaagaa
tagcagtttgtgcatacacacacacacacacacacagacagaggggctag
ggaggcatggagagagagagagagagagagagagagagagagagagagag
agagagagagagagagagagagaagtgatagacttgtaaaacagcatgga
gtttagtgctcggcaatccaatggccattaggaaaaaggacaaaattttc
acatcaataaactgagatgtttctataataacattaattatccatgtgtc
tgaggctatgtgagaggacttttgcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_97636197_97637322
seq2: B6Ng01-155P22.b_48_1152 (reverse)

seq1  TGCTACACTGTCATTATTAGGAAGTAGTAGACATTTAAGGAGGGGGAAAT  50
      |||||||| |||| || |||  |||||||||||||| ||||||||  |||
seq2  TGCTACAC-GTCA-TAATAG--AGTAGTAGACATTT-AGGAGGGG--AAT  43

seq1  TAGTTGGACATTTTTCAGTCACTGGCAATATGCTCTTGAAAGAGACAGTC  100
      ||||  |||| |||||||||||||   |||||||| ||||||||||||||
seq2  TAGT--GACA-TTTTCAGTCACTG--CATATGCTC-TGAAAGAGACAGTC  87

seq1  ACACATCTGCCTCTTCCCTCCCTCTCTTTTAATATAGTAGCCCCTAAGTG  150
      ||||||||| ||| |||||||||||| ||||||||||||| |||||||||
seq2  ACACATCTG-CTC-TCCCTCCCTCTC-TTTAATATAGTAG-CCCTAAGTG  133

seq1  AATGACTTATCTAGGTAAGATGCTTTCCTAAGACGCTTTGCTATCTATCA  200
      |||||| ||||||||| ||||||||| ||||||||| |||||||||||||
seq2  AATGAC-TATCTAGGT-AGATGCTTT-CTAAGACGC-TTGCTATCTATCA  179

seq1  TCAGGGGTCCAAAGGTGATCCATTCGCCATCTCTTGAATGAGATCACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGTCCAAAGGTGATCCATTCGCCATCTCTTGAATGAGATCACTGA  229

seq1  AGCTATGAGAGAAGAAGAAACTTTTCTTCCTAACAAGTAGATTTATATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGAGAGAAGAAGAAACTTTTCTTCCTAACAAGTAGATTTATATCA  279

seq1  GGCATCTGCTACTTGGGGGAAGTTCACTAATGCACTCACTGAATGACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTGCTACTTGGGGGAAGTTCACTAATGCACTCACTGAATGACAGT  329

seq1  TGTATTTATGTCAATGGGTCAAGCATGGTTTGGTAGAGGATCAAGAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTATGTCAATGGGTCAAGCATGGTTTGGTAGAGGATCAAGAGTTC  379

seq1  AACGTTGACAGGTTAAGTCTGAGATACACTGGAAGACTGATTCTAGTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTGACAGGTTAAGTCTGAGATACACTGGAAGACTGATTCTAGTGAC  429

seq1  TTTTATGTGGGGAAGAAAGCTACATGGCATAATAGGATCTGCTACAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTGGGGAAGAAAGCTACATGGCATAATAGGATCTGCTACAAGAA  479

seq1  TGCATTGTCTTTTTACGGAAGCTGGAGCTGGTTTGCTGTTTGCTAAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGTCTTTTTACGGAAGCTGGAGCTGGTTTGCTGTTTGCTAAGAAA  529

seq1  ATAATGAGCAAATGAAGGTGACATAGAGGAGTCTACCAGACGACCCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAGCAAATGAAGGTGACATAGAGGAGTCTACCAGACGACCCTTTC  579

seq1  TTGCTAGTTTCTATATATCTATTACTGGCATTATCTTCCTTATTACATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGTTTCTATATATCTATTACTGGCATTATCTTCCTTATTACATAG  629

seq1  GTGCCATGTTTACTCAAACTTGCAGTAGACTGTGTTCAATCCCAATTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCATGTTTACTCAAACTTGCAGTAGACTGTGTTCAATCCCAATTAAA  679

seq1  CTTCTGAAATGGTACAAGTCTTTTGTAAATTGCCTAATAGCATTTATCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGAAATGGTACAAGTCTTTTGTAAATTGCCTAATAGCATTTATCAC  729

seq1  GACTAACATGAATATGAGATTTCATTTTAAGCAAACAGCAAATTTACTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAACATGAATATGAGATTTCATTTTAAGCAAACAGCAAATTTACTTT  779

seq1  ACCTCCTTCTTGCACAGCAGACAATAACATTTTTCTAACTAATCCTATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTTCTTGCACAGCAGACAATAACATTTTTCTAACTAATCCTATGT  829

seq1  AATCTAGATGAGATGATAGGTTAGAAATTCTTAGGACACTTATAAAGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAGATGAGATGATAGGTTAGAAATTCTTAGGACACTTATAAAGCCC  879

seq1  ACAGTCAATGCAAGGGCTCCATGCTAATTTTGTAAGAGAATCCAAGGGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAATGCAAGGGCTCCATGCTAATTTTGTAAGAGAATCCAAGGGCA  929

seq1  GTGAGGAAAGACAGAGAAATGGAAATGGTGAGGTTTGGTTTGTTGCTTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGAAAGACAGAGAAATGGAAATGGTGAGGTTTGGTTTGTTGCTTTT  979

seq1  TGATTTAAAATGAATCACTGACTGTGTTTAATTTCTGTCCCTCTCTCTTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAAAATGAATCACTGACTGTGTTTAATTTCTGTCCCTCTCTCTTG  1029

seq1  AGTTTTAAACTTTGCTACTCATAAGTTTAAGTCTTATAAAGTGCTTCCTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAAACTTTGCTACTCATAAGTTTAAGTCTTATAAAGTGCTTCCTG  1079

seq1  CTGAAATGCCACGCTGACTGGAATTC  1126
      ||||||||||||||||||||||||||
seq2  CTGAAATGCCACGCTGACTGGAATTC  1105

seq1: chr12_97523092_97523736
seq2: B6Ng01-155P22.g_69_602

seq1  GAATTCTGTAGGCTACATGTGGGTCCAAATGAATAAATTCATTTGTGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAGGCTACATGTGGGTCCAAATGAATAAATTCATTTGTGAGC  50

seq1  ACATGTATTAAGAGATAAGAGAGAGAGAGAGTTTTGCATCTCTGATTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTATTAAGAGATAAGAGAGAGAGAGAGTTTTGCATCTCTGATTTGC  100

seq1  AGGTGTATCTGACTTGTCCAAAGTTCTATCTTATAACTCAGTTTAAACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTATCTGACTTGTCCAAAGTTCTATCTTATAACTCAGTTTAAACTC  150

seq1  TTGAATATTTCATGTGTTTAATAAATGTTTGCTCAATAAATGAATGATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATATTTCATGTGTTTAATAAATGTTTGCTCAATAAATGAATGATTA  200

seq1  ATGAGGCAATAAGTTTCTCTTTGTTTTCATGGATGCTTTGTACCAAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCAATAAGTTTCTCTTTGTTTTCATGGATGCTTTGTACCAAGAGG  250

seq1  AAAGAATAGCAGTTTGTGCATACACACACACACACACACACAGACAGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATAGCAGTTTGTGCATACACACACACACACACACACAGACAGAGG  300

seq1  GGCTAGGGAGGCATGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGGGAGGCATGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  350

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGTGATAGACTTGTAAAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGTGATAGACTTGTAAAACAG  400

seq1  CATGGAGTTTAGTGCTCGGCAATCCAATGGCCATTAGGAAAAAGGACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGTTTAGTGCTCGGCAATCCAATGGCCATTAGGAAAAAGGACAAA  450

seq1  ATTTTCACATCAATAAACTGAGATGTTTCTATAATAACATTAATTATCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCACATCAATAAACTGAGATGTTTCTATAATAACATTAATTATCCA  500

seq1  TGTGTCTGAGGCTATGTGAGAGGAC-TTTGCAAAATGAATAGATGCATGT  549
      ||||||||||||||||||||||||| ||||||||                
seq2  TGTGTCTGAGGCTATGTGAGAGGACTTTTGCAAA----------------  534

seq1  GACTCATTCTTGAGTTTGGCATCTCCAATGTATCCTGGGAGTCAGAATTG  599
                                                        
seq2  --------------------------------------------------  534

seq1  AGTCACAAGTTAGTAAAACCTTTTTGGAAATGTCAGAACTTGCAAA  645
                                                    
seq2  ----------------------------------------------  534