BAC Information

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BAC

Clone NameB6Ng01-156O06
Chromosome12 (Build37)
Map Location 43,757,621 - 43,898,044
singlet/doubletdoublet
Overlap genenone
Upstream geneImmp2l, EG638533
Downstream geneLOC100039059
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156O06.bB6Ng01-156O06.g
ACCDH951274DH951275
length6371,039
definitionDH951274|Mus musculus domesticus DNA, BAC clone: B6Ng01-156O06, 5' end.DH951275|Mus musculus domesticus DNA, BAC clone: B6Ng01-156O06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,897,408 - 43,898,044)(43,757,621 - 43,758,675)
sequence
gaattctttgttttggactctcaagaaaagctaacctttcgcccagaaaa
atttcaggatttttataacaaattcttttacatggatataaatgtagagg
aaggaattgtaactgcctccatgggacttactattacttgataaagagaa
acaactgtggttcctgttaggctacaggactgttgagatgggggattcta
aggaactggggattctgttgaatctttactagggaaggaaaatattatag
tcctggtggtactgaaaggcaagcttatatcttgggagccaaagataatg
atagccaggacaaaaatctataaaaactgtttcatatgtataattcttgg
cctcagttaaaattctaaactacatgtcaatgttccaaaaggagaatact
ttaaaaggtctctcccatgggacaaccaggagtctcaactaacctggatc
cctgagatttctcagacactgagccaccaaccaggcagcatacactagct
ggtccaaagccgccaacacatatagagcagaggactgcctggtctggtct
caatgagagaagacacacctaacccttgaaagacttgaggtcccagggaa
tgggtggtctggcagggtttggtggtgggtgtgggtg
gaattcaagtaaaagcacttacaaaaccacctgtagagaattttaaatgt
ttaaataatgaatccatagtaaaaactgttaaagttacttagaggtgagg
aaattacagtgcatattatacaaaggtaaacaaatgggagagaaatacgg
aaactaaaaaaaatggtgactaacaccttgaaagtgctgtagctcacatg
aagaattggaggctggtaaggggcaatgccctgtgattatccaaatcaag
cacctgcaatccaagtcagtaagaggtaccaagtaggacatgtgtagtta
atctactgaataaggtgatgacgatgacgatgatgatgatgatcactctc
ctgctcttctagctaaaatttttgaaatttatgcattttaactcctgctt
ttacatcaggtcttcatgtggatttaggtcttaactctttttcggcaatc
tctaatctctagttattcctctggttttattcatccttcttatttgagtt
ttgacttttgcttcttttatacaaatactctactgattttcctcctgagc
tcttccaaatattaactaatctggttatttctttgtatttttaaaatatt
ttttatcatagaagggttttctttcttctgcttcttccagctccctccta
cctgtctcccagccctacctacctattttctgtctcgtattaaaaacaaa
cagcattctaaaggataataataataataataatgtaaaatgagtaacca
aacatgagaataggacaagatgaatgaacagaaggaaatagctcaagaaa
aagcttaagaaacagatgtagtccaacttattcacacacatgtgattccc
ataacaacacaaaactagaagttgtgatatatacccaaaggaactgtggg
gtaaacagagaggaaataaataaaattaaatttgaaattaaataatataa
aattataaaacaaacagcctagcatgcattctgagacatgtactcaaggt
gcatgagtcctttctgttgatctacttatatatattatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_43897408_43898044
seq2: B6Ng01-156O06.b_47_683 (reverse)

seq1  CACCCACACCCACCACCAAACCCTGCCAGACCACCCATTCCCTGGGACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACACCCACCACCAAACCCTGCCAGACCACCCATTCCCTGGGACCT  50

seq1  CAAGTCTTTCAAGGGTTAGGTGTGTCTTCTCTCATTGAGACCAGACCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTTTCAAGGGTTAGGTGTGTCTTCTCTCATTGAGACCAGACCAGG  100

seq1  CAGTCCTCTGCTCTATATGTGTTGGCGGCTTTGGACCAGCTAGTGTATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTCTGCTCTATATGTGTTGGCGGCTTTGGACCAGCTAGTGTATGC  150

seq1  TGCCTGGTTGGTGGCTCAGTGTCTGAGAAATCTCAGGGATCCAGGTTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGTTGGTGGCTCAGTGTCTGAGAAATCTCAGGGATCCAGGTTAGT  200

seq1  TGAGACTCCTGGTTGTCCCATGGGAGAGACCTTTTAAAGTATTCTCCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTCCTGGTTGTCCCATGGGAGAGACCTTTTAAAGTATTCTCCTTT  250

seq1  TGGAACATTGACATGTAGTTTAGAATTTTAACTGAGGCCAAGAATTATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACATTGACATGTAGTTTAGAATTTTAACTGAGGCCAAGAATTATAC  300

seq1  ATATGAAACAGTTTTTATAGATTTTTGTCCTGGCTATCATTATCTTTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAACAGTTTTTATAGATTTTTGTCCTGGCTATCATTATCTTTGGC  350

seq1  TCCCAAGATATAAGCTTGCCTTTCAGTACCACCAGGACTATAATATTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGATATAAGCTTGCCTTTCAGTACCACCAGGACTATAATATTTTC  400

seq1  CTTCCCTAGTAAAGATTCAACAGAATCCCCAGTTCCTTAGAATCCCCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTAGTAAAGATTCAACAGAATCCCCAGTTCCTTAGAATCCCCCAT  450

seq1  CTCAACAGTCCTGTAGCCTAACAGGAACCACAGTTGTTTCTCTTTATCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACAGTCCTGTAGCCTAACAGGAACCACAGTTGTTTCTCTTTATCAA  500

seq1  GTAATAGTAAGTCCCATGGAGGCAGTTACAATTCCTTCCTCTACATTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAGTAAGTCCCATGGAGGCAGTTACAATTCCTTCCTCTACATTTAT  550

seq1  ATCCATGTAAAAGAATTTGTTATAAAAATCCTGAAATTTTTCTGGGCGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGTAAAAGAATTTGTTATAAAAATCCTGAAATTTTTCTGGGCGAA  600

seq1  AGGTTAGCTTTTCTTGAGAGTCCAAAACAAAGAATTC  637
      |||||||||||||||||||||||||||||||||||||
seq2  AGGTTAGCTTTTCTTGAGAGTCCAAAACAAAGAATTC  637

seq1: chr12_43757621_43758675
seq2: B6Ng01-156O06.g_67_1105

seq1  GAATTCAAGTAAAAGCACTTACAAAACCACCTGTAGAGAATTTTAAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTAAAAGCACTTACAAAACCACCTGTAGAGAATTTTAAATGT  50

seq1  TTAAATAATGAATCCATAGTAAAAACTGTTAAAGTTACTTAGAGGTGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAATGAATCCATAGTAAAAACTGTTAAAGTTACTTAGAGGTGAGG  100

seq1  AAATTACAGTGCATATTATACAAAGGTAAACAAATGGGAGAGAAATACGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACAGTGCATATTATACAAAGGTAAACAAATGGGAGAGAAATACGG  150

seq1  AAACTAAAAAAAATGGTGACTAACACCTTGAAAGTGCTGTAGCTCACATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAAAAAAATGGTGACTAACACCTTGAAAGTGCTGTAGCTCACATG  200

seq1  AAGAATTGGAGGCTGGTAAGGGGCAATGCCCTGTGATTATCCAAATCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTGGAGGCTGGTAAGGGGCAATGCCCTGTGATTATCCAAATCAAG  250

seq1  CACCTGCAATCCAAGTCAGTAAGAGGTACCAAGTAGGACATGTGTAGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCAATCCAAGTCAGTAAGAGGTACCAAGTAGGACATGTGTAGTTA  300

seq1  ATCTACTGAATAAGGTGATGACGATGACGATGATGATGATGATCACTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTGAATAAGGTGATGACGATGACGATGATGATGATGATCACTCTC  350

seq1  CTGCTCTTCTAGCTAAAATTTTTGAAATTTATGCATTTTAACTCCTGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTTCTAGCTAAAATTTTTGAAATTTATGCATTTTAACTCCTGCTT  400

seq1  TTACATCAGGTCTTCATGTGGATTTAGGTCTTAACTCTTTTTCGGCAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATCAGGTCTTCATGTGGATTTAGGTCTTAACTCTTTTTCGGCAATC  450

seq1  TCTAATCTCTAGTTATTCCTCTGGTTTTATTCATCCTTCTTATTTGAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATCTCTAGTTATTCCTCTGGTTTTATTCATCCTTCTTATTTGAGTT  500

seq1  TTGACTTTTGCTTCTTTTATACAAATACTCTACTGATTTTCCTCCTGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTTTGCTTCTTTTATACAAATACTCTACTGATTTTCCTCCTGAGC  550

seq1  TCTTCCAAATATTAACTAATCTGGTTATTTCTTTGTATTTTTAAAATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAAATATTAACTAATCTGGTTATTTCTTTGTATTTTTAAAATATT  600

seq1  TTTTATCATAGAAGGGTTTTCTTTCTTCTGCTTCTTCCAGCTCCCTCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCATAGAAGGGTTTTCTTTCTTCTGCTTCTTCCAGCTCCCTCCTA  650

seq1  CCTGTCTCCCAGCCCTACCTACCTATTTTCTGTCTCGTATTAAAAACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTCCCAGCCCTACCTACCTATTTTCTGTCTCGTATTAAAAACAAA  700

seq1  CAGCATTCTAAAGGATAATAATAATAATAATAATGTAAAATGAGTAACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTCTAAAGGATAATAATAATAATAATAATGTAAAATGAGTAACCA  750

seq1  AACATGAGAATAGGACAAGATGAATGAACAGAAGGAAAATAGCTCAAGAA  800
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AACATGAGAATAGGACAAGATGAATGAACAGAAGG-AAATAGCTCAAGAA  799

seq1  AAAGCTTAAGAAACAGATGTAGTCCAACTTATTCACACACATGTGATTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTAAGAAACAGATGTAGTCCAACTTATTCACACACATGTGATTCC  849

seq1  CATAACAACACAAAACTAGAAGTTGTGATATATACCCAAAGGAACTGTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACAACACAAAACTAGAAGTTGTGATATATACCCAAAGGAACTGTGG  899

seq1  GGTAAACAGAGAGGAAAATAAATAAAATTAAATTTGAAAATTAAAATAAT  950
      |||||||||||||| ||||||||||||||||||||||||  | |||||||
seq2  GGTAAACAGAGAGG-AAATAAATAAAATTAAATTTGAAA--TTAAATAAT  946

seq1  ATAAAAATTAATAAAAACAAAACAGCCCTAGCATGCAATTCTGAGACAAT  1000
      ||||||  | ||||||   |||||| |||||||||| |||||||||| ||
seq2  ATAAAA--TTATAAAA--CAAACAG-CCTAGCATGC-ATTCTGAGAC-AT  989

seq1  GTACCTCCAAAGGTGCCATTGAGTTCCCTTTCTGTTGGATCTACTT---T  1047
      ||| |||  |||||||   |||||  |||||||||| |||||||||   |
seq2  GTA-CTC--AAGGTGC--ATGAGT--CCTTTCTGTT-GATCTACTTATAT  1031

seq1  TTATTATT  1055
       |||||||
seq2  ATATTATT  1039