BAC Information

Click to search

BAC

Clone NameB6Ng01-156P01
Chromosome12 (Build37)
Map Location 49,488,259 - 49,489,320
singlet/doubletsinglet
Overlap genenone
Upstream geneEG664891
Downstream geneGm1818, GA_x5J8B7W54VK-284379-285078, Olfr1399-ps1, EG665036, LOC100039366, Foxg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156P01.bB6Ng01-156P01.g
ACCDH951306DH951307
length1,061448
definitionDH951306|Mus musculus domesticus DNA, BAC clone: B6Ng01-156P01, 5' end.DH951307|Mus musculus domesticus DNA, BAC clone: B6Ng01-156P01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagagtggttgtacaagcttgcaatcccaccaacaatggaggag
tattcctctttctccacatcctcgacagcatctgctgtcaactgaattaa
ccctaatacacacttttaattccaaacaatgacatctaattgagggagag
agagagtaaggaatcacagaatgatttgataagatcagatgcacacaaat
ctcacaagagcagcacaggaaagggaagctgtttaagaggaacgcaggga
gagtgttgggagtcagctgggagccagctccgtccatacagttcttttaa
gcaaagttcagctcagtgcagttcagttgagttccctctgagttcaggtc
agtcactctgttctgttgcatgaaacccctcagcccattggaagctcagc
attttcacagcatagatttgagcagagatgtccaactgacaaataagtgg
agtcattgcaaataaataaccaagtagtcggggtttgtgggtatatatct
agataaaggagacaaacttatctaatctgagtaggaacagtctctgaagg
ggagcagttgtcaggctacaaacgactcagtgacaaacattatggtgggc
agtttctgctcacactgtgaacacaggaaatccagaagaaggctttctca
gttccttctctgaacctcagcagagatgtgaaggaagctttgctttcatg
ggcttgaggccctggggtcctcgatttttgctgtgctcatgtaagtatca
cacacttagtcaggactctgctcactcagggcttcctccactccttgcac
tgagagatacaattctatcaatcagtcgtctagaattagtctcactaata
tgtaagtcaaaaatatgcttatgttacacttatttggctgatacattaca
atgtggagagaataagaaattgtaaagttactttcataaactagacattt
gattatatgtgctaaatgtctaggatacaaaacattaacattacatatac
tgaaactaaagatgtgtgggtaggtatacgaggggaagaaagaagtattg
atggtggggga

ctagaggtctttaatttcttcctttgtttctaccctgaccatgttttcat
tgaatagagagttgttcagggtatgtgtggggtttttttttgttgttgtt
gttgttgtttttattgttattgaagtctagccttagtccatggtgatctg
ataggatgcatgggattatttcaatcttgtggtatctgttgaggcttctt
ttgtgaccaattatatggtcaattttgcagatggtaatatgacatgctga
aaaaaaagggatattcttttgtttttgaatgaagtgttccatttatatct
attaatccatttggttcattacctctatgagattcagtgtctttatttag
tttctgtttttataacttctccattggtgagagtggagtggtgaagtctc
ccattttatgtatatggttccacctgtgttttaagcttttgtaaagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_49488259_49489320
seq2: B6Ng01-156P01.b_44_1104

seq1  GAATTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAG  50

seq1  TATTCCTCTTTCTCCACATCCTCGACAGCATCTGCTGTCAACTGAATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTCTTTCTCCACATCCTCGACAGCATCTGCTGTCAACTGAATTAA  100

seq1  CCCTAATACACACTTTTAATTCCAAACAATGACATCTAATTGAGGGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAATACACACTTTTAATTCCAAACAATGACATCTAATTGAGGGAGAG  150

seq1  AGAGAGTAAGGAATCACAGAATGATTTGATAAGATCAGATGCACACAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTAAGGAATCACAGAATGATTTGATAAGATCAGATGCACACAAAT  200

seq1  CTCACAAGAGCAGCACAGGAAAGGGAAGCTGTTTAAGAGGAACGCAGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAAGAGCAGCACAGGAAAGGGAAGCTGTTTAAGAGGAACGCAGGGA  250

seq1  GAGTGTTGGGAGTCAGCTGGGAGCCAGCTCCGTCCATACAGTTCTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTGGGAGTCAGCTGGGAGCCAGCTCCGTCCATACAGTTCTTTTAA  300

seq1  GCAAAGTTCAGCTCAGTGCAGTTCAGTTGAGTTCCCTCTGAGTTCAGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTTCAGCTCAGTGCAGTTCAGTTGAGTTCCCTCTGAGTTCAGGTC  350

seq1  AGTCACTCTGTTCTGTTGCATGAAACCCCTCAGCCCATTGGAAGCTCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTCTGTTCTGTTGCATGAAACCCCTCAGCCCATTGGAAGCTCAGC  400

seq1  ATTTTCACAGCATAGATTTGAGCAGAGATGTCCAACTGACAAATAAGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCACAGCATAGATTTGAGCAGAGATGTCCAACTGACAAATAAGTGG  450

seq1  AGTCATTGCAAATAAATAACCAAGTAGTCGGGGTTTGTGGGTATATATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTGCAAATAAATAACCAAGTAGTCGGGGTTTGTGGGTATATATCT  500

seq1  AGATAAAGGAGACAAACTTATCTAATCTGAGTAGGAACAGTCTCTGAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGGAGACAAACTTATCTAATCTGAGTAGGAACAGTCTCTGAAGG  550

seq1  GGAGCAGTTGTCAGGCTACAAACGACTCAGTGACAAACATTATGGTGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGTTGTCAGGCTACAAACGACTCAGTGACAAACATTATGGTGGGC  600

seq1  AGTTTCTGCTCACACTGTGAACACAGGAAATCCAGAAGAAGGCTTTCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTGCTCACACTGTGAACACAGGAAATCCAGAAGAAGGCTTTCTCA  650

seq1  GTTCCTTCTCTGAACCTCAGCAGAGATGTGAAGGAAGCTTTGCTTTCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTCTCTGAACCTCAGCAGAGATGTGAAGGAAGCTTTGCTTTCATG  700

seq1  GGCTTGAGGCCCTGGGGTCCTCGATTTTTGCTGTGCTCATGTAAGTATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGAGGCCCTGGGGTCCTCGATTTTTGCTGTGCTCATGTAAGTATCA  750

seq1  CACACTTAGTCAGGACTCTGCTCACTCAGGGCTTCCTCCACTCCTTGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTAGTCAGGACTCTGCTCACTCAGGGCTTCCTCCACTCCTTGCAC  800

seq1  TGAGAGATACAATTCTATCAATCAGTCGTCTAGAATTAGTCTCACTAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGATACAATTCTATCAATCAGTCGTCTAGAATTAGTCTCACTAATA  850

seq1  TGTAAGTCAAAAATATGCTTATGTTACACTTATTTGGCTGATACATTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTCAAAAATATGCTTATGTTACACTTATTTGGCTGATACATTACA  900

seq1  ATGTGGAGAGAATAAGAAATTGTAAAGTTACTTTCATAAACTAGACATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAGAGAATAAGAAATTGTAAAGTTACTTTCATAAACTAGACATTT  950

seq1  GAATTATATGTGCTAAAATGTCTAGGATACAAAACAATAACATTACATAT  1000
      | |||||||||||| ||||||||||||||||||||| |||||||||||||
seq2  G-ATTATATGTGCT-AAATGTCTAGGATACAAAACATTAACATTACATAT  998

seq1  ACTGAAACTAAAGATGTGTGGGTAGGTATACGAGGGGAAGAAAGAAGTGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  ACTGAAACTAAAGATGTGTGGGTAGGTATACGAGGGGAAGAAAGAAGTAT  1048

seq1  TGAT-GTGGGGGA  1062
      |||| ||||||||
seq2  TGATGGTGGGGGA  1061


| Home | SequenceCutter | Blast | Download |