BAC Information

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BAC

Clone NameB6Ng01-157A10
Chromosome12 (Build37)
Map Location 7,774,743 - 7,894,652
singlet/doubletdoublet
Overlap geneEG668388
Upstream geneLOC668380
Downstream geneApob, 1110057K04Rik, Gdf7, Hs1bp3, BC106175, Rhob, Slc7a15, LOC100043154, Pum2, F730043H23, Sdc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157A10.bB6Ng01-157A10.g
ACCDH951370DH951371
length3251,037
definitionDH951370|Mus musculus domesticus DNA, BAC clone: B6Ng01-157A10, 5' end.DH951371|Mus musculus domesticus DNA, BAC clone: B6Ng01-157A10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,774,743 - 7,775,073)(7,893,579 - 7,894,652)
sequence
ctaaaagagttagcaaaggacagacaggagttctctgcggctgagagaag
agtgtctccaggaagagttcatgtggatgcacatttgtaggatgtagaga
tcaaacaccaggatgagagtggctagaagaacgtcgggcagaggccgaag
gctaagctgcaatgctgaggagcaaagttcatagcattttccagggcctg
tgacattttcaactctgcccttctagaggatattgtctaacctaaaagaa
gttatgtgctgtgcccccttcattctcatattctctctctctctctctct
ctctctctctctctctctctctctc

gaattcataagctgaacatatttgctttggtttgccttctattttaaact
ttcctctccttcttcttttcctcttcctccgcctcctctccctcctctgt
ctccttctttctaaaaagtatgtggttcatgtaacatagcaccaaaactg
ggggtggtgatattgtgggggggcaaacatcagaaagcttgggctgatac
gttgaaccttttgaccttcagtttggaggcctgaactcttacatgcattc
acgcgactggccaggaagaacgcagcaaaccggaatcttctgcggcaaaa
gctttattgcttacatcttcaggagccagagcgcaagagtgcaagagagc
aagagagcaagagcaagagcaagagcaagagcaagagcaagagcaagagc
aagagcaagagcaagagcaagagcaagagcaagagcaagagcaagagcaa
gagagagcaagaaagcaagaaaaagaacaagaacaagaaagcaagagaga
gaaaaagaatggcaaaaccccgtcccttttaaggagaattatcctccgcc
taggacgtattactccctgattggctgcagcccatcggctcagttgtcat
cacgagaaaggcagaacacatggcgggaaaactgcccctgcacgtgtgca
gattatgtttaccacttagaacacagctgtcagcgccatcttataatggc
aaatgtgagggcggctcccaacactgaacagtgaaaaatttattgtaaaa
atcagttaaattaatgtactgaaccactttgctcctttaagcttttaaat
taagcccatgaaatgcaaaaggggaataggcttagcttataatcttcagt
acatagacccaggggttctaggtatacacccaataaatgcttgctgtgtg
atagttagatgagacatgtatatatgtatatgctttattcataatatgat
gtttgatactaacataaatatgtgattgattatagatgcagatgtagtac
ttttttttttgttgtttggtttcagacaggatctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_7774743_7775073
seq2: B6Ng01-157A10.b_48_378

seq1  GAATTCCTAAAAGAGTTAGCAAAGGACAGACAGGAGTTCTCTGCGGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAAAGAGTTAGCAAAGGACAGACAGGAGTTCTCTGCGGCTGA  50

seq1  GAGAAGAGTGTCTCCAGGAAGAGTTCATGTGGATGCACATTTGTAGGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAGTGTCTCCAGGAAGAGTTCATGTGGATGCACATTTGTAGGATG  100

seq1  TAGAGATCAAACACCAGGATGAGAGTGGCTAGAAGAACGTCGGGCAGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATCAAACACCAGGATGAGAGTGGCTAGAAGAACGTCGGGCAGAGG  150

seq1  CCGAAGGCTAAGCTGCAATGCTGAGGAGCAAAGTTCATAGCATTTTCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAGGCTAAGCTGCAATGCTGAGGAGCAAAGTTCATAGCATTTTCCAG  200

seq1  GGCCTGTGACATTTTCAACTCTGCCCTTCTAGAGGATATTGTCTAACCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTGACATTTTCAACTCTGCCCTTCTAGAGGATATTGTCTAACCTA  250

seq1  AAAGAAGTTATGTGCTGTGCCCCCTTCATTCTCATATTCTCTCTCTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGTTATGTGCTGTGCCCCCTTCATTCTCATATTCTCTCTCTCTCT  300

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  331
      |||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  331


seq1: chr12_7893579_7894652
seq2: B6Ng01-157A10.g_69_1105 (reverse)

seq1  CAGAGAAACCCTGTCTTGAAAAACAAAACACACCAAAAAAAAAAAAAAGT  50
      |||||  | |||||||    |||| ||||      || ||||||||||||
seq2  CAGAG--ATCCTGTCT---GAAACCAAAC------AACAAAAAAAAAAGT  39

seq1  TAACTACATCTGCATTTTTAATTAAATTCAAATTCACAATATTTTAATGG  100
        ||||||||||||| | |||| ||        |||| ||||||  || |
seq2  --ACTACATCTGCATCTATAATCAA--------TCAC-ATATTT--AT-G  75

seq1  TAAGTATTCAAAACATCATAATTATTGAAATTAAAGCATATACATATATA  150
      | |||||   ||||||||| |||| ||||  |||||||||||||||||||
seq2  TTAGTAT--CAAACATCAT-ATTA-TGAA--TAAAGCATATACATATATA  119

seq1  CATGTCTCAATTCTAACCTATCACACAGCAAGCATTTATTGGGTTGTATA  200
      |||||||||  ||||| |||||||||||||||||||||||||| ||||||
seq2  CATGTCTCA--TCTAA-CTATCACACAGCAAGCATTTATTGGG-TGTATA  165

seq1  CCTAGAACCCCTGGGGTCTATTGTACTGAAGATTATAAGCTAAGCCTATT  250
      |||||||||||| ||||||| |||||||||||||||||||||||||||||
seq2  CCTAGAACCCCT-GGGTCTA-TGTACTGAAGATTATAAGCTAAGCCTATT  213

seq1  CCCCTTTTGCATTTCATGGGCTTAATTTAAAAGCTTAAAGGAGCAAAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTTGCATTTCATGGGCTTAATTTAAAAGCTTAAAGGAGCAAAGTG  263

seq1  GTTCAGTACATTAATTTAACTGATTTTTACAATAAATTTTTCACTGTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTACATTAATTTAACTGATTTTTACAATAAATTTTTCACTGTTCA  313

seq1  GTGTTGGGAGCCGCCCTCACATTTGCCATTATAAGATGGCGCTGACAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGGGAGCCGCCCTCACATTTGCCATTATAAGATGGCGCTGACAGCT  363

seq1  GTGTTCTAAGTGGTAAACATAATCTGCACACGTGCAGGGGCAGTTTTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTAAGTGGTAAACATAATCTGCACACGTGCAGGGGCAGTTTTCCC  413

seq1  GCCATGTGTTCTGCCTTTCTCGTGATGACAACTGAGCCGATGGGCTGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTGTTCTGCCTTTCTCGTGATGACAACTGAGCCGATGGGCTGCAG  463

seq1  CCAATCAGGGAGTAATACGTCCTAGGCGGAGGATAATTCTCCTTAAAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCAGGGAGTAATACGTCCTAGGCGGAGGATAATTCTCCTTAAAAGG  513

seq1  GACGGGGTTTTGCCATTCTTTTTCTCTCTCTTGCTTTCTTGTTCTTGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGGGTTTTGCCATTCTTTTTCTCTCTCTTGCTTTCTTGTTCTTGTTC  563

seq1  TTTTTCTTGCTTTCTTGCTCTCTCTTGCTCTTGCTCTTGCTCTTGCTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTGCTTTCTTGCTCTCTCTTGCTCTTGCTCTTGCTCTTGCTCTT  613

seq1  GCTCTTGCTCTTGCTCTTGCTCTTGCTCTTGCTCTTGCTCTTGCTCTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGCTCTTGCTCTTGCTCTTGCTCTTGCTCTTGCTCTTGCTCTTGC  663

seq1  TCTTGCTCTTGCTCTTGCTCTCTTGCTCTCTTGCACTCTTGCGCTCTGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTCTTGCTCTTGCTCTCTTGCTCTCTTGCACTCTTGCGCTCTGGC  713

seq1  TCCTGAAGATGTAAGCAATAAAGCTTTTGCCGCAGAAGATTCCGGTTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAGATGTAAGCAATAAAGCTTTTGCCGCAGAAGATTCCGGTTTGC  763

seq1  TGCGTTCTTCCTGGCCAGTCGCGTGAATGCATGTAAGAGTTCAGGCCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTTCTTCCTGGCCAGTCGCGTGAATGCATGTAAGAGTTCAGGCCTCC  813

seq1  AAACTGAAGGTCAAAAGGTTCAACGTATCAGCCCAAGCTTTCTGATGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAAGGTCAAAAGGTTCAACGTATCAGCCCAAGCTTTCTGATGTTT  863

seq1  GCCCCCCCACAATATCACCACCCCCAGTTTTGGTGCTATGTTACATGAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCCCACAATATCACCACCCCCAGTTTTGGTGCTATGTTACATGAAC  913

seq1  CACATACTTTTTAGAAAGAAGGAGACAGAGGAGGGAGAGGAGGCGGAGGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACTTTTTAGAAAGAAGGAGACAGAGGAGGGAGAGGAGGCGGAGGA  963

seq1  AGAGGAAAAGAAGAAGGAGAGGAAAGTTTAAAATAGAAGGCAAACCAAAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAAAGAAGAAGGAGAGGAAAGTTTAAAATAGAAGGCAAACCAAAG  1013

seq1  CAAATATGTTCAGCTTATGAATTC  1074
      ||||||||||||||||||||||||
seq2  CAAATATGTTCAGCTTATGAATTC  1037


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