BAC Information

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BAC

Clone NameB6Ng01-157C03
Chromosome12 (Build37)
Map Location 82,956,463 - 83,142,109
singlet/doubletdoublet
Overlap genePcnx
Upstream gene4933426M11Rik, Sfrs5, Slc10a1, Smoc1, Slc8a3, LOC100042143, LOC100042148, EG214321, Hspe1-ps2, Adam4, 1810020G14Rik, Synj2bp, Adam21, Med6, Ttc9, LOC100041821, Map3k9
Downstream geneSipa1l1, LOC432675, EG666911, Rgs6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157C03.bB6Ng01-157C03.g
ACCDH951452DH951453
length1,041279
definitionDH951452|Mus musculus domesticus DNA, BAC clone: B6Ng01-157C03, 5' end.DH951453|Mus musculus domesticus DNA, BAC clone: B6Ng01-157C03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,956,463 - 82,957,506)(83,141,831 - 83,142,109)
sequence
gaattctcaatatttagggagtttcacaacagcctacgtacttccctttt
cctgctctggaagtattggatgtgaattaaaggaaagtgagattttcccc
ccatacacacaccaccccccaataacatactctcaagatgacacaaaacc
atagtgaggattactgaggtggttagtctcaagaaacacatgcctttatt
tttcttttgacagagtctcattatatagaccaagctggcctcaaacttac
agagatccacctacctttgcctaagttttgtgattaaaggtgtgcgccac
tgggcctggctaaaactcaccttataaagtatgtatcccgtggaaacaaa
gctctaaaaaaaaaaaaaaaaactgactgaactgtgatttccaagaatga
tcatcttccggggagtaagaaaaccacttctttttgtttatcaagctcca
tatccagatacttgtgtttctcgttacattgtataggtttggggactctc
ctcccctccccacttttgacatttatctgcctgtgacataaagtggcaca
tagaaatagctaaaaagtgaactaggggataattctagggtacttctctc
cctaattcttttcagtctatttcatagcttttccttttttgaactgatct
tctagaactgctggagtgtttttaaatatagaagtaccaaatatatggtt
aaaaaaatagatctgcattcctgattggaaagtcctgaccctgtgctttc
tgcagcccgtctacaccgagtgcattgatctttaacagctttttgatggg
cacctggggcacactaaagagcaccctgccagctggggcacactgaggag
cacctggggcacaccgaggagcaccctgccagctggggcacactgaggag
caccctgccagctggggcacactgaggagcaccctgccagctgggcacac
tgaggagcactttgccattgagcatcaaggaatgtggttcacttggaggc
acagaaagtagcagacaattaagtgttagtgagtgggaggg
cagtgagccttgacagcaacatggcttccacggaaggaggatatcactgg
ccagaaatcagagacttggctggggatgcagcttcctctctaacagcctg
agactgtctcaaaacagaacgaaccaaaccagcgacaacagcaacacaag
cacagaggtaaaattcaggggcttgggaaggagagaatgtggtgacttag
actagaaacctttatatctagtttactgcacagtagaaaaggaccagagg
ggtgtgtgtgtgtgtgtgtgtgtgtgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_82956463_82957506
seq2: B6Ng01-157C03.b_45_1085

seq1  GAATTCTCAATATTTAGGGAGTTTCACAACAGCCTACGTACTTCCCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAATATTTAGGGAGTTTCACAACAGCCTACGTACTTCCCTTTT  50

seq1  CCTGCTCTGGAAGTATTGGATGTGAATTAAAGGAAAGTGAGATTTTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCTGGAAGTATTGGATGTGAATTAAAGGAAAGTGAGATTTTCCCC  100

seq1  CCATACACACACCACCCCCCAATAACATACTCTCAAGATGACACAAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACACACACCACCCCCCAATAACATACTCTCAAGATGACACAAAACC  150

seq1  ATAGTGAGGATTACTGAGGTGGTTAGTCTCAAGAAACACATGCCTTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGAGGATTACTGAGGTGGTTAGTCTCAAGAAACACATGCCTTTATT  200

seq1  TTTCTTTTGACAGAGTCTCATTATATAGACCAAGCTGGCCTCAAACTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTGACAGAGTCTCATTATATAGACCAAGCTGGCCTCAAACTTAC  250

seq1  AGAGATCCACCTACCTTTGCCTAAGTTTTGTGATTAAAGGTGTGCGCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCCACCTACCTTTGCCTAAGTTTTGTGATTAAAGGTGTGCGCCAC  300

seq1  TGGGCCTGGCTAAAACTCACCTTATAAAGTATGTATCCCGTGGAAACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTGGCTAAAACTCACCTTATAAAGTATGTATCCCGTGGAAACAAA  350

seq1  GCTCTAAAAAAAAAAAAAAAAACTGACTGAACTGTGATTTCCAAGAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAAAAAAAAAAAAAAAAACTGACTGAACTGTGATTTCCAAGAATGA  400

seq1  TCATCTTCCGGGGAGTAAGAAAACCACTTCTTTTTGTTTATCAAGCTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTCCGGGGAGTAAGAAAACCACTTCTTTTTGTTTATCAAGCTCCA  450

seq1  TATCCAGATACTTGTGTTTCTCGTTACATTGTATAGGTTTGGGGACTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGATACTTGTGTTTCTCGTTACATTGTATAGGTTTGGGGACTCTC  500

seq1  CTCCCCTCCCCACTTTTGACATTTATCTGCCTGTGACATAAAGTGGCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTCCCCACTTTTGACATTTATCTGCCTGTGACATAAAGTGGCACA  550

seq1  TAGAAATAGCTAAAAAGTGAACTAGGGGATAATTCTAGGGTACTTCTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATAGCTAAAAAGTGAACTAGGGGATAATTCTAGGGTACTTCTCTC  600

seq1  CCTAATTCTTTTCAGTCTATTTCATAGCTTTTCCTTTTTTGAACTGATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATTCTTTTCAGTCTATTTCATAGCTTTTCCTTTTTTGAACTGATCT  650

seq1  TCTAGAACTGCTGGAGTGTTTTTAAATATAGAAGTACCAAATATATGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAACTGCTGGAGTGTTTTTAAATATAGAAGTACCAAATATATGGTT  700

seq1  AAAAAAATAGATCTGCATTCCTGATTGGAAAGTCCTGACCCTGTGCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATAGATCTGCATTCCTGATTGGAAAGTCCTGACCCTGTGCTTTC  750

seq1  TGCAGCCCGTCTACACCGAGTGCATTGATCTTTAACAGCTTTTTGATGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCCGTCTACACCGAGTGCATTGATCTTTAACAGCTTTTTGATGGG  800

seq1  CACCTGGGGCACACTAAAGAGCACCCTGCCAGCTGGGGCACACTGAGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGGGCACACTAAAGAGCACCCTGCCAGCTGGGGCACACTGAGGAG  850

seq1  CACCTGGGGCACACCGAGGAGCACCCTGCCAGCTGGGGCACACTGAGGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGGGCACACCGAGGAGCACCCTGCCAGCTGGGGCACACTGAGGAG  900

seq1  CACCCTGCCAGCTGGGGCACACTGAGGAGCACCCTGCCAGCTGGGGCACA  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CACCCTGCCAGCTGGGGCACACTGAGGAGCACCCTGCCAGCT-GGGCACA  949

seq1  CTGAGGAGCACTTTGCCATTGAGCATCAAGGAATGTGGTTCACTTGGAGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAGCACTTTGCCATTGAGCATCAAGGAATGTGGTTCACTTGGAGG  999

seq1  CACAGAAAGTAGCAGACAATTAAGTGCTAAGTGAGTGGGGAGGG  1044
      |||||||||||||||||||||||||| | ||||||| |||||||
seq2  CACAGAAAGTAGCAGACAATTAAGTG-TTAGTGAGT-GGGAGGG  1041

seq1: chr12_83141831_83142109
seq2: B6Ng01-157C03.g_73_351 (reverse)

seq1  TCACACACACACACACACACACACACACCCCTCTGGTCCTTTTCTACTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACACACACACACACACACACACACCCCTCTGGTCCTTTTCTACTGT  50

seq1  GCAGTAAACTAGATATAAAGGTTTCTAGTCTAAGTCACCACATTCTCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAAACTAGATATAAAGGTTTCTAGTCTAAGTCACCACATTCTCTCC  100

seq1  TTCCCAAGCCCCTGAATTTTACCTCTGTGCTTGTGTTGCTGTTGTCGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAAGCCCCTGAATTTTACCTCTGTGCTTGTGTTGCTGTTGTCGCTG  150

seq1  GTTTGGTTCGTTCTGTTTTGAGACAGTCTCAGGCTGTTAGAGAGGAAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTTCGTTCTGTTTTGAGACAGTCTCAGGCTGTTAGAGAGGAAGCT  200

seq1  GCATCCCCAGCCAAGTCTCTGATTTCTGGCCAGTGATATCCTCCTTCCGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCCCAGCCAAGTCTCTGATTTCTGGCCAGTGATATCCTCCTTCCGT  250

seq1  GGAAGCCATGTTGCTGTCAAGGCTCACTG  279
      |||||||||||||||||||||||||||||
seq2  GGAAGCCATGTTGCTGTCAAGGCTCACTG  279