BAC Information

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BAC

Clone NameB6Ng01-157G08
Chromosome12 (Build37)
Map Location 63,498,581 - 63,499,111
singlet/doubletsinglet
Overlap genenone
Upstream geneNanog-ps2, Lrfn5, LOC665699, LOC665707, LOC100040403, LOC665713, LOC622746
Downstream geneLOC100040438, 1700047L15Rik, Tspyl-ps, EG665741, EG382606
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157G08.bB6Ng01-157G08.g
ACCDH951641DH951642
length1,139530
definitionDH951641|Mus musculus domesticus DNA, BAC clone: B6Ng01-157G08, 5' end.DH951642|Mus musculus domesticus DNA, BAC clone: B6Ng01-157G08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcccaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggtctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctcccaa
tggaggagctagagaaagtacccaaggagctaaagggatctcaaccctat
aggtggacacatatgactacagtaccctgagctctgactctagctgcata
tgtatcaaagatgctagtcgcatcactgaagagaggcatgaaccgacttg
gttgccgatcaggacccaggccaaggggaatgtgtgtag
gaattcagtggagcatatatatgtggatattcagctattcatctaaacat
ctttgatcattcaaaattgatattcaaatactcacgggaggaaatatgga
cacaaagggtggagcagaagctgaaagaaaggccatcctgagactgccct
cttgggcattgggctatacacagacagtctggtcatcagtcaagctgagg
tatggaaccctgggacctggtggtgataattcaccaacatgggatggtaa
tcgttccctcatgtcttctggaactctggtccctgtcgaagttaccgccc
ccccccccacatccccgccccataggagaagcatggcttatagtcatgta
gacaatgtcccaagcttctgaccatcaggctagactcctcccagttacct
agcaacagtaaagataacagcacaccataagaggggctgcttggccccac
ctcattctctttcttcccttacactctgcttactttctcccctcccctcc
cctccccccttcccttccttcccctcccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_63498581_63499111
seq2: B6Ng01-157G08.g_69_598

seq1  GAATTCAGTGGAGCATATATATGTGGATATTCAGCTATTCATCTAAACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGGAGCATATATATGTGGATATTCAGCTATTCATCTAAACAT  50

seq1  CTTTGATCATTCAAAATTGATATTCAAATACTCACGGGAGGAAATATGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATCATTCAAAATTGATATTCAAATACTCACGGGAGGAAATATGGA  100

seq1  CACAAAGGGTGGAGCAGAAGCTGAAAGAAAGGCCATCCTGAGACTGCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGGGTGGAGCAGAAGCTGAAAGAAAGGCCATCCTGAGACTGCCCT  150

seq1  CTTGGGCATTGGGCTATACACAGACAGTCTGGTCATCAGTCAAGCTGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCATTGGGCTATACACAGACAGTCTGGTCATCAGTCAAGCTGAGG  200

seq1  TATGGAACCCTGGGACCTGGTGGTGATAATTCACCAACATGGGATGGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAACCCTGGGACCTGGTGGTGATAATTCACCAACATGGGATGGTAA  250

seq1  TCGTTCCCTCATGTCTTCTGGAACTCTGGTCCCTGTCGAAGTTACCGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCGTTCCCTCATGTCTTCTGGAACTCTGGTCCCTGTCGAAGTTACCG-CC  299

seq1  CCCCCCCCCACATCCCCGCCCCATAGGAGAAGCATGGCTTATAGTCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCACATCCCCGCCCCATAGGAGAAGCATGGCTTATAGTCATGT  349

seq1  AGACAATGTCCCAAGCTTCTGACCATCAGGCTAGACTCCTCCCAGTTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATGTCCCAAGCTTCTGACCATCAGGCTAGACTCCTCCCAGTTACC  399

seq1  TAGCAACAGTAAAGATAACAGCACACCATAAGAGGGGCTGCTTGGCCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACAGTAAAGATAACAGCACACCATAAGAGGGGCTGCTTGGCCCCA  449

seq1  CCTCATTCTCTTTCTTCCCTTACACTCTGCTTACTTTCTCCCCTCCCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTCTCTTTCTTCCCTTACACTCTGCTTACTTTCTCCCCTCCCCTC  499

seq1  CCCTCCCCCCTTCCCTTCCTTCCCCTCCCCT  531
      |||||||||||||||||||||||||||||||
seq2  CCCTCCCCCCTTCCCTTCCTTCCCCTCCCCT  530