MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-161H05
Chromosome	12 (Build37)
Map Location	41,230,263 - 41,231,452
singlet/doublet	singlet
Overlap gene	Dock4
Upstream gene	LOC100043148, Arl4a, LOC100043606, Scin, Gm889, Ifrd1, EG629820, Zfp277
Downstream gene	LOC638487, LOC100043157, LOC100043162, Lrrn3
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100043148 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043148
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Arl4a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11861 MGI:99437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100043606 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043606
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Scin (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20259 MGI:1306794
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm889 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380755 MGI:2685735
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ifrd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15982 MGI:1316717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG629820 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629820 MGI:3647211
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Zfp277 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:246196 MGI:1890393
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Dock4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238130 MGI:1918006
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC638487 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:638487
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 87 ESTs, 5 Proteins pseudo : _no_value

name	LOC100043157 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043157
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100043162 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Lrrn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16981 MGI:106036
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arl4a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87252728 GeneID:11861 MGI:99437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 4A transcript_id : NM_001039515.1

name	Arl4a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87252732 GeneID:11861 MGI:99437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 4A transcript_id : NM_007487.3

name	LOC100043606 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262926 GeneID:100043606
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100043606 transcript_id : XM_001480837.1

name	Scin (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677870 GeneID:20259 MGI:1306794
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : scinderin transcript_id : NM_009132.1

name	Gm889 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371522 GeneID:380755 MGI:2685735
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 889, (NCBI) transcript_id : NM_001033437.2

name	Ifrd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305178 GeneID:15982 MGI:1316717
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interferon-related developmental regulator 1 transcript_id : NM_013562.1

name	EG629820 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392491 GeneID:629820 MGI:3647211
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : predicted gene, EG629820 transcript_id : XM_901881.2

name	Zfp277 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802367 GeneID:246196 MGI:1890393
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 277 transcript_id : NM_172575.2

name	Zfp277 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375970 GeneID:246196 MGI:1890393
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 277 transcript_id : NM_178845.2

name	Dock4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62543570 GeneID:238130 MGI:1918006
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dedicator of cytokinesis 4 transcript_id : NM_172803.2

name	LOC100043157 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262852 GeneID:100043157
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043157 transcript_id : XM_001479647.1

name	Lrrn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402513 GeneID:16981 MGI:106036
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat protein 3, neuronal transcript_id : NM_010733.2

name	Arl4a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87252729 CCDS:CCDS25890.1 GeneID:11861 MGI:99437
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003924 - GTPase activity [Evidence TAS]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 note : ADP-ribosylation-like 4 product : ADP-ribosylation factor-like 4 protein_id : NP_001034604.1

name	Arl4a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680730 CCDS:CCDS25890.1 GeneID:11861 MGI:99437
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003924 - GTPase activity [Evidence TAS]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 note : ADP-ribosylation-like 4 product : ADP-ribosylation factor-like 4 protein_id : NP_031513.1

name	LOC100043606 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262927 GeneID:100043606
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480887.1

name	Scin (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677871 CCDS:CCDS25891.1 GeneID:20259 MGI:1306794
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0051016 - barbed-end actin filament capping [Evidence IEA] codon_start : 1 exception : mismatches in translation function : actin binding protein product : scinderin protein_id : NP_033158.1

name	Gm889 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701953 CCDS:CCDS25892.1 GeneID:380755 MGI:2685735
definition	codon_start : 1 product : hypothetical protein LOC380755 protein_id : NP_001028609.1

name	Ifrd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305179 CCDS:CCDS25893.1 GeneID:15982 MGI:1316717
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0007527 - adult somatic muscle development [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0042692 - muscle cell differentiation [Evidence IMP] codon_start : 1 exception : mismatches in translation note : nerve growth factor-inducible protein PC4; TPA-induced sequence 7; interferon-like product : interferon-related developmental regulator 1 protein_id : NP_038590.1

name	EG629820 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392492 GeneID:629820 MGI:3647211
definition	codon_start : 1 product : hypothetical protein protein_id : XP_906974.2

name	Zfp277 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281921 CCDS:CCDS25894.1 GeneID:246196 MGI:1890393
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2 product : zinc finger protein 277 isoform 2 protein_id : NP_849173.1

name	Zfp277 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369820 GeneID:246196 MGI:1890393
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1 product : zinc finger protein 277 isoform 1 protein_id : NP_766163.1

name	Dock4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62543571 CCDS:CCDS25895.1 GeneID:238130 MGI:1918006
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0051020 - GTPase binding [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA] codon_start : 1 product : dedicator of cytokinesis 4 protein_id : NP_766391.2

name	LOC100043157 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262853 GeneID:100043157
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479697.1

name	Lrrn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859578 CCDS:CCDS25896.1 GeneID:16981 MGI:106036
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : leucine rich repeat protein 3, neuronal protein_id : NP_034863.1

name	LOC100043148 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043148
definition	number : 1 pseudo : _no_value

name	LOC100043148 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043148
definition	number : 2 pseudo : _no_value

name	LOC100043148 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043148
definition	number : 3 pseudo : _no_value

name	LOC100043162 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043162
definition	number : 6 pseudo : _no_value

name	LOC100043162 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043162
definition	number : 5 pseudo : _no_value

name	LOC100043162 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043162
definition	number : 4 pseudo : _no_value

name	LOC100043162 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043162
definition	number : 3 pseudo : _no_value

name	LOC100043162 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043162
definition	number : 2 pseudo : _no_value

name	LOC100043162 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043162
definition	number : 1 pseudo : _no_value

name	LOC638487 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149262928 GeneID:638487
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 87 ESTs, 5 Proteins product : similar to protein phosphatase 2A inhibitor-2 I-2PP2A pseudo : _no_value transcript_id : XR_034872.1

clone name	MSMg01-068F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193E01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-372C14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-051D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539L16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-338L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480I06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-381B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291P22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-161H05.b	B6Ng01-161H05.g
ACC	DH954556	DH954557
length	1,170	1,184
definition	DH954556\|Mus musculus domesticus DNA, BAC clone: B6Ng01-161H05, 5' end.	DH954557\|Mus musculus domesticus DNA, BAC clone: B6Ng01-161H05, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcctcctaggaaaactaagacctgatccgcatggggctagcaaaag acagaagtaaaacactcatgctttatactttgccctagagcaggagatgg aagacttgcaatgttgagagtccccaacgcatttgaagcacatcaccacc accccatccccatcgctgcaatgtccagaccacaccaggatccaatgcag ggctactgagccctgtaatacttctattttaacgtgctgaggtagctcgt actgcttccacaacagttgttctaatccatgttcctaccgacaacatcca agaatcctcttttctccacagcctctcgggagcttctgagtctgtcattg tcacactgctcattcttacaggatgaggcgtttatattgcattttcctgg tcattactgacattcagaaactttccacatgctccatttgtatccttttg tggggaagtctatctgaaccgattgcctattctccttgaacttgctttgc tactgaattccttgagatccttctaagtttccttggccacacggcagaca cagagtttgcaaaccttttccctgcaggatgtcacaactcctgtcacttc ctttgctgtgcaaaagtctttgcagtttgataaaaacccatttgcttatt ttcacttttgatttctgtgctttgaggatcttaaaaaaaaaaaaaaaaaa agaaaactccttgcccctcccgtgtccagacccatggatctactttttga gattcagccttggaagctaagctgttgagttgttgatgtcaattcttaag attaatattcttgcattttctgggcactccattgtttcatggaaataaaa cacgtttggtatttaggttgcatagaattctcaaaagacacatgggaaat agagtcgtgaagtttttattcaagactctataccctccgatttcctaaga agaaatagacacaaggaaaaaaaaggtatattacctgatgcatttaaaaa ttaagagaatgcactcataagattttgttttctatttcttctcttttgct tgctttctgttcttctatggcagcactcacaaatctttgagaaaacaggc agcttgggagatctttaagcttgttggcaccctccaagcttaagaccctg gagctactgcggagatgtgt	gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt tacgaggtaagtctgatcttgaactttctaaggaaattcaagacagtcta tcagaagtaaagtggaatatgtttggccttgaattttttctagtgttaga agcccttttgttccttttcacatgttatcaagtggttaaggcagggcgga ttctggatgaaattcaggacaagctatcagaagtaaagtggggagagaga gtaggaacaaagaggaaatatggtacacaaaataagtatacaggcctttc caagggtcttgaacccgaggaaaagttaaggttaggtaggaatacctgga gagagattagaagaaaaagaggaaaaagggaaaagaagaaagatcaatta gcggaggtctctaggaaaaggagcctgtgctcatcgctggatgggctcgg ggagccagctcttggtagctctgaatcagatgatgaattctcctctgaag aaacagactgggaggaagaagcagctcattatgagaaaaaagggtaccag tcaggtaaagtgctagctaatcagttaaggaagccaaaagcggctggcga aggccagtttgctgattggcctcagggcagtcggcttcaaggtccgccct atgcggagtccccgccctgcgtagtgcgtcagcaatgcgcagagagatgc gcagagaggcaatgcgcagagaggcagtgcgcagagaggcagtgcgcaga ctcattcattcccagagaggaacaaaggaaaatacacaggcatttccggt ctttgaaaggagccgagggtgggcgtgtccacgctccggtagaatactta caaattaaaggaatttgccgagtcggtccgtaaatacggaaccaatgcta atttttaccttgggtgcagtttagacaggcttgccggctatggcacttac tcctgccgactggcaaacgggtgtaaagccgctcctccctagtatgggca aaatttatggaatggaagagcgctttgcacgagctgccaagcgcaggccc ggagcaatcgcagcttgcttgacccgagctaaaagatggacttttgactg ttacggtcaggagcttattcgctgatacgacaactacattgggagcctat agcccagattctttcccggctattgaagcctgct
quality values	Open. Hide. 42 28 24 33 47 61 53 52 53 53 50 47 45 50 47 50 50 50 55 61 47 50 49 61 55 23 14 24 15 21 20 18 12 25 36 55 61 55 55 61 61 61 59 61 59 59 59 59 59 59 61 59 59 59 61 59 59 59 59 59 55 59 61 59 59 59 59 52 59 61 59 55 59 59 59 59 59 59 61 61 61 61 59 61 59 59 59 41 59 59 59 59 59 61 61 59 59 59 61 61 59 59 59 59 59 61 61 61 59 59 59 59 61 59 59 59 61 59 55 59 59 59 59 59 59 59 59 59 59 59 59 61 59 59 59 59 59 59 59 59 59 59 61 59 52 59 59 59 61 61 59 61 61 61 61 59 61 61 59 61 61 59 61 59 59 59 59 59 59 49 59 61 61 59 59 59 59 59 61 61 59 59 59 52 59 59 59 44 59 59 59 59 59 59 52 59 61 52 52 49 59 61 59 61 59 61 59 59 59 52 59 61 59 59 61 52 52 52 59 59 59 59 61 59 59 59 61 61 59 59 59 59 59 52 59 61 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 61 61 61 59 61 61 61 61 59 61 59 59 59 59 59 59 59 61 59 59 61 59 59 59 59 59 59 59 59 61 61 61 59 59 59 59 59 59 52 61 61 59 59 61 59 59 59 59 59 59 52 61 59 59 59 61 61 61 61 59 61 61 61 59 59 59 52 59 59 59 61 61 61 61 61 61 59 59 55 55 61 61 61 61 55 55 61 61 52 55 55 61 61 55 55 52 55 55 61 55 55 52 55 52 61 61 61 52 55 55 52 55 55 61 61 55 61 61 55 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 55 61 55 55 61 61 61 61 61 61 61 61 61 55 55 55 61 55 61 55 55 61 55 55 49 55 55 61 55 50 61 61 61 61 61 61 61 61 61 55 61 55 55 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 53 61 61 61 61 53 50 61 61 50 61 61 53 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 47 61 61 61 61 61 61 53 61 61 61 61 61 61 57 57 57 57 53 53 53 50 53 47 53 47 57 52 53 47 47 52 53 53 53 52 57 45 53 53 57 53 53 45 47 47 53 57 57 57 57 57 53 57 57 57 57 53 50 36 57 39 27 47 38 53 50 53 50 57 57 57 57 57 47 57 45 53 50 52 57 57 57 53 53 57 47 57 53 57 53 34 41 52 45 43 47 53 33 38 53 57 57 47 57 45 47 43 47 53 46 52 45 42 45 53 52 53 45 53 52 53 50 52 57 57 57 53 52 50 38 39 57 57 52 52 27 53 43 57 57 53 52 45 42 53 57 57 43 37 32 53 50 50 57 52 52 53 36 53 34 21 40 34 35 28 57 57 57 57 57 57 57 57 57 57 57 57 57 53 53 53 53 37 24 53 25 14 46 31 41 53 52 29 27 29 20 57 38 32 40 52 53 38 37 31 42 29 53 34 5 5 8 8 5 8 12 11 16 16 39 33 28 30 31 40 21 53 57 57 29 31 44 25 29 14 33 34 28 33 41 37 30 41 33 28 26 33 25 41 33 37 31 21 33 34 26 6 33 24 31 24 27 33 28 13 21 28 41 20 32 25 29 18 46 31 41 38 17 9 14 31 23 26 7 32 38 35 35 35 29 22 38 33 26 29 24 29 28 51 51 30 24 19 24 51 18 51 14 30 29 39 31 31 39 25 31 8 47 29 35 24 31 29 15 23 46 25 18 29 47 47 21 6 6 22 26 29 46 8 18 11 11 26 29 46 51 35 12 36 18 28 28 23 22 28 28 17 32 25 17 33 33 15 27 20 39 41 28 19 13 10 8 16 7 18 22 41 7 39 41 18 21 29 18 27 26 23 36 31 18 29 23 34 9 7 39 51 46 17 20 16 27 10 5 11 8 28 43 14 18 7 8 9 5 15 51 28 9 5 8 4 6 19 38 29 15 22 18 24 28 13 40 10 12 17 38 12 9 8 14 24 16 8 24 6 9 22 32 23 38 31 51 38 51 39 30 8 12 18 6 11 9 27 28 19 29 24 22 26 26 15 27 15 16 29 38 28 26 38 38 32 36 8 10 32 21 6 6 13 10 5 11 15 6 7 15 16 17 7 16 8 23 5 17 4 42 44 14 19 12 44 44 7 29 12 10 7 39 24 21 14 21 28 7 21 23 30 44 22 27 19 17 31 7 11 22 42 22 5 5 9 6 5 5 7 4 5 5 11 11 17 27 9 17 18 29 13 26 12 7 5 10 13 30 18 12 22 26 33 23 10 11 6 11 33 5 4 3 11 3 11 10 23 15 11 5 25 6 21 5 14 4 4 3 4 3 28 12 12 14 12 21 5 9 16 5 9 7 23 4 6 7 26 7 7 3 4 3 8 5 4 4 3 5 8 5 6 13 14 8 3 15 5 8 18 4 5 16 10 10 18 3 4 3 4 3 3 5 4 3 6 4	Open. Hide. 55 47 24 33 37 19 11 11 20 15 21 43 41 52 52 40 30 37 49 61 61 61 61 61 61 59 59 59 59 59 59 59 59 59 61 59 59 59 59 59 59 59 59 59 61 59 59 59 55 55 37 41 59 37 59 52 61 59 59 59 59 59 59 59 61 61 61 59 59 59 59 59 59 59 61 61 61 61 59 59 59 59 61 59 59 59 59 59 59 52 52 59 61 59 59 59 59 61 61 61 61 61 59 52 61 61 59 61 59 61 61 61 59 61 59 61 59 61 61 61 61 61 61 61 61 61 59 61 59 59 59 59 59 59 61 61 61 61 61 61 59 59 59 59 61 59 59 59 59 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 59 59 59 61 61 59 59 61 59 61 61 59 59 59 61 59 61 61 61 61 61 61 59 59 59 61 59 59 61 61 61 59 61 59 59 61 55 59 59 59 59 59 59 61 61 59 59 59 59 61 61 61 61 61 59 52 61 61 59 61 59 59 59 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 61 61 61 61 59 59 59 52 61 59 61 61 59 55 61 59 61 61 61 59 61 61 59 59 59 59 59 55 59 59 59 59 59 61 61 55 61 55 55 61 55 61 55 61 61 55 55 52 55 55 61 61 61 61 61 55 61 55 55 61 61 55 52 61 52 55 61 61 55 61 55 55 55 55 55 55 61 55 61 61 55 61 55 55 52 55 55 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 50 55 61 55 55 55 61 61 61 61 61 61 61 61 61 61 61 55 61 55 55 55 61 61 61 61 55 61 61 61 55 61 61 61 61 55 61 61 61 61 61 61 53 52 61 61 50 50 61 53 61 61 61 61 61 61 61 61 61 50 53 53 45 52 53 61 61 61 61 61 47 47 61 61 61 53 61 61 53 53 61 61 61 47 61 61 53 61 61 61 61 53 53 61 53 50 53 61 61 61 61 61 61 61 61 61 61 53 45 61 53 61 53 50 52 53 52 52 53 61 61 61 61 61 61 61 61 61 61 53 61 61 61 53 50 45 53 53 53 57 47 47 57 43 57 57 57 53 57 53 53 57 53 50 53 53 53 45 47 53 47 53 57 53 50 53 47 47 42 42 47 42 47 39 40 45 53 57 45 45 50 53 45 43 57 53 53 57 53 37 32 57 52 53 40 53 52 52 47 53 52 47 30 30 37 53 53 50 38 46 36 53 34 37 52 39 47 53 53 47 37 52 53 33 53 53 52 32 42 46 39 24 47 19 47 43 38 47 57 50 52 37 47 53 40 45 32 34 26 29 57 52 52 38 31 41 41 37 50 31 37 53 50 52 37 57 47 47 23 40 47 57 16 53 53 42 53 57 41 50 38 50 44 39 37 39 53 16 37 36 57 57 57 34 33 57 50 33 53 36 37 40 42 33 27 53 24 33 38 50 30 27 52 38 33 44 50 38 24 41 48 30 52 15 57 53 36 31 36 42 29 31 32 20 34 20 53 27 14 14 23 30 40 37 37 32 47 35 21 53 28 45 39 37 23 27 21 17 29 33 33 44 34 24 53 22 48 33 32 27 28 24 40 44 33 33 37 29 7 40 28 48 40 18 41 48 44 14 44 53 43 51 39 29 30 46 28 47 18 30 25 30 30 30 39 30 24 48 39 47 30 25 29 23 17 20 12 13 11 31 13 15 15 46 29 39 38 29 43 19 31 25 46 17 13 12 45 15 29 17 31 16 13 45 14 32 18 36 27 14 38 39 34 29 30 34 29 20 24 48 20 48 25 34 25 29 32 26 31 11 22 19 31 22 11 24 35 28 35 33 33 17 33 19 17 30 7 26 25 6 6 9 15 12 41 12 11 39 14 13 43 14 18 29 18 25 10 33 27 11 23 35 43 20 14 13 20 18 26 26 21 15 34 19 22 17 14 12 19 25 21 13 51 51 51 6 7 23 34 12 22 8 30 7 7 8 10 20 12 15 41 9 21 18 12 12 12 27 31 27 43 20 29 20 22 9 22 11 10 8 7 11 36 8 10 6 15 8 28 21 28 22 21 9 21 14 36 13 20 23 28 24 29 9 9 18 12 12 24 34 10 29 23 10 23 38 26 18 33 25 13 26 15 13 12 9 24 44 23 6 6 17 13 6 11 17 30 26 6 15 35 22 7 14 8 7 14 19 21 15 14 15 16 30 26 15 8 8 13 7 8 19 18 23 44 16 21 4 9 16 11 25 6 17 29 20 6 4 6 6 5 5 4 4 4 18 11 14 34 26 7 8 12 5 25 14 30 7 8 4 16 16 12 12 18 9 8 5 13 11 16 14 8 3 2 2 4 7 8 3 3 8 21 6 5 10 9 5 12 4 9 22 27 35 23 13 26 11 26 12 9 17 24 4 13 14 14 5 2 4 7 16 11 15 16 16 7 4 5 3 3 3 4 5 16 7 4 3 6 17 8 5 22 8 9 6 17 3 1 4 17 24 8 7 4 5 7 10 5 6 6 15 12 12 6 7 3 8 8 12 6 9 14 6 11 4 4 5 18 5 6 5 6 8 4 18 5 16 9 12 6 4 3 1

Alignment Information

BAC End 1

BAC End 2

seq1: chr12_41230263_41231452
seq2: B6Ng01-161H05.b_48_1217 (reverse)

seq1  ACACATCTCCGCAGTTAGCCTCCCGAGGCTCTGAGCTTTGGGAGGTTGCC  50
      |||||||||||||| ||| |||| | | || | |||||  ||||| ||||
seq2  ACACATCTCCGCAG-TAG-CTCCAGGGTCT-TAAGCTT--GGAGGGTGCC  45

seq1  AACAAGGCTTTAAAGGAATCCTTCCAAAGCTGCCTTTGTTTCTCAAAGAT  100
      ||||||   ||||||  |||  ||| ||||||||| | ||||||||||||
seq2  AACAAG--CTTAAAG--ATC--TCCCAAGCTGCCTGT-TTTCTCAAAGAT  88

seq1  TTGTGAGGTGCTGCCATAGAGAGACAGAAAAGCAAAGCAAAAGAGAAGAA  150
      |||||| |||||||||||||   |||| ||||| ||||||||||||||||
seq2  TTGTGA-GTGCTGCCATAGAAGAACAG-AAAGC-AAGCAAAAGAGAAGAA  135

seq1  ATAGGAAAACAAAATTCTTATGAGTGCATGTCTCTTTATTTTTTTAAATG  200
      ||| |||||||||| |||||||||||||| |||||| |  ||||||||||
seq2  ATA-GAAAACAAAA-TCTTATGAGTGCAT-TCTCTTAA--TTTTTAAATG  180

seq1  CATCAGGTAATATAACTTTTTTTTCCTTGGTGTCTATTTCTTCTTAGGAA  250
      |||||||||||||| ||||||||||||| |||||||||||||||||||||
seq2  CATCAGGTAATATACCTTTTTTTTCCTT-GTGTCTATTTCTTCTTAGGAA  229

seq1  ATTGGAGGGTATAGAGGTCTGAAT-AAAACTTCACGACTCTATTT-CCAT  298
      || |||||||||||||   ||||| |||||||||||||||||||| ||||
seq2  ATCGGAGGGTATAGAGTCTTGAATAAAAACTTCACGACTCTATTTCCCAT  279

seq1  GTGTCTTTTGAGAATTCTATGCAACCTAAAATACCAAACGTGTTTTATTT  348
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GTGTCTTTTGAGAATTCTATGCAACCT-AAATACCAAACGTGTTTTATTT  328

seq1  CCATGAAACAATGGAGTGGCCAGAAAATGCAAGAATATTAATCTTAAGAA  398
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCATGAAACAATGGAGTGCCCAGAAAATGCAAGAATATTAATCTTAAGAA  378

seq1  TTGACATCAACAACTCAACAGCTTAGCTTCCAAGGCTGAATCTCAAAAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATCAACAACTCAACAGCTTAGCTTCCAAGGCTGAATCTCAAAAAG  428

seq1  TAGATCCATGGGTCTGGACACGGGAGGGGCAAGGAGTTTTCTTTTTTTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCCATGGGTCTGGACACGGGAGGGGCAAGGAGTTTTCTTTTTTTTT  478

seq1  TTTTTTTTTTAAGATCCTCAAAGCACAGAAATCAAAAGTGAAAATAAGCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTAAGATCCTCAAAGCACAGAAATCAAAAGTGAAAATAAGCA  528

seq1  AATGGGTTTTTATCAAACTGCAAAGACTTTTGCACAGCAAAGGAAGTGAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTTTTTATCAAACTGCAAAGACTTTTGCACAGCAAAGGAAGTGAC  578

seq1  AGGAGTTGTGACATCCTGCAGGGAAAAGGTTTGCAAACTCTGTGTCTGCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTGTGACATCCTGCAGGGAAAAGGTTTGCAAACTCTGTGTCTGCC  628

seq1  GTGTGGCCAAGGAAACTTAGAAGGATCTCAAGGAATTCAGTAGCAAAGCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGCCAAGGAAACTTAGAAGGATCTCAAGGAATTCAGTAGCAAAGCA  678

seq1  AGTTCAAGGAGAATAGGCAATCGGTTCAGATAGACTTCCCCACAAAAGGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAGGAGAATAGGCAATCGGTTCAGATAGACTTCCCCACAAAAGGA  728

seq1  TACAAATGGAGCATGTGGAAAGTTTCTGAATGTCAGTAATGACCAGGAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATGGAGCATGTGGAAAGTTTCTGAATGTCAGTAATGACCAGGAAA  778

seq1  ATGCAATATAAACGCCTCATCCTGTAAGAATGAGCAGTGTGACAATGACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATATAAACGCCTCATCCTGTAAGAATGAGCAGTGTGACAATGACA  828

seq1  GACTCAGAAGCTCCCGAGAGGCTGTGGAGAAAAGAGGATTCTTGGATGTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGAAGCTCCCGAGAGGCTGTGGAGAAAAGAGGATTCTTGGATGTT  878

seq1  GTCGGTAGGAACATGGATTAGAACAACTGTTGTGGAAGCAGTACGAGCTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGGTAGGAACATGGATTAGAACAACTGTTGTGGAAGCAGTACGAGCTA  928

seq1  CCTCAGCACGTTAAAATAGAAGTATTACAGGGCTCAGTAGCCCTGCATTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCACGTTAAAATAGAAGTATTACAGGGCTCAGTAGCCCTGCATTG  978

seq1  GATCCTGGTGTGGTCTGGACATTGCAGCGATGGGGATGGGGTGGTGGTGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTGGTGTGGTCTGGACATTGCAGCGATGGGGATGGGGTGGTGGTGA  1028

seq1  TGTGCTTCAAATGCGTTGGGGACTCTCAACATTGCAAGTCTTCCATCTCC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTCAAATGCGTTGGGGACTCTCAACATTGCAAGTCTTCCATCTCC  1078

seq1  TGCTCTAGGGCAAAGTATAAAGCATGAGTGTTTTACTTCTGTCTTTTGCT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTAGGGCAAAGTATAAAGCATGAGTGTTTTACTTCTGTCTTTTGCT  1128

seq1  AGCCCCATGCGGATCAGGTCTTAGTTTTCCTAGGAGGAATTC  1190
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCATGCGGATCAGGTCTTAGTTTTCCTAGGAGGAATTC  1170

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BAC

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Alignment Information