BAC Information

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BAC

Clone NameB6Ng01-163C15
Chromosome12 (Build37)
Map Location 90,136,876 - 90,281,784
singlet/doubletdoublet
Overlap geneNrxn3
Upstream geneLOC100039076, LOC100039087, LOC100039100, LOC100039191, LOC100039203, LOC627873, LOC100039162, LOC627881, LOC100039129, LOC636517, LOC544884, LOC100039226, LOC432715, EG667350, LOC546543, EG667388, LOC627971, LOC667395, LOC100039315, EG638008, EG666862, EG435337, LOC100039154, LOC633093, LOC667440, LOC100039383, EG266459, LOC667475, LOC620915, LOC435314, Adck1, LOC100039261, EG666915
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163C15.bB6Ng01-163C15.g
ACCDH955819DH955820
length1,1141,163
definitionDH955819|Mus musculus domesticus DNA, BAC clone: B6Ng01-163C15, 5' end.DH955820|Mus musculus domesticus DNA, BAC clone: B6Ng01-163C15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,280,677 - 90,281,784)(90,136,876 - 90,138,034)
sequence
gaattctcatctgaggaatagcgaatggctgagaaacacctgaaaaaatg
ttcagcacccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcagaaattcagatgctggt
gaggatatggagaaagaggaacactcctacattgttggtgggattacaag
cttgtacaaccactctggaaatcagtcgggtggttcctcagaaaattgga
catagtactaccagaggatccagcaatacctctcctgggcatatatccag
aagatgttccaactggtaagaaagatacatgctccactatgttcatagca
gccttatttataatagccagaagctggaaagaatccaggtgtccttcaac
agaggaatggatacagaaaatgtggtacatttacacaatggagtacccct
ccaatagtaattcttaaaatattctcagcaaaaaccttgacagtccagta
ggaacaaatctcaaatccagagattatggactaagataacttgtcactga
atgtttcaaaccctttaccttggataacagagagggaagtggaaattgtc
tttttaaaatctgttctgtgtgataggcctataatttacatcatatataa
tgtctcatttcaactctaactatagaatgaccttgatatgtgatcaatat
ttatcctcatgagaaacagaggctaagagaggcagactacttgaacagaa
tcagtgctagccagtctatccaggacaggagttaagtctacacatctcta
gttctaagtgccaattcctacactgctggtagggctctcccaataggact
taagaaagaaatagtaagcaggaaaacttttagacactgttccaagtgta
aagtgcagagacatcacttggtggttgtgatttctttcttttgtgatgca
gtgatgatgtgtttggtttggaaatgtgggagttggtctcccagtcagta
caaaactgtatcttagcacaatttaatctttcatttgacaacaaagagtc
attaagtacaaggtaatatcaaaagaaacaagaatgtttcattgcaatat
ttttatttgcatat
gaattccactgaaggttgagaacatgcctttaaactctccagaaatccct
tgggtaggaatgcttggctttagatgcatgttagagtcctccaggggtct
cagagaattgcctacacctgacctcatcaaagatcccagaatgggcaagt
ctaggttggttaattattatggttttctcagataatcctactccttggcc
aggggtgggaaccatatcgtctcctggttctagtttcatcactcattact
caatacttcttactcctatatacttctagtcttgtcaccaggaaaagaag
tactagttagaaacacagacaccactgactcagtctacccataggcccct
ctttattgttttcagggattttatgaggattattccctgccacagtacac
atcagagcctctcaatcagtgtgtgtagacaagtgtatctgtgtttactt
ctagcaagctgcattaaggattcttttacaggacaaagagaaggagatgc
tgcatttattcaaattccttagggcatatctacctactcatagctcatta
atgcattccaaccagcaccctcccttctccctacattcaagagacattca
cagacatcagctgatacggccattgagagtagagcaagatgctgctgcta
tgtgcttgctttgagtagaggtcttttggggcacttcaaacaccagttct
tttagtgtggactgagccaagcttcttcttttgtgatagctaatattcag
tggatggtggttcaaagacaagacactgcttgtcacccagtccatgaacc
tgctgtgccagtagtttcctctaaggtttgtcttagtgttgctctcaact
atcttttatgactgtgggttaactgagtctaagaacaataaatagaaaat
tccagaataatactttaaatgacttactcttaatatgtatgttgttcagt
tctagtgttagttatcatgtccattcttctactgtgccaaaatgataaat
tctatatgcatatccattatttgctatacctgtaatgatggagggaaatt
aattgtatctttaggcatctcctgcatgtggggagtattaccaagaattg
ctagcacatactggctgggattggccctctggtatacataggggcagtgt
ggctctacattaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_90280677_90281784
seq2: B6Ng01-163C15.b_43_1156 (reverse)

seq1  ATATGCAAATACATA---TGC-ATGAAACTATC-TGTTTC-TCTGATA-T  43
      ||||||||||| | |   ||| |||||||  || |||||| | ||||| |
seq2  ATATGCAAATAAAAATATTGCAATGAAACATTCTTGTTTCTTTTGATATT  50

seq1  ACCTTGTACTTAATGACTCTTTGTTGTCAAATGATAAGATTAAATTGTGC  93
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACCTTGTACTTAATGACTCTTTGTTGTCAAATGA-AAGATTAAATTGTGC  99

seq1  TAAGAATACAGTTTTGTACTGACTGGGAGACCAACT-CCACATTTCCAAA  142
      |||| ||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAAG-ATACAGTTTTGTACTGACTGGGAGACCAACTCCCACATTTCCAAA  148

seq1  CCAAACACATCATCACTGCATCACAAAAGATAGAAATCACAACCACCAAG  192
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCAAACACATCATCACTGCATCACAAAAGAAAGAAATCACAACCACCAAG  198

seq1  TGATGTCTCTGCACTTTACACTTGGAACAGTGTCTAAAAGTTTTCCTGCT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCTCTGCACTTTACACTTGGAACAGTGTCTAAAAGTTTTCCTGCT  248

seq1  TACTATTTCTTTCTTAAGTCCTATTGGGAGAGCCCTACCAGCAGTGTAGG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTTCTTTCTTAAGTCCTATTGGGAGAGCCCTACCAGCAGTGTAGG  298

seq1  AATTGGCACTTAGAACTAGAGATGTGTAGACTTAACTCCTGTCCTGGATA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGCACTTAGAACTAGAGATGTGTAGACTTAACTCCTGTCCTGGATA  348

seq1  GACTGGCTAGCACTGATTCTGTTCAAGTAGTCTGCCTCTCTTAGCCTCTG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGCTAGCACTGATTCTGTTCAAGTAGTCTGCCTCTCTTAGCCTCTG  398

seq1  TTTCTCATGAGGATAAATATTGATCACATATCAAGGTCATTCTATAGTTA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATGAGGATAAATATTGATCACATATCAAGGTCATTCTATAGTTA  448

seq1  GAGTTGAAATGAGACATTATATATGATGTAAATTATAGGCCTATCACACA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGAAATGAGACATTATATATGATGTAAATTATAGGCCTATCACACA  498

seq1  GAACAGATTTTAAAAAGACAATTTCCACTTCCCTCTCTGTTATCCAAGGT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGATTTTAAAAAGACAATTTCCACTTCCCTCTCTGTTATCCAAGGT  548

seq1  AAAGGGTTTGAAACATTCAGTGACAAGTTATCTTAGTCCATAATCTCTGG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTTTGAAACATTCAGTGACAAGTTATCTTAGTCCATAATCTCTGG  598

seq1  ATTTGAGATTTGTTCCTACTGGACTGTCAAGGTTTTTGCTGAGAATATTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGATTTGTTCCTACTGGACTGTCAAGGTTTTTGCTGAGAATATTT  648

seq1  TAAGAATTACTATTGGAGGGGTACTCCATTGTGTAAATGTACCACATTTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATTACTATTGGAGGGGTACTCCATTGTGTAAATGTACCACATTTT  698

seq1  CTGTATCCATTCCTCTGTTGAAGGACACCTGGATTCTTTCCAGCTTCTGG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATCCATTCCTCTGTTGAAGGACACCTGGATTCTTTCCAGCTTCTGG  748

seq1  CTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTATCTTTCTTA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTATCTTTCTTA  798

seq1  CCAGTTGGAACATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGGAACATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATC  848

seq1  CTCTGGTAGTACTATGTCCAATTTTCTGAGGAACCACCCGACTGATTTCC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTAGTACTATGTCCAATTTTCTGAGGAACCACCCGACTGATTTCC  898

seq1  AGAGTGGTTGTACAAGCTTGTAATCCCACCAACAATGTAGGAGTGTTCCT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGTTGTACAAGCTTGTAATCCCACCAACAATGTAGGAGTGTTCCT  948

seq1  CTTTCTCCATATCCTCACCAGCATCTGAATTTCTGATCTTAGCCATTCTG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCCATATCCTCACCAGCATCTGAATTTCTGATCTTAGCCATTCTG  998

seq1  ACTGGTGTGAGATGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGAT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTGTGAGATGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGAT  1048

seq1  GATTAAGGGTGCTGAACATTTTTTCAGGTGTTTCTCAGCCATTCGCTATT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAGGGTGCTGAACATTTTTTCAGGTGTTTCTCAGCCATTCGCTATT  1098

seq1  CCTCAGATGAGAATTC  1108
      ||||||||||||||||
seq2  CCTCAGATGAGAATTC  1114

seq1: chr12_90136876_90138034
seq2: B6Ng01-163C15.g_67_1229

seq1  GAATTCCACTGAAGGTTGAGAACATGCCTTTAAACTCTCCAGAAATCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTGAAGGTTGAGAACATGCCTTTAAACTCTCCAGAAATCCCT  50

seq1  TGGGTAGGAATGCTTGGCTTTAGATGCATGTTAGAGTCCTCCAGGGGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAGGAATGCTTGGCTTTAGATGCATGTTAGAGTCCTCCAGGGGTCT  100

seq1  CAGAGAATTGCCTACACCTGACCTCATCAAAGATCCCAGAATGGGCAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAATTGCCTACACCTGACCTCATCAAAGATCCCAGAATGGGCAAGT  150

seq1  CTAGGTTGGTTAATTATTATGGTTTTCTCAGATAATCCTACTCCTTGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTTGGTTAATTATTATGGTTTTCTCAGATAATCCTACTCCTTGGCC  200

seq1  AGGGGTGGGAACCATATCGTCTCCTGGTTCTAGTTTCATCACTCATTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGGGAACCATATCGTCTCCTGGTTCTAGTTTCATCACTCATTACT  250

seq1  CAATACTTCTTACTCCTATATACTTCTAGTCTTGTCACCAGGAAAAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACTTCTTACTCCTATATACTTCTAGTCTTGTCACCAGGAAAAGAAG  300

seq1  TACTAGTTAGAAACACAGACACCACTGACTCAGTCTACCCATAGGCCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGTTAGAAACACAGACACCACTGACTCAGTCTACCCATAGGCCCCT  350

seq1  CTTTATTGTTTTCAGGGATTTTATGAGGATTATTCCCTGCCACAGTACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTGTTTTCAGGGATTTTATGAGGATTATTCCCTGCCACAGTACAC  400

seq1  ATCAGAGCCTCTCAATCAGTGTGTGTAGACAAGTGTATCTGTGTTTACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGCCTCTCAATCAGTGTGTGTAGACAAGTGTATCTGTGTTTACTT  450

seq1  CTAGCAAGCTGCATTAAGGATTCTTTTACAGGACAAAGAGAAGGAGATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAAGCTGCATTAAGGATTCTTTTACAGGACAAAGAGAAGGAGATGC  500

seq1  TGCATTTATTCAAATTCCTTAGGGCATATCTACCTACTCATAGCTCATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTATTCAAATTCCTTAGGGCATATCTACCTACTCATAGCTCATTA  550

seq1  ATGCATTCCAACCAGCACCCTCCCTTCTCCCTACATTCAAGAGACATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTCCAACCAGCACCCTCCCTTCTCCCTACATTCAAGAGACATTCA  600

seq1  CAGACATCAGCTGATACGGCCATTGAGAGTAGAGCAAGATGCTGCTGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATCAGCTGATACGGCCATTGAGAGTAGAGCAAGATGCTGCTGCTA  650

seq1  TGTGCTTGCTTTGAGTAGAGGTCTTTTGGGGCACTTCAAACACCAGTTC-  699
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGTGCTTGCTTTGAGTAGAGGTCTTTTGGGGCACTTCAAACACCAGTTCT  700

seq1  TTTAGTGTGGACTGAGCCAAGCTTCTTCTTTTGTGATAGCTAATATTCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGTGGACTGAGCCAAGCTTCTTCTTTTGTGATAGCTAATATTCAG  750

seq1  TGGATGGTGGTTCAAAGACAAGACACTGCTTGTCACCCAGTCCATGAACC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGGTGGTTCAAAGACAAGACACTGCTTGTCACCCAGTCCATGAACC  800

seq1  TGCTGTGCCAGTAGTTTCCTCTAAGGTTTGTCTTAGTG-TGCTCTCAACT  848
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGCTGTGCCAGTAGTTTCCTCTAAGGTTTGTCTTAGTGTTGCTCTCAACT  850

seq1  ATCCTTTATGACTGT-GGTTAACTGAGGTCTAAGAACAATAAATAGAAAA  897
      ||| ||||||||||| |||||||||| |||||||||||||||||||||||
seq2  ATCTTTTATGACTGTGGGTTAACTGA-GTCTAAGAACAATAAATAGAAAA  899

seq1  TTCCAGAAATAATACTTTAAATGACTTACTC-TAATATGTTATTGTTGTT  946
      |||||| |||||||||||||||||||||||| ||||||||   |||||||
seq2  TTCCAG-AATAATACTTTAAATGACTTACTCTTAATATGT--ATGTTGTT  946

seq1  CAGTTCTAGTGTTAGTTATCATGT-CAATCTCTTACTGTGCCAAAATGAT  995
      |||||||||||||||||||||||| || |||  |||||||||||||||||
seq2  CAGTTCTAGTGTTAGTTATCATGTCCATTCTTCTACTGTGCCAAAATGAT  996

seq1  AAATTCTAATATGCATATTCAAT-TATGC-ATACCTGTAATGATGGAAGG  1043
      ||||||| |||||||||| || | | ||| ||||||||||||||||| ||
seq2  AAATTCT-ATATGCATATCCATTATTTGCTATACCTGTAATGATGGAGGG  1045

seq1  AAATTTAAATTGTATCTTTAGGCAATCT-CAGCATTGTGTGAGTATCA-C  1091
      |||||  |||||||||||||||| |||| | ||||   | |||||| | |
seq2  AAATT--AATTGTATCTTTAGGC-ATCTCCTGCATGTGGGGAGTATTACC  1092

seq1  AAGATTTGCTAGCACATACCTGCATGGGA-TGGCCTCCTGGTATACATAA  1140
      |||| ||||||||||||| |||  ||||| |||||  |||||||||||| 
seq2  AAGAATTGCTAGCACATA-CTGGCTGGGATTGGCCCTCTGGTATACATAG  1141

seq1  GGGCA-TGTG---CTACAATTAA  1159
      ||||| ||||   |||| |||||
seq2  GGGCAGTGTGGCTCTAC-ATTAA  1163