BAC Information

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BAC

Clone NameB6Ng01-163D17
Chromosome12 (Build37)
Map Location 5,134,698 - 5,135,886
singlet/doubletsinglet
Overlap geneKlhl29
Upstream geneAdcy3, Cenpo, 2410017P09Rik, Ncoa1, LOC100041995, LOC100042005, LOC100042014, Itsn2, 4930417G10Rik, A830093I24Rik, Pfn4, EG626534, 0610009D07Rik, Fkbp1b, BC068281, Gm1964, Ubxd4, Atad2b, LOC668332
Downstream gene2810032G03Rik, LOC435292, LOC100042095, LOC672098, LOC100043137
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163D17.bB6Ng01-163D17.g
ACCDH955871DH955872
length1,1851,183
definitionDH955871|Mus musculus domesticus DNA, BAC clone: B6Ng01-163D17, 5' end.DH955872|Mus musculus domesticus DNA, BAC clone: B6Ng01-163D17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgttgttttgtttttaaataagaaatagacttggctgtcctagg
actcataacgatcctcttgcctatgtctcccaagttctggggctaaaaga
atgtgccaccacgcctggctataataatagtctttaaatccatctaattg
tcaaacaaaaagggcagccctcgccacagcacagtcgccatgcacttacc
actattttacctctgtaaagtcaggatcaacttaacctttccactgagat
cctagatttatttctctttacatcgttggctagttgtgtctcaggacagc
ctgctcccaccatccctaccctgtcccagctgtgctctctgaaaagatgc
tcatccctctcttcgagtcagaatcctcttcagggagataagccatccag
aatttgcaaaccactccccatgacccatcttttaacaaaagtacttcatg
tcacaagcaggggcaatgaagttaaaggcaccaccaaagtgtgacatcat
tcccagaaatgcactagaaaattcccagggaaaccacccccgctgcctgg
gtggcctgggcggcctgggcggcctgcgcgatcacctcccccgctgctgg
gtcctccatcttgagaagcttctgtcttccaacagatggaagcgcacaga
gacaaacccagggcctgtgacatgcaccccatagaaatgtatgctctcaa
aggcaggtccatactttcatacaaggccacatcttctatggtgccacatg
agatgatcagtaaagacccctgaacatatcactaggggacactcatccta
aaaagaaaggaaaagatgacctggcaaaccctaactcacctttatcaagt
ctcatgggtcgtgtcctctttggaaatgcctgcttgatgaacgtggtctc
ctaggaatattgagtgaatggtcagccatactcatccattgttgccgaga
gtatcttaaggagccagtctcagggcccaagatgccttgctatctatcaa
atctgttgcccagaaccttagaaaccaccaggatttgggcgttcaccttg
gtggttaatctgaaagcttctgatcctccctagccatttgacaggcagga
tcagaaggttattttaatccgaacaattcgtatttttgccttcttatatt
catgtgtgtgaaaagagagaaagaggaaaagggag
gaattctcacctgaggaatatcgaatggcagagaggcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggta
ggattgcaagtttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaacagaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccagtaggaaggacacatgctccactat
attcatagcacccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatgtacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaaactcaa
gaagaatgaagactgaagtgtggacactttgcccctccttagaactggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagacg
aaaggatggaccatctagagactgccatatccagggatccaccccataat
cagcttccaaacgctgacacctttgcatacactagcaagatttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacatggctccca
atggaggagctagagaaagtacccaaggagctaaagggatcttgcacctt
ataagtgaacacattatgaactaccagtacccgggagctctgactctagc
tgcatatgtatcaaagatggcttagttgcattcactggaaggatgaggcc
atgtacacgctaactgtatatgcctagtacaggggtactgctaggccata
aaaattgcatgggcggtgtagggaagtgtgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_5134698_5135886
seq2: B6Ng01-163D17.b_48_1232 (reverse)

seq1  CTCCCTTTCTCTCTCTCTCTC-TCTCTCACACATGAATATAAAGAAAGAC  49
      ||||||||  |||| |||||| | || |||||||||||||||   ||| |
seq2  CTCCCTTTTCCTCTTTCTCTCTTTTCACACACATGAATATAA--GAAGGC  48

seq1  AAAAATACAGGAATTGTTTCTGGATTTAAAATAA-CTTCTAGATCCTGCC  98
      ||||||||  ||||||||   ||| ||||||||| ||||| |||||||||
seq2  AAAAATAC--GAATTGTT--CGGA-TTAAAATAACCTTCT-GATCCTGCC  92

seq1  TGTTCAAATGGCTAGGGA-GATCAGAAGCTTTCAGAATTACCA-CAAGGT  146
      || ||||||||||||||| ||||||||||||||||| | |||| ||||||
seq2  TG-TCAAATGGCTAGGGAGGATCAGAAGCTTTCAGATTAACCACCAAGGT  141

seq1  G-ACGCCCAAAT-CTGGTGGTTTCTAAGGTTCTGGGGCACAGATTTGAAT  194
      | |||||||||| |||||||||||||||||||||||  ||||||||| ||
seq2  GAACGCCCAAATCCTGGTGGTTTCTAAGGTTCTGGGCAACAGATTTG-AT  190

seq1  AGATAGCAAGGCATCTTGGGCCCCTGAGACTGGCTCCTTAAGATACTCTC  244
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGATAGCAAGGCATCTTGGG-CCCTGAGACTGGCTCCTTAAGATACTCTC  239

seq1  GGCAACAATGGATGAGTATGGCTGACCATTCACTCAATATTCCTAGGAGA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACAATGGATGAGTATGGCTGACCATTCACTCAATATTCCTAGGAGA  289

seq1  CCACGTTCATCAAGCAGGCATTTCCAAAGAGGACACGACCCATGAGACTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGTTCATCAAGCAGGCATTTCCAAAGAGGACACGACCCATGAGACTT  339

seq1  GAT-AAGGTGAGTTAGGGTTTGCCAGGTCATCTTTTCCTTTCTTTTTAGG  393
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAGGTGAGTTAGGGTTTGCCAGGTCATCTTTTCCTTTCTTTTTAGG  389

seq1  ATGAGTGTCCCCTAGTGATATGTTCAGGGGTCTTTACTGATCATCTCATG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTGTCCCCTAGTGATATGTTCAGGGGTCTTTACTGATCATCTCATG  439

seq1  TGGCACCATAGAAGATGTGGCCTTGTATGAAAGTATGGACCTGCCTTTGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACCATAGAAGATGTGGCCTTGTATGAAAGTATGGACCTGCCTTTGA  489

seq1  GAGCATACATTTCTATGGGGTGCATGTCACAGGCCCTGGGTTTGTCTCTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATACATTTCTATGGGGTGCATGTCACAGGCCCTGGGTTTGTCTCTG  539

seq1  TGCGCTTCCATCTGTTGGAAGACAGAAGCTTCTCAAGATGGAGGACCCAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCTTCCATCTGTTGGAAGACAGAAGCTTCTCAAGATGGAGGACCCAG  589

seq1  CAGCGGGGGAGGTGATCGCGCAGGCCGCCCAGGCCGCCCAGGCCACCCAG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGGGGGAGGTGATCGCGCAGGCCGCCCAGGCCGCCCAGGCCACCCAG  639

seq1  GCAGCGGGGGTGGTTTCCCTGGGAATTTTCTAGTGCATTTCTGGGAATGA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCGGGGGTGGTTTCCCTGGGAATTTTCTAGTGCATTTCTGGGAATGA  689

seq1  TGTCACACTTTGGTGGTGCCTTTAACTTCATTGCCCCTGCTTGTGACATG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACACTTTGGTGGTGCCTTTAACTTCATTGCCCCTGCTTGTGACATG  739

seq1  AAGTACTTTTGTTAAAAGATGGGTCATGGGGAGTGGTTTGCAAATTCTGG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTTTTGTTAAAAGATGGGTCATGGGGAGTGGTTTGCAAATTCTGG  789

seq1  ATGGCTTATCTCCCTGAAGAGGATTCTGACTCGAAGAGAGGGATGAGCAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTATCTCCCTGAAGAGGATTCTGACTCGAAGAGAGGGATGAGCAT  839

seq1  CTTTTCAGAGAGCACAGCTGGGACAGGGTAGGGATGGTGGGAGCAGGCTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAGAGAGCACAGCTGGGACAGGGTAGGGATGGTGGGAGCAGGCTG  889

seq1  TCCTGAGACACAACTAGCCAACGATGTAAAGAGAAATAAATCTAGGATCT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGACACAACTAGCCAACGATGTAAAGAGAAATAAATCTAGGATCT  939

seq1  CAGTGGAAAGGTTAAGTTGATCCTGACTTTACAGAGGTAAAATAGTGGTA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAAGGTTAAGTTGATCCTGACTTTACAGAGGTAAAATAGTGGTA  989

seq1  AGTGCATGGCGACTGTGCTGTGGCGAGGGCTGCCCTTTTTGTTTGACAAT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATGGCGACTGTGCTGTGGCGAGGGCTGCCCTTTTTGTTTGACAAT  1039

seq1  TAGATGGATTTAAAGACTATTATTATAGCCAGGCGTGGTGGCACATTCTT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGGATTTAAAGACTATTATTATAGCCAGGCGTGGTGGCACATTCTT  1089

seq1  TTAGCCCCAGAACTTGGGAGACATAGGCAAGAGGATCGTTATGAGTCCTA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCCCAGAACTTGGGAGACATAGGCAAGAGGATCGTTATGAGTCCTA  1139

seq1  GGACAGCCAAGTCTATTTCTTATTTAAAAACAAAACAACAGAATTC  1189
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCCAAGTCTATTTCTTATTTAAAAACAAAACAACAGAATTC  1185