BAC Information

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BAC

Clone NameB6Ng01-163F24
Chromosome12 (Build37)
Map Location 97,535,911 - 97,716,801
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC667688, Flrt2, 1700019M22Rik, LOC100039664
Downstream geneEG628277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163F24.bB6Ng01-163F24.g
ACCDH955979DH955980
length9061,178
definitionDH955979|Mus musculus domesticus DNA, BAC clone: B6Ng01-163F24, 5' end.DH955980|Mus musculus domesticus DNA, BAC clone: B6Ng01-163F24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,716,280 - 97,716,801)(97,535,911 - 97,537,086)
sequence
gaattctatctttagaactatactccactttttaaattaggttatttgtt
ttgttggtgtttaacttcttaattttctttgtaaattttgagtattatac
ctatgtcagatgtgagtttagtgaaggtgttttcccaacctgtaggctgc
cattttgtcccattaatggcagaaaggtctctctgcttcactgaggctaa
tgggcttccagtttggattagactgtttccattccttactactagatacc
atgcatctgtagtggtgtgtgacccagatgtcttctttgcagcacattct
ctgtgtttttccccacccctttgttttattagatattttctttatatttc
caatgttatcccctttccctttcaaatggtttcccttttgaaaaccccta
tcttatcccccgccccctgctcaccaacccacccactcttgcttccctgt
cctggcatttccctacacaagagcagggcctctcctctccattgatggcc
tacaaggccaccctctactacatatgtggctggagccataggtcccttca
tgtgtactctttggttggtggtttagtgcctaggagctctggggctactg
gttggttcatattgttgatcctcctatggggctttaaacccttcagctcc
ttgggtcctgtctctagctcctccactggggatcctgtgctcagtctaat
agctgagtgcatcaacctctgtatttgtcaggtactggcagggcctcctg
ggagacagctatatcagcccctgtcagcatgcacttctttgcatccagaa
tagtggctgggtttggtgactatatatgggatggattcccagggtgagtc
agtctctgaatggtctttccttcagtctgttgtttgtgtatatctgaagc
ctttcc
gaattcctaggtaaggcagtgtcttagtcagggtttctattcctgcacaa
acatcatgaccaaaaagcaagttggggaggaaagggtttatttggcttac
acttccacactgctgttcatcaccaaaggaagtcaggactggaactcaag
caggtcaggaagcaagagctgatgcagaggccatggagggatgttgttta
ctggcttgcctcccctggcttgctcagcctgctttcttatagaaccagga
ctaccagcccagagatggcaccacccacaaggggcctttcccccttgatc
actaattgagaaaatgccttacagttggatctcatggaggcatttcctca
actgaagctcctttatctgtgataactccagctgtgtcaagttgacacaa
aactagccagtacaggcagtctctgaatggcctttccttcagtctctgtt
ttgatttttgtccctgacttttatctacatttcttctttaaaacaattgt
ttaccagaagttcattggattttttttctatttgaataggaaataatgcc
tttacaaatgcactttcttaatggcacttttaatgaatctccacaggatt
cccatcatgagagaaacagaattatagaccataaggaaatatcttttgag
catctacagccatatgatagtgaatgaacttttctgtttctccaaaagtt
ccaacactatggtggtttgaaaatatttcatggggctttgtcactctttg
tctaaaagtatgagatgtagcaatgcttagatatgttttttacataaatt
gagtatcaaccaaaagagattttattaagtatgaacctatccctgattct
gtaaatcttaagatatttacaaactcatttacattattgctacttggttt
ctttaaagatgggtacaatgatgaactactactagcccttttttttttgt
agttgaagaaatactagtaacataaaacaaatttattgttaccaattaaa
taattgtcttcattaaccttgtttcagtcgaagaactgaaccatggaaat
aatcaatatgtggctagaaaggggaataaaaatttatgagcactggtata
tagcctaaatgctttgagtcaagtgacattgtaaattggacaacaataag
aagtgtgatagtagctttctaacacatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_97716280_97716801
seq2: B6Ng01-163F24.b_427_947 (reverse)

seq1  GGAAAGGCTTCAGATATACACAAAACAACAGACTGAAGGAAAGACCATTC  50
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGAAAGGCTTCAGATATACAC-AAACAACAGACTGAAGGAAAGACCATTC  49

seq1  AGAGACTGACTCA-CCTGGGAATCCATCCCATATATAGTCACCAAACCCA  99
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGAGACTGACTCACCCTGGGAATCCATCCCATATATAGTCACCAAACCCA  99

seq1  GCCACTATTCTGGATGCCAAGAAGTGCATGCTGACAGGGGCCTGATATAG  149
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  GCCACTATTCTGGATGCAAAGAAGTGCATGCTGACAGGGG-CTGATATAG  148

seq1  CTGTCTCCCAGGAGGCCCTGCCAGTACCTGACAAATACAGAGGTTGATGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCCCAGGAGGCCCTGCCAGTACCTGACAAATACAGAGGTTGATGC  198

seq1  ACTCAGCTATTAGACTGAGCACAGGATCCCCAGTGGAGGAGCTAGAGACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCTATTAGACTGAGCACAGGATCCCCAGTGGAGGAGCTAGAGACA  248

seq1  GGACCCAAGGAGCTGAAGGGTTTAAAGCCCCATAGGAGGATCAACAATAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCAAGGAGCTGAAGGGTTTAAAGCCCCATAGGAGGATCAACAATAT  298

seq1  GAACCAACCAGTAGCCCCAGAGCTCCTAGGCACTAAACCACCAACCAAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAACCAGTAGCCCCAGAGCTCCTAGGCACTAAACCACCAACCAAAG  348

seq1  AGTACACATGAAGGGACCTATGGCTCCAGCCACATATGTAGTAGAGGGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACATGAAGGGACCTATGGCTCCAGCCACATATGTAGTAGAGGGTG  398

seq1  GCCTTGTAGGCCATCAATGGAGAGGAGAGGCCCTGCTCTTGTGTAGGGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGTAGGCCATCAATGGAGAGGAGAGGCCCTGCTCTTGTGTAGGGAA  448

seq1  ATGCCAGGACAGGGAAGCAAGAGTGGGTGGGTTGGTGAGCAGGGGGCGGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGGACAGGGAAGCAAGAGTGGGTGGGTTGGTGAGCAGGGGGCGGG  498

seq1  GGATAAGATAGGGGTTTTCAAAA  522
      |||||||||||||||||||||||
seq2  GGATAAGATAGGGGTTTTCAAAA  521

seq1: chr12_97535911_97537086
seq2: B6Ng01-163F24.g_66_1243

seq1  GAATTCCTAGGTAAGGCAGTGTCTTAGTCAGGGTTTCTATTCCTGCACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGGTAAGGCAGTGTCTTAGTCAGGGTTTCTATTCCTGCACAA  50

seq1  ACATCATGACCAAAAAGCAAGTTGGGGAGGAAAGGGTTTATTTGGCTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATGACCAAAAAGCAAGTTGGGGAGGAAAGGGTTTATTTGGCTTAC  100

seq1  ACTTCCACACTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCACACTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAG  150

seq1  CAGGTCAGGAAGCAAGAGCTGATGCAGAGGCCATGGAGGGATGTTGTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCAGGAAGCAAGAGCTGATGCAGAGGCCATGGAGGGATGTTGTTTA  200

seq1  CTGGCTTGCCTCCCCTGGCTTGCTCAGCCTGCTTTCTTATAGAACCAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTGCCTCCCCTGGCTTGCTCAGCCTGCTTTCTTATAGAACCAGGA  250

seq1  CTACCAGCCCAGAGATGGCACCACCCACAAGGGGCCTTTCCCCCTTGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAGCCCAGAGATGGCACCACCCACAAGGGGCCTTTCCCCCTTGATC  300

seq1  ACTAATTGAGAAAATGCCTTACAGTTGGATCTCATGGAGGCATTTCCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTGAGAAAATGCCTTACAGTTGGATCTCATGGAGGCATTTCCTCA  350

seq1  ACTGAAGCTCCTTTATCTGTGATAACTCCAGCTGTGTCAAGTTGACACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGCTCCTTTATCTGTGATAACTCCAGCTGTGTCAAGTTGACACAA  400

seq1  AACTAGCCAGTACAGGCAGTCTCTGAATGGCCTTTCCTTCAGTCTCTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGCCAGTACAGGCAGTCTCTGAATGGCCTTTCCTTCAGTCTCTGTT  450

seq1  TTGATTTTTGTCCCTGACTTTTATCTACATTTCTTCTTTAAAACAATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTTGTCCCTGACTTTTATCTACATTTCTTCTTTAAAACAATTGT  500

seq1  TTACCAGAAGTTCATTGGATTTTTTTTCTATTTGAATAGGAAATAATGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAGAAGTTCATTGGATTTTTTTTCTATTTGAATAGGAAATAATGCC  550

seq1  TTTACAAATGCACTTTCTTAATGGCACTTTTAATGAATCTCCACAGGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAATGCACTTTCTTAATGGCACTTTTAATGAATCTCCACAGGATT  600

seq1  CCCATCATGAGAGAAACAGAATTATAGACCATAAGGAAATATCTTTTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCATGAGAGAAACAGAATTATAGACCATAAGGAAATATCTTTTGAG  650

seq1  CATCTACAGCCATATGATAGTGAATGAACTTTTCTGTTTCTCCAAAAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTACAGCCATATGATAGTGAATGAACTTTTCTGTTTCTCCAAAAGTT  700

seq1  CCAACACTATGGTGGTTTGAAAATATTTCATGGGGCTTTGTCACTCTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACTATGGTGGTTTGAAAATATTTCATGGGGCTTTGTCACTCTTTG  750

seq1  TCTAAAAGTATGAGATGTAGCAATGCTTAGATATGTTTTTTACATAAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAGTATGAGATGTAGCAATGCTTAGATATGTTTTTTACATAAATT  800

seq1  GAGTATCAACCAAAAGAGATTTTATGAAGTATGAACCTATCCCTGATTCT  850
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAGTATCAACCAAAAGAGATTTTATTAAGTATGAACCTATCCCTGATTCT  850

seq1  GTAAATCTTAAGATATTTACAAACTCATTTACATTATTGCTACTTGGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATCTTAAGATATTTACAAACTCATTTACATTATTGCTACTTGGTTT  900

seq1  CTTTAAGGATGGGTACAATGATG-ACTTCTACTAGCCC-TTTTTTTTTGT  948
      |||||| |||||||||||||||| ||| |||||||||| |||||||||||
seq2  CTTTAAAGATGGGTACAATGATGAACTACTACTAGCCCTTTTTTTTTTGT  950

seq1  AGTTGAAGAAATACTAGTAACAT-AAACAAATTTATTG-TACCAATTAAA  996
      ||||||||||||||||||||||| |||||||||||||| |||||||||||
seq2  AGTTGAAGAAATACTAGTAACATAAAACAAATTTATTGTTACCAATTAAA  1000

seq1  TAATTGTCTTCATTAACCTTG-TTCAGTCGA--GACTGAAACCATGGAAA  1043
      ||||||||||||||||||||| |||||||||   |||| |||||||||||
seq2  TAATTGTCTTCATTAACCTTGTTTCAGTCGAAGAACTG-AACCATGGAAA  1049

seq1  TTATCAATATGT-GCTAGAAAGGTGATTATAAATTTATGAGCACTTGTAT  1092
      | |||||||||| |||||||||| || || ||||||||||||||| ||| 
seq2  TAATCAATATGTGGCTAGAAAGGGGAATAAAAATTTATGAGCACTGGTA-  1098

seq1  TATAGCATAAATCCTTCTGAGCTCAGTTGACA-TGTAATTGTGACAACAA  1141
      |||||| ||||| ||| |||| |||  ||||| ||||| |  ||||||||
seq2  TATAGCCTAAATGCTT-TGAG-TCAAGTGACATTGTAAATTGGACAACAA  1146

seq1  TAATGAAAGTTTGAAGATGAGCTTTCTAACACATT  1176
      |||   |||| || | |  ||||||||||||||||
seq2  TAA--GAAGTGTG-ATAGTAGCTTTCTAACACATT  1178