BAC Information

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BAC

Clone NameB6Ng01-164M03
Chromosome12 (Build37)
Map Location 94,039,488 - 94,132,406
singlet/doubletdoublet
Overlap genenone
Upstream geneSel1l, LOC100039367, EG432681, LOC667589, LOC100039387, LOC100039425, LOC628116
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164M03.bB6Ng01-164M03.g
ACCDH956997DH956998
length1,149968
definitionDH956997|Mus musculus domesticus DNA, BAC clone: B6Ng01-164M03, 5' end.DH956998|Mus musculus domesticus DNA, BAC clone: B6Ng01-164M03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,131,239 - 94,132,406)(94,039,488 - 94,040,474)
sequence
gaattctgtggcgaaaacatgtcatgagaactctatatggcaagaccctt
tctttcaattttctcagcttgttgaattttgcaaccatagtatcaatctt
ttcaacactaatttctcttctagttcctttctaccctagcacctctacat
caccgtaatcttgacaaaattttatttgcaatttgcaaagctttgaatat
aacccaggttttatatagtccctctagtcattctgtcacagggcaatttg
aatcattaaagttctaggaataaggccaaaagaagattactaagaggcag
accccaacagtattggagtttgcttctggaaaagtatgcagttttcattt
gatttggtgcaaagaactatttgaaaacactttaaattatatctctctct
ctctctctagtggcagtttcttataaatgtgttatgaattaaaaaatcag
gtatggatatcacgggaaatttttcctctctatctgtgattaattcttac
taaagtcatcacaatgcagtctcatgagagacatttgatgtccaaatgcc
tttttaagagacatttcggtctttactcttcaatcaagatcctcttttta
aaatctcaaaataagtagactcaatctgtaaaacaccttgaaattactct
gagattccaagccttgtgaaatcaaagaaatctcaagtatgctcatccta
tcaataattttgatcattctctgaaatataactcggggccctcaagatta
taaaattggtccatttatcttgaggctaagaaattaatgaggtgatactt
cgccaagcaatttcaattcagaggcagagcctgacggtgtgattcataat
tgccattattgctgcttgttgcatttacctttctaggaacgatgaatctc
gttttaatttactatagttgcatttaacagtattgcagtgctgaatcact
gggacagatattgccatatcatccacatatcattgaagccttgctatttt
attgatcaaagcatggtataactctaatgcttttaacattttcatgtgga
ttactccatactagttttattggtgcagttattgagacattggcagtcac
aaattaaattcttacagccaatttctttcattgatgcaaccatgcttgg
gaattctttgaacaatgaatggcactggcagagatctatttgaagaaatg
taaggaaatagggcttaggatagttcacaggaatgcttatcatctctgat
acatgcttagcactttgtgggatggcatcattatttctctattgctatga
caaaaccctataaccaaggagacctataaacaaaagcttttaattatggg
attcatgaggaacagtgcaagagcccataccatcatggcaggtaccatgg
cagcagggaagctggcacggctctggagcagatgctaagagcttctgtct
tattctctgatacagggtgctttggggcacactgactgttcaaacacctt
accagttcaagtatatataattcagtggttgtatttttgacattttagat
taatgttttaggtatggcactggaaagatggagaaagaaataaggatgtt
ttaaattttattaatgtagctaaataagaaattcattttacagaggctgg
aagacaaaggagcagtcgaaggatcaaaagcctttgaagaactaggaatt
gataggtttaaatgcatattaaaatttacaataaccaatattaaaagtca
acttggcaggatctagaatgacctgtgagacaagcctctgggcatgactg
caagggattgtctatattaggctacttgagatgggaagaggcaatttaaa
tgtgggcagcacattccatgagctggggtcttgggttaagtaagaaaaat
agggcatgcttcctttctgctatgggcacctggaatcttttggccactat
gactgatcatagcattaaatatataacatatatttatataatgagaatca
attgatgttaaggaacaatttctaataataaatcctttgtgcaatgtatg
catgtatgtgtgtgtgtttccctgtgtatgtctctgtgtgtgtttgtgtg
tgtgttgtgtgtatgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_94131239_94132406
seq2: B6Ng01-164M03.b_46_1194 (reverse)

seq1  CCAAGCATATGGGGTTGCATTCAAAATGAAAGAAAATTTGACTGTAAAGA  50
      ||||||||    ||||||||    |||||||||||  ||| |||| ||||
seq2  CCAAGCAT----GGTTGCAT---CAATGAAAGAAA--TTGGCTGT-AAGA  40

seq1  ATTTAATATTGTGACTGCCAAATTGTCTCAATAACTGCAACCAATAAAAA  100
      ||||||| |||||||||||||  ||||||||||||||| |||||||||| 
seq2  ATTTAAT-TTGTGACTGCCAA--TGTCTCAATAACTGC-ACCAATAAAAC  86

seq1  TTAATTATGGAGTAATTCCACATGAAAATTGTTAAAAGCATTTAGAGTTA  150
      |  | |||||||||| |||||||||||| ||||||||||| |||||||||
seq2  T--AGTATGGAGTAA-TCCACATGAAAA-TGTTAAAAGCA-TTAGAGTTA  131

seq1  TACCATGCTTTGATCAATAAAATAGCAAGGCTTCAATGATATGTGGATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATGCTTTGATCAATAAAATAGCAAGGCTTCAATGATATGTGGATGA  181

seq1  TATGGCAATATCTGTCCCAGTGATTCAGCACTGCAATACTGTTAAATGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCAATATCTGTCCCAGTGATTCAGCACTGCAATACTGTTAAATGCA  231

seq1  ACTATAGTAAATTAAAACGAGATTCATCGTTCCTAGAAAGGTAAATGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAGTAAATTAAAACGAGATTCATCGTTCCTAGAAAGGTAAATGCAA  281

seq1  CAAGCAGCAATAATGGCAATTATGAATCACACCGTCAGGCTCTGCCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGCAATAATGGCAATTATGAATCACACCGTCAGGCTCTGCCTCTG  331

seq1  AATTGAAATTGCTTGGCGAAGTATCACCTCATTAATTTCTTAGCCTCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAATTGCTTGGCGAAGTATCACCTCATTAATTTCTTAGCCTCAAG  381

seq1  ATAAATGGACCAATTTTATAATCTTGAGGGCCCCGAGTTATATTTCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGGACCAATTTTATAATCTTGAGGGCCCCGAGTTATATTTCAGAG  431

seq1  AATGATCAAAATTATTGATAGGATGAGCATACTTGAGATTTCTTTGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCAAAATTATTGATAGGATGAGCATACTTGAGATTTCTTTGATTT  481

seq1  CACAAGGCTTGGAATCTCAGAGTAATTTCAAGGTGTTTTACAGATTGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGGCTTGGAATCTCAGAGTAATTTCAAGGTGTTTTACAGATTGAGT  531

seq1  CTACTTATTTTGAGATTTTAAAAAGAGGATCTTGATTGAAGAGTAAAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTATTTTGAGATTTTAAAAAGAGGATCTTGATTGAAGAGTAAAGAC  581

seq1  CGAAATGTCTCTTAAAAAGGCATTTGGACATCAAATGTCTCTCATGAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAATGTCTCTTAAAAAGGCATTTGGACATCAAATGTCTCTCATGAGAC  631

seq1  TGCATTGTGATGACTTTAGTAAGAATTAATCACAGATAGAGAGGAAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGTGATGACTTTAGTAAGAATTAATCACAGATAGAGAGGAAAAAT  681

seq1  TTCCCGTGATATCCATACCTGATTTTTTAATTCATAACACATTTATAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCGTGATATCCATACCTGATTTTTTAATTCATAACACATTTATAAGA  731

seq1  AACTGCCACTAGAGAGAGAGAGAGAGATATAATTTAAAGTGTTTTCAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCACTAGAGAGAGAGAGAGAGATATAATTTAAAGTGTTTTCAAAT  781

seq1  AGTTCTTTGCACCAAATCAAATGAAAACTGCATACTTTTCCAGAAGCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTGCACCAAATCAAATGAAAACTGCATACTTTTCCAGAAGCAAA  831

seq1  CTCCAATACTGTTGGGGTCTGCCTCTTAGTAATCTTCTTTTGGCCTTATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAATACTGTTGGGGTCTGCCTCTTAGTAATCTTCTTTTGGCCTTATT  881

seq1  CCTAGAACTTTAATGATTCAAATTGCCCTGTGACAGAATGACTAGAGGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAACTTTAATGATTCAAATTGCCCTGTGACAGAATGACTAGAGGGA  931

seq1  CTATATAAAACCTGGGTTATATTCAAAGCTTTGCAAATTGCAAATAAAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATAAAACCTGGGTTATATTCAAAGCTTTGCAAATTGCAAATAAAAT  981

seq1  TTTGTCAAGATTACGGTGATGTAGAGGTGCTAGGGTAGAAAGGAACTAGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCAAGATTACGGTGATGTAGAGGTGCTAGGGTAGAAAGGAACTAGA  1031

seq1  AGAGAAATTAGTGTTGAAAAGATTGATACTATGGTTGCAAAATTCAACAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATTAGTGTTGAAAAGATTGATACTATGGTTGCAAAATTCAACAA  1081

seq1  GCTGAGAAAATTGAAAGAAAGGGTCTTGCCATATAGAGTTCTCATGACAT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAAAATTGAAAGAAAGGGTCTTGCCATATAGAGTTCTCATGACAT  1131

seq1  GTTTTCGCCACAGAATTC  1168
      ||||||||||||||||||
seq2  GTTTTCGCCACAGAATTC  1149

seq1: chr12_94039488_94040474
seq2: B6Ng01-164M03.g_67_1034

seq1  GAATTCTTTGAACAATGAATGGCACTGGCAGAGATCTATTTGAAGAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAACAATGAATGGCACTGGCAGAGATCTATTTGAAGAAATG  50

seq1  TAAGGAAATAGGGCTTAGGATAGTTCACAGGAATGCTTATCATCTCTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAATAGGGCTTAGGATAGTTCACAGGAATGCTTATCATCTCTGAT  100

seq1  ACATGCTTAGCACTTTGTGGGATGGCATCATTATTTCTCTATTGCTATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTTAGCACTTTGTGGGATGGCATCATTATTTCTCTATTGCTATGA  150

seq1  CAAAACCCTATAACCAAGGAGACCTATAAACAAAAGCTTTTAATTATGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCCTATAACCAAGGAGACCTATAAACAAAAGCTTTTAATTATGGG  200

seq1  ATTCATGAGGAACAGTGCAAGAGCCCATACCATCATGGCAGGTACCATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGAGGAACAGTGCAAGAGCCCATACCATCATGGCAGGTACCATGG  250

seq1  CAGCAGGGAAGCTGGCACGGCTCTGGAGCAGATGCTAAGAGCTTCTGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGGAAGCTGGCACGGCTCTGGAGCAGATGCTAAGAGCTTCTGTCT  300

seq1  TATTCTCTGATACAGGGTGCTTTGGGGCACACTGACTGTTCAAACACCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCTGATACAGGGTGCTTTGGGGCACACTGACTGTTCAAACACCTT  350

seq1  ACCAGTTCAAGTATATATAATTCAGTGGTTGTATTTTTGACATTTTAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTTCAAGTATATATAATTCAGTGGTTGTATTTTTGACATTTTAGAT  400

seq1  TAATGTTTTAGGTATGGCACTGGAAAGATGGAGAAAGAAATAAGGATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTTTAGGTATGGCACTGGAAAGATGGAGAAAGAAATAAGGATGTT  450

seq1  TTAAATTTTATTAATGTAGCTAAATAAGAAATTCATTTTACAGAGGCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTTATTAATGTAGCTAAATAAGAAATTCATTTTACAGAGGCTGG  500

seq1  AAGACAAAGGAGCAGTCGAAGGATCAAAAGCCTTTGAAGAACTAGGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAAGGAGCAGTCGAAGGATCAAAAGCCTTTGAAGAACTAGGAATT  550

seq1  GATAGGTTTAAATGCATATTAAAATTTACAATAACCAATATTAAAAGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGTTTAAATGCATATTAAAATTTACAATAACCAATATTAAAAGTCA  600

seq1  ACTTGGCAGGATCTAGAATGACCTGTGAGACAAGCCTCTGGGCATGACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCAGGATCTAGAATGACCTGTGAGACAAGCCTCTGGGCATGACTG  650

seq1  CAAGGGATTGTCTATATTAGGCTACTTGAGATGGGAAGAGGCAATTTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGATTGTCTATATTAGGCTACTTGAGATGGGAAGAGGCAATTTAAA  700

seq1  TGTGGGCAGCACATTCCATGAGCTGGGGTCTTGGGTTAAGTAAGAAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCAGCACATTCCATGAGCTGGGGTCTTGGGTTAAGTAAGAAAAAT  750

seq1  AGGGCATGCTTCCTTTCTGCTATGGGCACCTGGAATCTTTTGGCCACTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATGCTTCCTTTCTGCTATGGGCACCTGGAATCTTTTGGCCACTAT  800

seq1  GACTGATCATAGCATTAAATATATAACATATATTTATATAATGAGAATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGATCATAGCATTAAATATATAACATATATTTATATAATGAGAATCA  850

seq1  ATTGATGTTAAGGAACAATTTCTAATAATAAATCCTTTGTGCAATGTATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATGTTAAGGAACAATTTCTAATAATAAATCCTTTGTGCAATGTATG  900

seq1  CATGTATGTGTGTGTGTTTCCCTGTGTATGTCTCTGTGTGTGTTTGTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATGTGTGTGTGTTTCCCTGTGTATGTCTCTGTGTGTGTTTGTGTG  950

seq1  TGTG-TGTGTGTATGAGACTGTGTGTGTGTGTATGAGA  987
      |||| |||||||||||||                    
seq2  TGTGTTGTGTGTATGAGA--------------------  968