BAC Information

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BAC

Clone NameB6Ng01-166A17
Chromosome12 (Build37)
Map Location 8,118,307 - 8,119,368
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668380, EG668388, Apob
Downstream gene1110057K04Rik, Gdf7, Hs1bp3, BC106175, Rhob, Slc7a15, LOC100043154, Pum2, F730043H23, Sdc1, Laptm4a, Matn3, Wdr35, Ttc32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166A17.bB6Ng01-166A17.g
ACCDH957935DH957936
length1,2151,056
definitionDH957935|Mus musculus domesticus DNA, BAC clone: B6Ng01-166A17, 5' end.DH957936|Mus musculus domesticus DNA, BAC clone: B6Ng01-166A17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttacatgataacccacagttgtgccagcaccttttgttaaaa
atgctgtcttattttccactgaatggttttagctcccttgtcaaagatca
agtgaccataggtgtgtggattcatttctgggtcttcaattctattccat
tgatctacctatctgtcactgtaccagtaccatgcagtttttatcacagt
tgctctgtagtacagcttaatgtcaggcatggtgattgcacgagaggttc
ttttattgttgagaatagtttttgctatcctaggtttgttattattccag
atgaatttgcaaattgccctttctaacacagtgaataattgagttggaat
tttgatgggaattgcattgaatctgtagattgctttaggcaggatagcca
tttttacgatattaatcctgccaatccatgaacatgggagatctttccat
cttttgagatcttcttcaatttctttcttcagagacttgatattcttttt
ttttatgttgcagtatttctttttcttttttttgttcttttttaaattga
atatttatttcatttacatttccaatgctatcccaaaagtcccccacacg
ctcccccacccactcccacttcttggccctgtcgttcccctgtactgagg
cgtataaagtttgcacgactaatgggcatctctttccactgatggccaac
taggccattttctgattcatatgcagctagagacacgagctcagagtggg
tactggctagttcatattgttgttccacctataggattgcagatcccttt
agctccttggctactttctctagctcctccattggaggccctgtgatcca
tccaatagccgactgtgagcatccacttctgtgtttgctaggccccggca
tagtctcagttgatggatttccgtatattgaaccatcctgcatccctggg
atgaaacctacctggtcaggatggatgattgttttgatgttgttcttgga
ttccggtaaggaaaccttattgaggattttgcgtcgatattcataggaaa
ttggtctgagtcctcatcttgttgggtcctttttgggttaaaaatacaaa
gaattgggggctacgaaatagatgggtgagagaccctctcgttccttctt
aggaattttggaactggagtaattctcttaagtctagagaccgtctaacc
actcgggtgcgcgcg
gaattctcatggaaacagaggcaaggacttcctgtgactggaggaagtag
aggctagttccactttgatcaaaggatatcttggctcccctccaggctct
ccaggctttgtcagctgccattcttctgtcccagccacatggcccacaca
gcccacagacgacacttcccagtgacccatgagctatcagctgatctcac
tggcagtggtgctgatggacatctgtccgcctctctgctttgatgtggga
gctcgtaattgtttcctgagtgactggaccagctccatggtgtttccctt
cagtgggatgagcagctatgccactaaataaaaccatctttgaaatcggc
tttcagaaggtactgtctggaaaggaccttgttcatttttctttcgattc
agggtcatggccataattccagctccaatatatccaaaattaattgaggt
gtatattcttctcaaaatatacatgtccagctttgagcttctttcatatg
agcagctaaagccaagacattggagtttgtcctcaattctgtctcattgg
ctcccaaagaatattttacagagacttagaattcccatagccctttcaag
gactatattcacgacaaatacaaccagttgcctttttctatagtggcatt
tgcattgattgtagaatagatattgtgtatttttaattcaaaaatctaga
aaatttatgtctgccactgggagcttgtaagggtgggcagcattattagc
agaagcagctgtgtctcatactgtctagtgaaatgctctgatagacattt
gggagatataatggtccacataactcagtagaccattgctttcaaagagg
ccaatgtattatgtcacaatcccatatgtgagtaaaagcactataaacag
gcattaaagtccaatgagttttcatgtaatagcacaaaataatttactaa
tatggtgccagatcctacattgtaactaattcttagattctggtaagaag
attgccatgctcctgctattatataaagtcactacagaagttggttacta
tagtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_8118307_8119368
seq2: B6Ng01-166A17.g_69_1124

seq1  GAATTCTCATGGAAACAGAGGCAAGGACTTCCTGTGACTGGAGGAAGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGGAAACAGAGGCAAGGACTTCCTGTGACTGGAGGAAGTAG  50

seq1  AGGCTAGTTCCACTTTGATCAAAGGATATCTTGGCTCCCCTCCAGGCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGTTCCACTTTGATCAAAGGATATCTTGGCTCCCCTCCAGGCTCT  100

seq1  CCAGGCTTTGTCAGCTGCCATTCTTCTGTCCCAGCCACATGGCCCACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTTTGTCAGCTGCCATTCTTCTGTCCCAGCCACATGGCCCACACA  150

seq1  GCCCACAGACGACACTTCCCAGTGACCCATGAGCTATCAGCTGATCTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACAGACGACACTTCCCAGTGACCCATGAGCTATCAGCTGATCTCAC  200

seq1  TGGCAGTGGTGCTGATGGACATCTGTCCGCCTCTCTGCTTTGATGTGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTGGTGCTGATGGACATCTGTCCGCCTCTCTGCTTTGATGTGGGA  250

seq1  GCTCGTAATTGTTTCCTGAGTGACTGGACCAGCTCCATGGTGTTTCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGTAATTGTTTCCTGAGTGACTGGACCAGCTCCATGGTGTTTCCCTT  300

seq1  CAGTGGGATGAGCAGCTATGCCACTAAATAAAACCATCTTTGAAATCGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGATGAGCAGCTATGCCACTAAATAAAACCATCTTTGAAATCGGC  350

seq1  TTTCAGAAGGTACTGTCTGGAAAGGACCTTGTTCATTTTTCTTTCGATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAAGGTACTGTCTGGAAAGGACCTTGTTCATTTTTCTTTCGATTC  400

seq1  AGGGTCATGGCCATAATTCCAGCTCCAATATATCCAAAATTAATTGAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCATGGCCATAATTCCAGCTCCAATATATCCAAAATTAATTGAGGT  450

seq1  GTATATTCTTCTCAAAATATACATGTCCAGCTTTGAGCTTCTTTCATATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTCTTCTCAAAATATACATGTCCAGCTTTGAGCTTCTTTCATATG  500

seq1  AGCAGCTAAAGCCAAGACATTGGAGTTTGTCCTCAATTCTGTCTCATTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTAAAGCCAAGACATTGGAGTTTGTCCTCAATTCTGTCTCATTGG  550

seq1  CTCCCAAAGAATATTTTACAGAGACTTAGAATTCCCATAGCCCTTTCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAAGAATATTTTACAGAGACTTAGAATTCCCATAGCCCTTTCAAG  600

seq1  GACTATATTCACGACAAATACAACCAGTTGCCTTTTTCTATAGTGGCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATATTCACGACAAATACAACCAGTTGCCTTTTTCTATAGTGGCATT  650

seq1  TGCATTGATTGTAGAATAGATATTGTGTATTTTTAATTCAAAAATCTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGATTGTAGAATAGATATTGTGTATTTTTAATTCAAAAATCTAGA  700

seq1  AAATTTATGTCTGCCACTGGGAGCTTGTAAGGGTGGGCAGCATTATTAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATGTCTGCCACTGGGAGCTTGTAAGGGTGGGCAGCATTATTAGC  750

seq1  AGAAGCAGCTGTGTCTCATACTGTCTAGTGAAATGCTCTGATAGACATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAGCTGTGTCTCATACTGTCTAGTGAAATGCTCTGATAGACATTT  800

seq1  GGGAGATATAATGGTCCACATAACTCAGTAGACCATTGCTTTCAAAGAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGATATAATGGTCCACATAACTCAGTAGACCATTGCTTTCAAAGAGG  850

seq1  CCAATGTATTATGTCACAATCCCATATGTGAGTAAAAGCACTATAAACAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCAATGTATTATGTCACAATCCCATATGTGAGTAAAAGCACTATAAACA-  899

seq1  GGCATTAAAGTCCAATGAGTTTTCATGTAATAGCACAAAATAATTTACTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTAAAGTCCAATGAGTTTTCATGTAATAGCACAAAATAATTTACTA  949

seq1  ATATGGTGCCAGATCCTACATTGTAACTAATTCTTAGATTCTGGTTAAAG  1000
      |||||||||||||||||||||||||||||||||||||||||||||  |||
seq2  ATATGGTGCCAGATCCTACATTGTAACTAATTCTTAGATTCTGGT--AAG  997

seq1  AAGAATTGCCATGCTCCTGCTATTTATAATTAAAGTCACTACAG-AGTTG  1049
      ||| |||||||||||||||||| |||||  |||||||||||||| |||||
seq2  AAG-ATTGCCATGCTCCTGCTA-TTATA--TAAAGTCACTACAGAAGTTG  1043

seq1  GTTACTATAGTGT  1062
      |||||||||||||
seq2  GTTACTATAGTGT  1056