BAC Information

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BAC

Clone NameB6Ng01-167A17
Chromosome12 (Build37)
Map Location 20,804,207 - 20,805,411
singlet/doubletsinglet
Overlap geneLOC625810
Upstream geneEG668594, EG668600, LOC100042727, LOC673301, EG668605, LOC668614, LOC100042751, LOC100043371, EG668455, LOC100042755, LOC100043377
Downstream gene1700030C10Rik, 3110053B16Rik, LOC668698, LOC546752, EG629257, Ddef2, Itgb1bp1, Cpsf3, Iah1, Adam17, Ywhaq, LOC100043407, LOC100042796, 6030426L16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167A17.bB6Ng01-167A17.g
ACCDH958648DH958649
length1,1931,163
definitionDH958648|Mus musculus domesticus DNA, BAC clone: B6Ng01-167A17, 5' end.DH958649|Mus musculus domesticus DNA, BAC clone: B6Ng01-167A17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaggataacttgtggaatctggttctcttttcctaccatgtgg
gtcttagggattgaacccaggctgccagacttggtagtaagcacctttac
ccacagagtcagctcactggaccaaatacagtgatggtttagagcatgga
gcaggaaggatgcagggtgcacataagcatcgctcctgtgaagaactgac
tgctgactcatcttttaatgtgtcattctgatttctataggaagccctat
agatagctaacgagtgtgcaggtgaacactcacccgtgcagaggccaaac
aggaatacaggtgttcataataatccctttatcctctcactgaacccggc
tggggcttaccattgtagctaggctgcctgctcagcaagcttctgggact
cacttgtcccctagttctagggattcgggcatgctcaggcactcctggct
tttccaagggtgttgggatcagaactcaggtcctcatgttgggtatcaag
tgttcttccccactgacccattttcccagttcttgcttttacaattctta
atcacctatctgagcctcagatctcattagaggttaaaaaaaaagacccg
ttttataaaattgtgtgaataaacctgatggatgagctcagctggggcct
gatgtcctgcaagcaatcaatatatgcttggcttttatcattactctctg
caaagacaggcagtcctttagtacaccaggtagcaagtgggcagaggaat
gacctggtgtatggggtcggggatggctgtcctggatccctgcactcccc
atgcttaaggccctgtcaagtgcaggtacctgcactatctccagcatttc
actgcagctgatgtagccattgcggtctggtcctatatgctgaagaccca
cttcatcttctattccaattgtcccgagaggtcatgctcagagcaatgat
gaacactcagaagtcgatggtgctgtcgctgttggtgtcaaagtgttgaa
gacatgttcagccacttggaggcatctctgtaggggaaaagttgctagaa
attgaaatgtacacagtcagtgcagtgggacagtcattgagaaggccctt
gtaccactctgaagctcatggtgggtgaacttctggtgtttcgcaagtct
tgccagcacctccaggaaccgcttgcgttctgcttggccatgg
gaattctcaccggaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagattaaaaattcaggtgacagc
agatgctggcgaggatgtcgagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaataccatctcttggg
catatatccagaagatgtcccaaccggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaaggtggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatttacaaaat
ggaatactactcagctattaagaggaatgaatttatgaaattcctagcca
aataaatgaacctggagggcatcatcctgagtgaggtaacacattcacca
aggaactcacacaatatgtactcactgataagtggatattagcctaaaac
ttaggatacccaaaatataagatacaatttgctaaacacatgaaactcaa
gaagaatgaagactgaagtatggacactatgcccctccttagaattggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagact
aaaggatggaccatctagagaccgccatatccagggatccaccccataat
cagcttccaaaccctgacaccattgcatacactagcaagattttgctgaa
aggacccagatgtagctgtctcatgtgagactatgccacggcctagcaaa
cacagaagtggatgctcacagtcagttatggatggttcacaggctcccaa
tggaggagctagagaaagtacccaagagctaaaggatttgcaccctatag
tggaacaacattatgaactaccagtacccgagctctgactctagctgcat
tgtatcaaagatggcctagtcggcctcactgaaaagaaggccattgaaac
tcaactgttattgcccagaacaggaacgctcagccaaaatggaatggttg
taggaagtgggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_20804207_20805411
seq2: B6Ng01-167A17.b_49_1241 (reverse)

seq1  CCATGGGCAAGCAGAACAGCAAGCCGGGTCCT-GAGGTGCT-GCAGGACT  48
      |||||| |||||||||| ||||| ||| |||| |||||||| ||| ||||
seq2  CCATGGCCAAGCAGAAC-GCAAG-CGGTTCCTGGAGGTGCTGGCAAGACT  48

seq1  TGCGGAAACACAGGAAGTTCACCAACCATGAGCTTCAGGAGTGGTACAAG  98
      ||| |||||||  |||||||||| ||||||||||||| ||||||||||||
seq2  TGC-GAAACACCAGAAGTTCACCCACCATGAGCTTCA-GAGTGGTACAAG  96

seq1  GGCTTCCTCAATGACTGTCCCACTGGCCACCTGACTGTGTACAATTTCAA  148
      ||| | |||||||||||||||||||  || |||||||||||| |||||||
seq2  GGCCTTCTCAATGACTGTCCCACTG--CA-CTGACTGTGTAC-ATTTCAA  142

seq1  TTTCTAGGCCAACTTTTTCCCCTACAGAGATGCCTCCAAGTTGGCTGAAC  198
      |||||||  |||| |||||||||||||||||||||||||| |||||||||
seq2  TTTCTAG--CAAC-TTTTCCCCTACAGAGATGCCTCCAAG-TGGCTGAAC  188

seq1  ATGTCTTCAACACCTTTGACACCAACAGCGACAGCACCATCGACTTCTGA  248
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTCAACA-CTTTGACACCAACAGCGACAGCACCATCGACTTCTGA  237

seq1  GTGTTCATCATTGCTCTGAGCATGACCTCTCGGGACAATTGGAATAGAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCATCATTGCTCTGAGCATGACCTCTCGGGACAATTGGAATAGAAG  287

seq1  ATGAAGTGGGTCTTCAGCATATAGGACCTAGACCGCAATGGCTACATCAG  348
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATGAAGTGGGTCTTCAGCATATAGGACC-AGACCGCAATGGCTACATCAG  336

seq1  CTGCAGTGAAATGCTGGAGATAGTGCAGGTACCTGCACTTGACAGGGCCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTGAAATGCTGGAGATAGTGCAGGTACCTGCACTTGACAGGGCCT  386

seq1  TAAGCATGGGGAGTGCAGGGATCCAGGACAGCCATCCCCGACCCCATACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATGGGGAGTGCAGGGATCCAGGACAGCCATCCCCGACCCCATACA  436

seq1  CCAGGTCATTCCTCTGCCCACTTGCTACCTGGTGTACTAAAGGACTGCCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTCATTCCTCTGCCCACTTGCTACCTGGTGTACTAAAGGACTGCCT  486

seq1  GTCTTTGCAGAGAGTAATGATAAAAGCCAAGCATATATTGATTGCTTGCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGCAGAGAGTAATGATAAAAGCCAAGCATATATTGATTGCTTGCA  536

seq1  GGACATCAGGCCCCAGCTGAGCTCATCCATCAGGTTTATTCACACAATTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCAGGCCCCAGCTGAGCTCATCCATCAGGTTTATTCACACAATTT  586

seq1  TATAAAACGGGTCTTTTTTTTTAACCTCTAATGAGATCTGAGGCTCAGAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAACGGGTCTTTTTTTTTAACCTCTAATGAGATCTGAGGCTCAGAT  636

seq1  AGGTGATTAAGAATTGTAAAAGCAAGAACTGGGAAAATGGGTCAGTGGGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATTAAGAATTGTAAAAGCAAGAACTGGGAAAATGGGTCAGTGGGG  686

seq1  AAGAACACTTGATACCCAACATGAGGACCTGAGTTCTGATCCCAACACCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACACTTGATACCCAACATGAGGACCTGAGTTCTGATCCCAACACCC  736

seq1  TTGGAAAAGCCAGGAGTGCCTGAGCATGCCCGAATCCCTAGAACTAGGGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAAGCCAGGAGTGCCTGAGCATGCCCGAATCCCTAGAACTAGGGG  786

seq1  ACAAGTGAGTCCCAGAAGCTTGCTGAGCAGGCAGCCTAGCTACAATGGTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGAGTCCCAGAAGCTTGCTGAGCAGGCAGCCTAGCTACAATGGTA  836

seq1  AGCCCCAGCCGGGTTCAGTGAGAGGATAAAGGGATTATTATGAACACCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCAGCCGGGTTCAGTGAGAGGATAAAGGGATTATTATGAACACCTG  886

seq1  TATTCCTGTTTGGCCTCTGCACGGGTGAGTGTTCACCTGCACACTCGTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTGTTTGGCCTCTGCACGGGTGAGTGTTCACCTGCACACTCGTTA  936

seq1  GCTATCTATAGGGCTTCCTATAGAAATCAGAATGACACATTAAAAGATGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCTATAGGGCTTCCTATAGAAATCAGAATGACACATTAAAAGATGA  986

seq1  GTCAGCAGTCAGTTCTTCACAGGAGCGATGCTTATGTGCACCCTGCATCC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCAGTCAGTTCTTCACAGGAGCGATGCTTATGTGCACCCTGCATCC  1036

seq1  TTCCTGCTCCATGCTCTAAACCATCACTGTATTTGGTCCAGTGAGCTGAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCTCCATGCTCTAAACCATCACTGTATTTGGTCCAGTGAGCTGAC  1086

seq1  TCTGTGGGTAAAGGTGCTTACTACCAAGTCTGGCAGCCTGGGTTCAATCC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGGTAAAGGTGCTTACTACCAAGTCTGGCAGCCTGGGTTCAATCC  1136

seq1  CTAAGACCCACATGGTAGGAAAAGAGAACCAGATTCCACAAGTTATCCTC  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGACCCACATGGTAGGAAAAGAGAACCAGATTCCACAAGTTATCCTC  1186

seq1  TGAATTC  1205
      |||||||
seq2  TGAATTC  1193