BAC Information

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BAC

Clone NameB6Ng01-167D22
Chromosome12 (Build37)
Map Location 58,207,997 - 58,209,118
singlet/doubletsinglet
Overlap geneSlc25a21
Upstream geneLOC382601, Mbip, EG621837, E030019B13Rik, Titf1, LOC100039993, Nkx2-9, Pax9
Downstream geneAU021838, LOC100040044, Foxa1, 4921506M07Rik, EG217600, BC042761
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167D22.bB6Ng01-167D22.g
ACCDH958793DH958794
length2761,125
definitionDH958793|Mus musculus domesticus DNA, BAC clone: B6Ng01-167D22, 5' end.DH958794|Mus musculus domesticus DNA, BAC clone: B6Ng01-167D22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tatcagaccttcaaagaagacccaattccaattctcctcaaatgattcca
caaaatagaaacagaaggaacatttccacaattcgttctatggtgccata
attacacttgtacctaaactacacaaagatccaacaaagaaagagaactt
cagaccaatttcccttatgaatatcgatgcaaaaatactcaataaaattc
tagatctatgccccagtataggggaatgccaggaccaggaatgggagtgg
atgggttggggagcatggggaggggg
gaattcatctgctctctgggatggtctcttgcaaagtttgcctccggatg
acataattactaagtatcttagatgaccagcttaaaacactaaggagtgg
ggctcagtagaaattagaagtatgttgagaaagggttcaagactcaggag
tgaataagcagcaggctccattccgggaagctctgaagaacagtctcaag
ttcaagtgctgctaatgagatccagcagtgggcaaacaaggttagaaggc
attgggccagagaaatcatttagctaaaagatgcattttacttctctctt
tttatacagttgactgaatatgtgtgctctcctaaaagtcatatgttaaa
ataactaacctcaaaagggcagtggtgagacctgatttaggccacaagga
actagagtcctcatgattaggatacctcaaagtctagttttctttctgga
agatagccttcagcaaacactggcacccagacctcagacttctgttctct
agaacggtaagatctgcatttctcttaaaccttctagattacggcgtttt
tgttacagcatcttgagctgacgaagatttttcttcagaataattataac
aatgaagcatagcggggtacaaactacgctgaagtgagatagaaattaga
gtacctacgtagtcattggttgccaagtcttccaatgtttcattgaaaag
tcagaaatttgatctaatgtgaatttttcctgttttcaaaaacactgcaa
tttgcttctttaatataaacccatgaagatgaagcctaagtatgccaagt
gtaacagagcccaaggtcagtgtggctcatggccacggcagcaaccttgt
cagagagactccaagctctcttaacattagaaaatgggagacgccaccca
cctgcaaggcaaaaactagagacagacagagatttctggacgtggcctaa
ccactgttcacactcattcactcactgagtctctggtgccctgcacacac
ctgtacaaggatcaatgcagttagcccttcagcataggtaaggggaaggc
ctcacaagagcctacttctagctgaaggagggtgtggataggttggtggc
tgctgatgaaaggagagcaaatgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_58207997_58209118
seq2: B6Ng01-167D22.g_67_1191

seq1  GAATTCATCTGCTCTCTGGGATGGTCTCTTGCAAAGTTTGCCTCCGGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTGCTCTCTGGGATGGTCTCTTGCAAAGTTTGCCTCCGGATG  50

seq1  ACATAATTACTAAGTATCTTAGATGACCAGCTTAAAACACTAAGGAGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATTACTAAGTATCTTAGATGACCAGCTTAAAACACTAAGGAGTGG  100

seq1  GGCTCAGTAGAAATTAGAAGTATGTTGAGAAAGGGTTCAAGACTCAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGTAGAAATTAGAAGTATGTTGAGAAAGGGTTCAAGACTCAGGAG  150

seq1  TGAATAAGCAGCAGGCTCCATTCCGGGAAGCTCTGAAGAACAGTCTCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAGCAGCAGGCTCCATTCCGGGAAGCTCTGAAGAACAGTCTCAAG  200

seq1  TTCAAGTGCTGCTAATGAGATCCAGCAGTGGGCAAACAAGGTTAGAAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTGCTGCTAATGAGATCCAGCAGTGGGCAAACAAGGTTAGAAGGC  250

seq1  ATTGGGCCAGAGAAATCATTTAGCTAAAAGATGCATTTTACTTCTCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGCCAGAGAAATCATTTAGCTAAAAGATGCATTTTACTTCTCTCTT  300

seq1  TTTATACAGTTGACTGAATATGTGTGCTCTCCTAAAAGTCATATGTTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACAGTTGACTGAATATGTGTGCTCTCCTAAAAGTCATATGTTAAA  350

seq1  ATAACTAACCTCAAAAGGGCAGTGGTGAGACCTGATTTAGGCCACAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTAACCTCAAAAGGGCAGTGGTGAGACCTGATTTAGGCCACAAGGA  400

seq1  ACTAGAGTCCTCATGATTAGGATACCTCAAAGTCTAGTTTTCTTTCTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAGTCCTCATGATTAGGATACCTCAAAGTCTAGTTTTCTTTCTGGA  450

seq1  AGATAGCCTTCAGCAAACACTGGCACCCAGACCTCAGACTTCTGTTCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGCCTTCAGCAAACACTGGCACCCAGACCTCAGACTTCTGTTCTCT  500

seq1  AGAACGGTAAGATCTGCATTTCTCTTAAACCTTCTAGATTACGGCGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACGGTAAGATCTGCATTTCTCTTAAACCTTCTAGATTACGGCGTTTT  550

seq1  TGTTACAGCATCTTGAGCTGACGAAGATTTTTCTTCAGAATAATTATAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACAGCATCTTGAGCTGACGAAGATTTTTCTTCAGAATAATTATAAC  600

seq1  AATGAAGCATAGCGGGGTACAAACTACGCTGAAGTGAGATAGAAATTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGCATAGCGGGGTACAAACTACGCTGAAGTGAGATAGAAATTAGA  650

seq1  GTACCTACGTAGTCATTGGTTGCCAAGTCTTCCAATGTTTCATTGAAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTACGTAGTCATTGGTTGCCAAGTCTTCCAATGTTTCATTGAAAAG  700

seq1  TCAGAAATTTGATCTAATGTGAATTTTTCCTGTTTTCAAAAACACTGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATTTGATCTAATGTGAATTTTTCCTGTTTTCAAAAACACTGCAA  750

seq1  TTTGCTTCTTTAATATAAACCCATGAAGATGAAGCCTAAGTATGCCAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTCTTTAATATAAACCCATGAAGATGAAGCCTAAGTATGCCAAGT  800

seq1  GTAACAGAGCCCAAGGTCAGTGTGGCTCATGGCCACGGCAGCAACCTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAGAGCCCAAGGTCAGTGTGGCTCATGGCCACGGCAGCAACCTTGT  850

seq1  CAGAGAGACTCCAAGCTCTCTTAACATTAGAAAATGGGAGACGCCACCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGACTCCAAGCTCTCTTAACATTAGAAAATGGGAGACGCCACCCA  900

seq1  CCTGCAAGGCAAAAACTAGAGACAGACAGAGATTTCTGGACGTGGCCTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAAGGCAAAAACTAGAGACAGACAGAGATTTCTGGACGTGGCCTAA  950

seq1  CCACTGTTCACACTCATTCACTCACTGAGTCTCTGGTGCCCTGCACACAA  1000
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCACTGTTCACACTCATTCACTCACTGAGTCTCTGGTGCCCTGCACAC-A  999

seq1  CCTGTACAA-GATCAATGCAGTTAGCCCTTCAGCATAGGGTAGGGAGAGG  1049
      ||||||||| |||||||||||||||||||||||||||||  ||||  |||
seq2  CCTGTACAAGGATCAATGCAGTTAGCCCTTCAGCATAGGTAAGGGGAAGG  1049

seq1  -CTCACAAGAGCCTACCTCTAGCTG-AGGA-GGTGTGGATA-GTTGGTGG  1095
       ||||||||||||||| |||||||| |||| |||||||||| ||||||||
seq2  CCTCACAAGAGCCTACTTCTAGCTGAAGGAGGGTGTGGATAGGTTGGTGG  1099

seq1  CTGCTGATGACAGGGAGAGCCAATGAA  1122
      |||||||||| | ||||||| ||||||
seq2  CTGCTGATGA-AAGGAGAGCAAATGAA  1125