BAC Information

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BAC

Clone NameB6Ng01-168H14
Chromosome12 (Build37)
Map Location 60,319,448 - 60,477,908
singlet/doubletdoublet
Overlap geneLOC665628, LOC238199, LOC665639
Upstream geneClec14a, LOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33
Downstream geneLOC665644, EG622488
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168H14.bB6Ng01-168H14.g
ACCDH959703DH959704
length1,1631,072
definitionDH959703|Mus musculus domesticus DNA, BAC clone: B6Ng01-168H14, 5' end.DH959704|Mus musculus domesticus DNA, BAC clone: B6Ng01-168H14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,476,738 - 60,477,908)(60,319,448 - 60,320,525)
sequence
gaattctggaacacgtttcttagcattgctgtgactattgatccaggaat
attactgggctccaactcctgctgttagaataagtcattcacattccccc
tcttcgttacatcactagcttaaaagtcaagatctaaaaatggatgagag
tgattgatggagccaacatcacagctcacattccagttggagaaccatca
agaaagtaactatctgcctttcctttgtgtgcaaggggctctatctgcca
tggagctcacaccaagggagaggctccctaaagtatagcagtaggttgtg
acgaatagtacagtttgactcactcatcattcattttaacctcttctgaa
caagttccccaggcatcatcgcaacttcagagatgtacgtgactgggtac
agacctgtgtcacccgaggtggtgatttcatgcaggggaagtaggtcttt
tataagtgtgttgggaaagtgatgtctcataggatgactctgagggaatt
ctgggattaagattcacttgtacgcatgccccataaatttgtacaactat
tatgcatcaattacacaaaacagggactctgaaagtgaaagcagaagagg
aagctgagagctttttgttcttttcattcaatttttatataatcatgaaa
cggatcaggtagaggtattttgatatgagagcctaatatgtcttaaaagt
aaataaaatggtgttggaaccagtgattggtatttcagtggatttgataa
ataagcaaaagacccaatcttaatcttagtagcagtgacagcagggtcct
cattgacccaggtctgtcacatgacttagactgtcatttctacctgcaca
cgattccaagactggttctctagccccgtgccatttcaataaataatcct
cttctcaaatcagtcaaatttggctgtcattactacagctatgaactatc
tagaaattatatgcttatacaggttcatgatggctttggagcttacctta
gaccctactgctgctacccaaatgtggccaaggtgtaaaacatttcactc
tgtttggtcgcctctggtacatgattaataccagtctaaatcccccttca
gtgagacctcatgctcagaattgcagttcctgctttaaaattataaaaga
ttcatgttgtttg
gaattcttataggttaattcttgtaatcatggacatcagcaaggaaactt
actcacctcgtcactatgaattaattacccatcaccaatggtcaaattca
gaatcagaaaaccaccttatttttttgtacaggcctcacccttaactcac
aactttcccacgcataagataatggcattgcccagcagctctagcccatg
gacaagaacggatgaatgaaagcatgcctgagacgctccaggagtcccgt
tatcacctcttctgtctccggaaatagtctggtcaggaacggatagctgc
acctacacaaggccatcctgaggccggccggcacaccccacgggatcttt
cccaaggccagcggaaggccagaccctctcggtccccacgcaagcctacc
tgttgttccggatgctgagcagcacgcacaacaccagctccaagtagatg
cgcagtacttccagccagcgggaggagagctgcagggcctccccgtcttc
ccctccggtgcccgtgtcggtgccgccgccgctaccgccgtcgcccgggc
cgccgcctccgctcagataattctccgcggcgaactcaacccgcagctcc
cgcacgaaccagccgcacttgcgcatgaggaactctagccgcggctgctc
cgcgggcgagacgcggaggcagatgcggagctggggccacagcgctgggt
agaagaggcactcccgccagtgcgagcaggaggccgaggcccgcagccgg
tcgggcgccggcagaaaggagaagatgtgcacgatgagctcgctgggcag
cgacgcgggcgccgggccgcctgcccgcacagagccatccggctcggccg
ccggccgcccgtccccgggccgcctgcgcagttctcgcagcagcccccgg
cagtcggcgcagctgcagcagccgcagcgctgccgccgccgccaccgcac
accggggcggccccggctcgggttcgcgctcccggcggtcggggttgcgg
ccactgacaggacacacatcatgacaggaggaggggcggaccgtcgtgcg
cctcgccggatccagtgcactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_60476738_60477908
seq2: B6Ng01-168H14.b_44_1206 (reverse)

seq1  CAAACAGACATGAATCTCTTATTAAATTTTACAGGCAGGGAACCTGCAAT  50
      |||||| |||||||||| ||||  ||||||| | |||||  | |||||||
seq2  CAAACA-ACATGAATCTTTTAT--AATTTTA-AAGCAGG--AACTGCAAT  44

seq1  TCTGAGCATGA-GTCTCACTGGAGGGGGATTTAGACTGGTTATTAAATCA  99
      ||||||||||| ||||||||| ||||||||||||||||| |||| |||||
seq2  TCTGAGCATGAGGTCTCACTGAAGGGGGATTTAGACTGG-TATT-AATCA  92

seq1  TTGTACCAGA-GCGACCAAACAGAGTTGAAATGTTTTACACCTTGGCCAC  148
       ||||||||| |||||||||||||| ||||||||||||||||||||||||
seq2  -TGTACCAGAGGCGACCAAACAGAG-TGAAATGTTTTACACCTTGGCCAC  140

seq1  ATTTGGGTAGCAGCAGTAGGGTCTAAGGTAAGCTCCAAAGCCATCATGAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGTAGCAGCAGTAGGGTCTAAGGTAAGCTCCAAAGCCATCATGAA  190

seq1  CCTGTATAAGCATATAATTTCTAGATAGTTCATAGCTGTAGTAATGACAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATAAGCATATAATTTCTAGATAGTTCATAGCTGTAGTAATGACAG  240

seq1  CCAAATTTGACTGATTTGAGAAGAGGATTATTTATTGAAATGGCACGGGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTTGACTGATTTGAGAAGAGGATTATTTATTGAAATGGCACGGGG  290

seq1  CTAGAGAACCAGTCTTGGAATCGTGTGCAGGTAGAAATGACAGTCTAAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAACCAGTCTTGGAATCGTGTGCAGGTAGAAATGACAGTCTAAGT  340

seq1  CATGTGACAGACCTGGGTCAATGAGGACCCTGCTGTCACTGCTACTAAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGACAGACCTGGGTCAATGAGGACCCTGCTGTCACTGCTACTAAGA  390

seq1  TTAAGATTGGGTCTTTTGCTTATTTATCAAATCCACTGAAATACCAATCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATTGGGTCTTTTGCTTATTTATCAAATCCACTGAAATACCAATCA  440

seq1  CTGGTTCCAACACCATTTTATTTACTTTTAAGACATATTAGGCTCTCATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTCCAACACCATTTTATTTACTTTTAAGACATATTAGGCTCTCATA  490

seq1  TCAAAATACCTCTACCTGATCCGTTTCATGATTATATAAAAATTGAATGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATACCTCTACCTGATCCGTTTCATGATTATATAAAAATTGAATGA  540

seq1  AAAGAACAAAAAGCTCTCAGCTTCCTCTTCTGCTTTCACTTTCAGAGTCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACAAAAAGCTCTCAGCTTCCTCTTCTGCTTTCACTTTCAGAGTCC  590

seq1  CTGTTTTGTGTAATTGATGCATAATAGTTGTACAAATTTATGGGGCATGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTGTGTAATTGATGCATAATAGTTGTACAAATTTATGGGGCATGC  640

seq1  GTACAAGTGAATCTTAATCCCAGAATTCCCTCAGAGTCATCCTATGAGAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGTGAATCTTAATCCCAGAATTCCCTCAGAGTCATCCTATGAGAC  690

seq1  ATCACTTTCCCAACACACTTATAAAAGACCTACTTCCCCTGCATGAAATC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTTCCCAACACACTTATAAAAGACCTACTTCCCCTGCATGAAATC  740

seq1  ACCACCTCGGGTGACACAGGTCTGTACCCAGTCACGTACATCTCTGAAGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCTCGGGTGACACAGGTCTGTACCCAGTCACGTACATCTCTGAAGT  790

seq1  TGCGATGATGCCTGGGGAACTTGTTCAGAAGAGGTTAAAATGAATGATGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGATGATGCCTGGGGAACTTGTTCAGAAGAGGTTAAAATGAATGATGA  840

seq1  GTGAGTCAAACTGTACTATTCGTCACAACCTACTGCTATACTTTAGGGAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCAAACTGTACTATTCGTCACAACCTACTGCTATACTTTAGGGAG  890

seq1  CCTCTCCCTTGGTGTGAGCTCCATGGCAGATAGAGCCCCTTGCACACAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCTTGGTGTGAGCTCCATGGCAGATAGAGCCCCTTGCACACAAA  940

seq1  GGAAAGGCAGATAGTTACTTTCTTGATGGTTCTCCAACTGGAATGTGAGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGCAGATAGTTACTTTCTTGATGGTTCTCCAACTGGAATGTGAGC  990

seq1  TGTGATGTTGGCTCCATCAATCACTCTCATCCATTTTTAGATCTTGACTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGTTGGCTCCATCAATCACTCTCATCCATTTTTAGATCTTGACTT  1040

seq1  TTAAGCTAGTGATGTAACGAAGAGGGGGAATGTGAATGACTTATTCTAAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCTAGTGATGTAACGAAGAGGGGGAATGTGAATGACTTATTCTAAC  1090

seq1  AGCAGGAGTTGGAGCCCAGTAATATTCCTGGATCAATAGTCACAGCAATG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAGTTGGAGCCCAGTAATATTCCTGGATCAATAGTCACAGCAATG  1140

seq1  CTAAGAAACGTGTTCCAGAATTC  1171
      |||||||||||||||||||||||
seq2  CTAAGAAACGTGTTCCAGAATTC  1163

seq1: chr12_60319448_60320525
seq2: B6Ng01-168H14.g_65_1136

seq1  GAATTCTTATAGGTTAATTCTTGTAATCATGGACATCAGCAAGGAAACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATAGGTTAATTCTTGTAATCATGGACATCAGCAAGGAAACTT  50

seq1  ACTCACCTCGTCACTATGAATTAATTACCCATCACCAATGGTCAAATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACCTCGTCACTATGAATTAATTACCCATCACCAATGGTCAAATTCA  100

seq1  GAATCAGAAAACCACCTTATTTTTTTGTACAGGCCTCACCCTTAACTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAGAAAACCACCTTATTTTTTTGTACAGGCCTCACCCTTAACTCAC  150

seq1  AACTTTCCCACGCATAAGATAATGGCATTGCCCAGCAGCTCTAGCCCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCCCACGCATAAGATAATGGCATTGCCCAGCAGCTCTAGCCCATG  200

seq1  GACAAGAACGGATGAATGAAAGCATGCCTGAGACGCTCCAGGAGTCCCGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGAACGGATGAATGAAAGCATGCCTGAGACGCTCCAGGAGTCCCGT  250

seq1  TATCACCTCTTCTGTCTCCGGAAATAGTCTGGTCAGGAACGGATAGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACCTCTTCTGTCTCCGGAAATAGTCTGGTCAGGAACGGATAGCTGC  300

seq1  ACCTACACAAGGCCATCCTGAGGCCGGCCGGCACACCCCACGGGATCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACACAAGGCCATCCTGAGGCCGGCCGGCACACCCCACGGGATCTTT  350

seq1  CCCAAGGCCAGCGGAAGGCCAGACCCTCTCGGTCCCCACGCAAGCCTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGCCAGCGGAAGGCCAGACCCTCTCGGTCCCCACGCAAGCCTACC  400

seq1  TGTTGTTCCGGATGCTGAGCAGCACGCACAACACCAGCTCCAAGTAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTCCGGATGCTGAGCAGCACGCACAACACCAGCTCCAAGTAGATG  450

seq1  CGCAGTACTTCCAGCCAGCGGGAGGAGAGCTGCAGGGCCTCCCCGTCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGTACTTCCAGCCAGCGGGAGGAGAGCTGCAGGGCCTCCCCGTCTTC  500

seq1  CCCTCCGGTGCCCGTGTCGGTGCCGCCGCCGCTACCGCCGTCGCCCGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCGGTGCCCGTGTCGGTGCCGCCGCCGCTACCGCCGTCGCCCGGGC  550

seq1  CGCCGCCTCCGCTCAGATAATTCTCCGCGGCGAACTCAACCCGCAGCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCGCCTCCGCTCAGATAATTCTCCGCGGCGAACTCAACCCGCAGCTCC  600

seq1  CGCACGAACCAGCCGCACTTGCGCATGAGGAACTCTAGCCGCGGCTGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACGAACCAGCCGCACTTGCGCATGAGGAACTCTAGCCGCGGCTGCTC  650

seq1  CGCGGGCGAGACGCGGAGGCAGATGCGGAGCTGGGGCCACAGCGCTGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGGGCGAGACGCGGAGGCAGATGCGGAGCTGGGGCCACAGCGCTGGGT  700

seq1  AGAAGAGGCACTCCCGCCAGTGCGAGCAGGAGGCCGAGGCCCGCAGCCGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGCACTCCCGCCAGTGCGAGCAGGAGGCCGAGGCCCGCAGCCGG  750

seq1  TCGGGCGCCGGCAGAAAGGAGAAGATGTGCACGATGAGCTCGCTGGGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGCGCCGGCAGAAAGGAGAAGATGTGCACGATGAGCTCGCTGGGCAG  800

seq1  CGACGC-GGCGCC-GGCCGCCTGCCCGCACAGAGCCATCCGGCTCGGCCG  848
      |||||| |||||| ||||||||||||||||||||||||||||||||||||
seq2  CGACGCGGGCGCCGGGCCGCCTGCCCGCACAGAGCCATCCGGCTCGGCCG  850

seq1  CCGGCCGCCCGTCCCC-GGCCGCCTGCGCAGTCCTCGCAGCAGCCCCC-G  896
      |||||||||||||||| ||||||||||||||| ||||||||||||||| |
seq2  CCGGCCGCCCGTCCCCGGGCCGCCTGCGCAGTTCTCGCAGCAGCCCCCGG  900

seq1  CAGCCGGCGCAGCTGCAGCAGCCGCAGCCGCTGCCGCCGCCGCCACCGCA  946
      ||| ||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CAGTCGGCGCAGCTGCAGCAGCCGCAG-CGCTGCCGCCGCCGCCACCGCA  949

seq1  CCAACCGGGCGGCCCCGGCTCGGGTTCGCGCTCCCGGCGGTCGGGGTTGC  996
       || | ||||||||||||||||||||||||||||||||||||||||||||
seq2  -CACCGGGGCGGCCCCGGCTCGGGTTCGCGCTCCCGGCGGTCGGGGTTGC  998

seq1  GG-CACTGACAAGAACAACAACATCAATGACAAGGAAGAAGGGGGCGGAA  1045
      || ||||||| || |||   ||||| ||||| |||| ||  ||||||| |
seq2  GGCCACTGAC-AGGACA--CACATC-ATGAC-AGGAGGA--GGGGCGG-A  1040

seq1  CCGTCGTGCGCCTCGGCGGAACCAAGTGCACTC  1078
      ||||||||||||||| |||| || |||||||||
seq2  CCGTCGTGCGCCTCGCCGGATCC-AGTGCACTC  1072