BAC Information

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BAC

Clone NameB6Ng01-169F10
Chromosome12 (Build37)
Map Location 50,547,890 - 50,548,358
singlet/doubletsinglet
Overlap genenone
Upstream geneGm1818, GA_x5J8B7W54VK-284379-285078, Olfr1399-ps1, EG665036, LOC100039366, Foxg1, ENSMUSG00000045946, LOC100039424
Downstream geneLOC665071, LOC665077, LOC100039455, Prkcm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169F10.bB6Ng01-169F10.g
ACCDH960345DH960346
length4631,169
definitionDH960345|Mus musculus domesticus DNA, BAC clone: B6Ng01-169F10, 5' end.DH960346|Mus musculus domesticus DNA, BAC clone: B6Ng01-169F10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tgggaatgtttcagaggtaatgtaaatgctagagccctcagagccagcca
gcataggtgattgttggggattgggctgtggatcagagaggggttccaat
ttgtcagtagtcatactcaaaggaaaaacaaggagaaattaaattcagat
ctcgatctctctctctctctctctctctctctctctctctctctctctct
ctctctctctctctcttcctccctccctgtatccttctttctttcctatc
tagtaatatggggtgaaactgggaggataaggggcggggaataaagatga
accctcaaaataggaaaagacccgttgtagatgtctctcaactccaatat
ctcgcttttgctggcatacctccatgattctagcccaagaaagcatcatt
gtctgatctggaaaactgccctctgaggtgtctgggtttctgagctgtct
ctggatcctgata
gaattctcacctgaggaataccgaatggcagagaagcacctaaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggttaagatcaaaaactcaggtgacagc
agatgctggcaaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatacagaagatgtcccaactggtaagaagaacacatgctccactat
gttcatagcagccttgtttatgatagccagaaggtggaaagaacacagat
gccccttaacagaggaatgaatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaaaatgaatttgtgaaattcctaggcaaa
tggatggacctggagggtatcatcctgagtgaagtaaccgaatcacaaag
gaactcgcacaatatgtactcactgataagtggatattagcccagaaact
taggatacccaagatataagatacaacttgccaaacacatgaaattcaag
aagaacgaagaccaaagtgtggatgctttacctttcttagaaatgggaac
aaaacacccatggaaggagttacagagacaaaatttggagctgtgataaa
aggatggaccatctagtgattgccatatgcagggatccatcccataatca
gcttccaaatgctggcaccattgcatacactagcaagattttgctgaaag
gacccagatatagctctctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgatcagagtcagcttattagatgggtcacacggacccaa
tggaggagctagagaattacccagagctaatgggaactgcacactatagt
gaacaacaatattgactaccagtaccctggagctcttgtcttagctgcaa
tatgtatcaaagaatgcctagtcgccatcactgccaagagaaggtccatt
ggtattcaacttatatgccccagtacaggtacgctatggccaaaagggga
tgtgtgtggtatgagatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_50547890_50548358
seq2: B6Ng01-169F10.b_47_515 (reverse)

seq1  TATCAGGATCCAGTGACTGCTCAGAAACCCAGACACCTCAGAGGGCAGTT  50
      ||||||||||||| ||| ||||||||||||||||||||||||||||||||
seq2  TATCAGGATCCAGAGACAGCTCAGAAACCCAGACACCTCAGAGGGCAGTT  50

seq1  TTCCAGATCAGACAATGATGCTCTGCTGGGCAAGAATCATGGAGCTATGC  100
      |||||||||||||||||||||| |  ||||| |||||||||||| |||||
seq2  TTCCAGATCAGACAATGATGCTTTCTTGGGCTAGAATCATGGAGGTATGC  100

seq1  CAGCAAAAAGGAGATCTTGGAGCTGAGAGACATCTGCAATTGGTCTTTTA  150
      ||||||||  ||||| |||||| |||||||||||| |||  |||||||| 
seq2  CAGCAAAAGCGAGATATTGGAGTTGAGAGACATCTACAACGGGTCTTTTC  150

seq1  CTATTTTGTGGGTTCATCTTTATTCCCCGCCCCTTATCCTCCCAGTTTCA  200
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTGAGGGTTCATCTTTATTCCCCGCCCCTTATCCTCCCAGTTTCA  200

seq1  CCCCATATTACTAGATAGGAAAGAAAGAAGGATACAGGGAGGGAGGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATATTACTAGATAGGAAAGAAAGAAGGATACAGGGAGGGAGGAAGA  250

seq1  GAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  300
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  300

seq1  GAGAGAGATCGAGATCTGAATTTAATTTCTCCTTGTTTTTCCTTTGAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGATCGAGATCTGAATTTAATTTCTCCTTGTTTTTCCTTTGAGTA  350

seq1  TGACTACTGACAAATTGGAACCCCTCTCTGATCCACAGCCCAATCCCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTACTGACAAATTGGAACCCCTCTCTGATCCACAGCCCAATCCCCAA  400

seq1  CAATCACCTATGCTGGCTGGCTCTGAGGGCTCTAGCATTTACATTACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACCTATGCTGGCTGGCTCTGAGGGCTCTAGCATTTACATTACCTC  450

seq1  TGAAACATTCCCAGAATTC  469
      |||||||||||||||||||
seq2  TGAAACATTCCCAGAATTC  469