BAC Information

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BAC

Clone NameB6Ng01-171L09
Chromosome12 (Build37)
Map Location 21,468,206 - 21,469,198
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042755, LOC100043377, LOC625810, 1700030C10Rik, 3110053B16Rik, LOC668698, LOC546752, EG629257, Ddef2, Itgb1bp1, Cpsf3, Iah1, Adam17, Ywhaq, LOC100043407
Downstream geneLOC100042796, 6030426L16Rik, LOC434693, EG668645, EG668646, LOC100043416, LOC668650, EG668496, LOC668653
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171L09.bB6Ng01-171L09.g
ACCGA000518GA000519
length1,1741,001
definitionB6Ng01-171L09.b B6Ng01-171L09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccgaggaataccgaaaggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaacgcaagtcaaaacaaccctgagat
tccaccttataccagtcagaatggctaagatcaaagattcagatgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgctagtg
ggattgcaagctggtacaaccactctggaaatcagtttagcagttcctta
gaaaattggacatagtactactagaagatccagcaatacctctcctggac
atatacccagaagatgttcccacttgtaataaggacacatgctgcactat
gtccataacagccttatttataatagccagaagctggaaagaacacagat
gtccctcaacagaaaaaaggatacagaaaatgtggtatatttacacaatg
gagtactactcagctattaaaaacaatgaattcatgaaattcttaggcaa
atagatgcaccgggaggatatcatcctgagttaggtaacccaatcacgaa
agaacacacatgatatgcactcactgataagtggatattatcccagaagc
tttgaatacccaagatacaattcacaaaccacatgaaactcaagaagaag
gaagaccaaagtgtggatacttcgttccttcttagaatgtgaccaaaata
cccatggaatgagttgtagagacaaagtttggagcagagcctgaaggaac
gactattcagaacgactgccccacttggggatccatcccataaaccacta
ccaaacccagtcactaggcagatgccaacaagagcctgctgacaggcgca
tgatatagctgtctcctgtgaggccctgccagtggctggcaaatacagaa
gtggatgctcacagtcatctatgggatggagtacaaggtcccccatgatg
gagccagagaattacccaggaacagaagggactgagcccatagatgacat
caacatgactacccagtacccccagagctcctggaaagaaaaacccatgt
tgaactgtgatctagctatatttataggaaacgatctctagtcgtcatca
ttggcagaaagtctggtcctgtagcctagcctcagtaggcaatgcatgta
cagcaattgcactggtgggtactg
gaattccagagttggagacaggagaccagaagttccaggtcatttttgag
tgcacagtaaatttgaagccagcctcaaagagcttgtctcaaaaacaaac
aaacaaacaaacaaacaaaacacacaaaaaccccccaaaaaacaaaaaca
acaacaacaacaaaaaaaccctgcaaggctgggtgtggtggcacacacct
ttagtcccagcatttgggaggcagaggcaggtggatctctgtgagtttaa
ggccagcctagtctagagagtgagttccaggacatccaggatacacaaag
aaacccagtcttgaaaatcaaattaaccaaaccaactaaacaaataaaca
aaaagcaaactaacaaccactgagaatcataaacagcacagtgaagggaa
actagtttgcctaagtccaaggctaggaaaatgaaagcgaaagcaaaagg
aggaagtgttttacagttgaccttgactgaaacaaacatatgtacaaata
agggcatggtgaactggcagaaactcagggaggggtcaatccggaaccag
gtgcaagggctgtaagtcctcgttatttggggtttcactgccaggcagaa
aacaggatgcccaatgaagtccaggtttcagcaaaacaaagggtttttag
tggccatctttatactaaagagtcattcattgtgtaactgaaatttaaat
ataactggacatgctgtgctctgctcacctttactaaatctggcaatctt
tttatggtgttgttgttgttgttgttgtttaaggacagggtctcattgta
tccaggccagcctcaaattcaaattggctttaggatgaccttaagcttct
gatttatatcgcctctgtcctttgaattctggatcataggtgtgtttcgc
catgccctgatcaatgcatatttaggagaacctaggactttgtgattgcc
aggcaacttgaagaaaccacttgcatcctggcagttcttgaacaagaaac
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_21468206_21469198
seq2: B6Ng01-171L09.g_66_1066

seq1  GAATTCCAGAGTTGGAGACAGGAGACCAGAAGTTCCAGGTCATTTTTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGTTGGAGACAGGAGACCAGAAGTTCCAGGTCATTTTTGAG  50

seq1  TGCACAGTAAATTTGAAGCCAGCCTCAAAGAGCTTGTCTCAAAAACAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGTAAATTTGAAGCCAGCCTCAAAGAGCTTGTCTCAAAAACAAAC  100

seq1  AAACAAACAAACAAACAAAACACACAAAAACCCCCCAAAAAACAAAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAACAAACAAAACACACAAAAACCCCCCAAAAAACAAAAACA  150

seq1  ACAACAACAACAAAAAAACCCTGCAAGGCTGGGTGTGGTGGCACACACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACAACAAAAAAACCCTGCAAGGCTGGGTGTGGTGGCACACACCT  200

seq1  TTAGTCCCAGCATTTGGGAGGCAGAGGCAGGTGGATCTCTGTGAGTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCCCAGCATTTGGGAGGCAGAGGCAGGTGGATCTCTGTGAGTTTAA  250

seq1  GGCCAGCCTAGTCTAGAGAGTGAGTTCCAGGACATCCAGGATACACAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCCTAGTCTAGAGAGTGAGTTCCAGGACATCCAGGATACACAAAG  300

seq1  AAACCCAGTCTTGAAAATCAAATTAACCAAACCAACTAAACAAATAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAGTCTTGAAAATCAAATTAACCAAACCAACTAAACAAATAAACA  350

seq1  AAAAGCAAACTAACAACCACTGAGAATCATAAACAGCACAGTGAAGGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAAACTAACAACCACTGAGAATCATAAACAGCACAGTGAAGGGAA  400

seq1  ACTAGTTTGCCTAAGTCCAAGGCTAGGAAAATGAAAGCGAAAGCAAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTTGCCTAAGTCCAAGGCTAGGAAAATGAAAGCGAAAGCAAAAGG  450

seq1  AGGAAGTGTTTTACAGTTGACCTTGACTGAAACAAACATATGTACAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTGTTTTACAGTTGACCTTGACTGAAACAAACATATGTACAAATA  500

seq1  AGGGCATGGTGAACTGGCAGAAACTCAGGGAGGGGTCAATCCGGAACCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATGGTGAACTGGCAGAAACTCAGGGAGGGGTCAATCCGGAACCAG  550

seq1  GTGCAAGGGCTGTAAGTCCTCGTTATTTGGGGTTTCACTGCCAGGCAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAGGGCTGTAAGTCCTCGTTATTTGGGGTTTCACTGCCAGGCAGAA  600

seq1  AACAGGATGCCCAATGAAGTCCAGGTTTCAGCAAAACAAAGGGTTTTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGATGCCCAATGAAGTCCAGGTTTCAGCAAAACAAAGGGTTTTTAG  650

seq1  TGGCCATCTTTATACTAAAGAGTCATTCATTGTGTAACTGAAATTTAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCATCTTTATACTAAAGAGTCATTCATTGTGTAACTGAAATTTAAAT  700

seq1  ATAACTGGACATGCTGTGCTCTGCTCACCTTTACTAAATCTGGCAATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGGACATGCTGTGCTCTGCTCACCTTTACTAAATCTGGCAATCTT  750

seq1  TTTATGGTGTTGTTGTTGTTGTTGTTGTTTAAGGACAGGGTCTCATTGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGTGTTGTTGTTGTTGTTGTTGTTTAAGGACAGGGTCTCATTGTA  800

seq1  TCCAGGCCAGCCTCAAATTCAAATTGGC-TTAGGATGACCTTAAGCTTCT  849
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCCAGGCCAGCCTCAAATTCAAATTGGCTTTAGGATGACCTTAAGCTTCT  850

seq1  GA-TTATATCGCCTCTGTCC-TTGAATTCTGGGATCATAGGTGTGTTTCG  897
      || ||||||||||||||||| ||||||||| |||||||||||||||||||
seq2  GATTTATATCGCCTCTGTCCTTTGAATTCT-GGATCATAGGTGTGTTTCG  899

seq1  CCATG-CCTGATCAATGCATAATTAGGAGAACCTAGGACTTTGTGAATGC  946
      ||||| ||||||||||||||| |||||||||||||||||||||||| |||
seq2  CCATGCCCTGATCAATGCATATTTAGGAGAACCTAGGACTTTGTGATTGC  949

seq1  CAGGCAACT--GAGAAA-CAC-TGCATCCTGGCAG-TCTTGAACAAGAAA  991
      |||||||||   ||||| ||| ||||||||||||| ||||||||||||||
seq2  CAGGCAACTTGAAGAAACCACTTGCATCCTGGCAGTTCTTGAACAAGAAA  999

seq1  CC  993
      ||
seq2  CC  1001