BAC Information

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BAC

Clone NameB6Ng01-171O04
Chromosome12 (Build37)
Map Location 79,282,533 - 79,283,713
singlet/doubletsinglet
Overlap genenone
Upstream geneFut8, LOC230765, LOC666659
Downstream geneEG626215, Gphn, 4921509E07Rik, Mpp5, Atp6v1d, LOC100041878, Eif2s1, Plek2, 6330442E10Rik, Plekhh1, Pigh, LOC666722, Arg2, Vti1b, Rdh11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171O04.bB6Ng01-171O04.g
ACCGA000651GA000652
length3891,157
definitionB6Ng01-171O04.b B6Ng01-171O04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcacctgaggaataccgaatggcagagaagcacctgaaaaaatgttcaac
atccttaatcatcagggaaatgcaaatcaaaacaaccctgagattccacc
tcacaccagtgagaatggctaagatcaaaaattcaggtgacagtagatgc
tggcgaggatgtggagaaagaggaacactcctccattgttggtgggattg
caggcttgtacaaccactctggaaatcagtctggcggttcctcagaaaat
tggacatagtactaccggaggatccagcaatacctctcctgggcatatat
ccagaattcattgtttttaatagctgaggagtactctattgtgtaaatgt
accacattttctgtccattactctgttgagggacatcta
gaattccaaggttttccatttaccaagatggagatgctagaaatggttgc
tagggaagcctggaaacttgctaagtcattgcccttgcctcaggccaggt
gctcccccaccccctcccacccccaggcggcagcttctgatggtgggcag
cttctgattggctgcctgaggtctgggggttttccagtaactgacttgag
gaattctgggaaacagagatggccgacctagtctcctgaactgccagttt
gaagcctgcctcagtcctctcacttggttgtcagaaattttccaagtgac
ttgactagaagaattttgttttcaattttatattatttttataaatatgt
gtttccataatttcttttatactatactttttctttttgattttaaggta
cttcattttaaacaatttcacgatactgaccttttggcccattctgccgt
tatacaagccataaatgctcactgagcaaccatgacgctccctttagtag
catatttgaaaagcatactcattatatttgctatttataatatgatttga
ttttataagaacaaagtttttattttataggtttataggtgctagttaga
gaaacaagaatttcgtaaaaaatggaaaaatgacatttattttttaaaaa
ataatcttgactttagttcattttccagacgtccaaacatacttgacatt
gcatttttagcatctcctcttttttctttaacatccctaaaatattattt
tattctccattaaatgtcactgcatggatacatcacaatttatttgttta
tccacctattcttagacatttaggtcatttccaactttcacaaatatata
actaatcttcattaaccttgcatctatcaaacttctgtaaagccaaccac
aaaaaattacatttctgagataaatactaaaggggctggttattctagtc
agttaataaagtgcctgcatgcagcagaaactgagtttatatctccatta
cttacaataaaagcaactgagtagcgcatgcttacacacaggcactggag
cgagcagcagaatccctggagctctcagtcagtaggcccatgatccctta
gctcaggattatggagacctgttcacaggtaagtggagagttggggaatc
tggacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_79282533_79283713
seq2: B6Ng01-171O04.g_62_1218

seq1  GAATTCCAAGGTTTTCCATTTACCAAGATGGAGATGCTAGAAATGGTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGGTTTTCCATTTACCAAGATGGAGATGCTAGAAATGGTTGC  50

seq1  TAGGGAAGCCTGGAAACTTGCTAAGTCATTGCCCTTGCCTCAGGCCAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAAGCCTGGAAACTTGCTAAGTCATTGCCCTTGCCTCAGGCCAGGT  100

seq1  GCTCCCCCACCCCCTCCCACCCCCAGGCGGCAGCTTCTGATGGTGGGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCCACCCCCTCCCACCCCCAGGCGGCAGCTTCTGATGGTGGGCAG  150

seq1  CTTCTGATTGGCTGCCTGAGGTCTGGGGGTTTTCCAGTAACTGACTTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATTGGCTGCCTGAGGTCTGGGGGTTTTCCAGTAACTGACTTGAG  200

seq1  GAATTCTGGGAAACAGAGATGGCCGACCTAGTCTCCTGAACTGCCAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGAAACAGAGATGGCCGACCTAGTCTCCTGAACTGCCAGTTT  250

seq1  GAAGCCTGCCTCAGTCCTCTCACTTGGTTGTCAGAAATTTTCCAAGTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTGCCTCAGTCCTCTCACTTGGTTGTCAGAAATTTTCCAAGTGAC  300

seq1  TTGACTAGAAGAATTTTGTTTTCAATTTTATATTATTTTTATAAATATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTAGAAGAATTTTGTTTTCAATTTTATATTATTTTTATAAATATGT  350

seq1  GTTTCCATAATTTCTTTTATACTATACTTTTTCTTTTTGATTTTAAGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCATAATTTCTTTTATACTATACTTTTTCTTTTTGATTTTAAGGTA  400

seq1  CTTCATTTTAAACAATTTCACGATACTGACCTTTTGGCCCATTCTGCCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTTAAACAATTTCACGATACTGACCTTTTGGCCCATTCTGCCGT  450

seq1  TATACAAGCCATAAATGCTCACTGAGCAACCATGACGCTCCCTTTAGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAAGCCATAAATGCTCACTGAGCAACCATGACGCTCCCTTTAGTAG  500

seq1  CATATTTGAAAAGCATACTCATTATATTTGCTATTTATAATATGATTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTGAAAAGCATACTCATTATATTTGCTATTTATAATATGATTTGA  550

seq1  TTTTATAAGAACAAAGTTTTTATTTTATAGGTTTATAGGTGCTAGTTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAAGAACAAAGTTTTTATTTTATAGGTTTATAGGTGCTAGTTAGA  600

seq1  GAAACAAGAATTTCGTAAAAAATGGAAAAATGACATTTATTTTTTAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAGAATTTCGTAAAAAATGGAAAAATGACATTTATTTTTTAAAAA  650

seq1  ATAATCTTGACTTTAGTTCATTTTCCAGACGTCCAAACATACTTGACATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTTGACTTTAGTTCATTTTCCAGACGTCCAAACATACTTGACATT  700

seq1  GCATTTTTAGCATCTCCTCTTTTTTCTTTAACATCCCTAAAATATTATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTTAGCATCTCCTCTTTTTTCTTTAACATCCCTAAAATATTATTT  750

seq1  TATTCTCCATTAAATGTCACTGCATGGATACATCACAATTTATTTGTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCCATTAAATGTCACTGCATGGATACATCACAATTTATTTGTTTA  800

seq1  TCCACCTATTCTTAGACATTTAGGTCATTTCCAACTTTCACAAATATATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTATTCTTAGACATTTAGGTCATTTCCAACTTTCACAAATATATA  850

seq1  ACTAATCTTCATTAACCTTTGCATCTATCAAACTTCTGTAAAGCCAACCA  900
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACTAATCTTCATTAACC-TTGCATCTATCAAACTTCTGTAAAGCCAACCA  899

seq1  C-AAAAATTACAATTTCTGAGATAAATACTAAGGGGGCTGGTTATTCTAG  949
      | ||||||||| |||||||||||||||||||| |||||||||||||||||
seq2  CAAAAAATTAC-ATTTCTGAGATAAATACTAAAGGGGCTGGTTATTCTAG  948

seq1  TCAGTTAATAAAGTGCCTGCCATGCAAGCAAGAAACTGAGTTTATATCTC  999
      ||||||||||||||||||| ||||| ||| ||||||||||||||||||||
seq2  TCAGTTAATAAAGTGCCTG-CATGC-AGC-AGAAACTGAGTTTATATCTC  995

seq1  AATTACTTACATAAAAAGCCAAACTGAGTAGCGCATGCCTACAACCACA-  1048
       ||||||||||  ||||||  ||||||||||||||||| ||||  |||| 
seq2  CATTACTTACAATAAAAGC--AACTGAGTAGCGCATGCTTACA--CACAG  1041

seq1  GCACTGGGAAGGCAGAGGCAAGCAG-ATCCCTGGAGCTCTCAGGTCAGTA  1097
      |||||||      || |   ||||| |||||||||||||||| |||||||
seq2  GCACTGG------AGCGAGCAGCAGAATCCCTGGAGCTCTCA-GTCAGTA  1084

seq1  GGCCCATGATCACTTAGCTCAAGATTTAATGAGAGACCTGTCTCAACAAG  1147
      ||||||||||| ||||||||| ||||  ||| ||||||||| || ||| |
seq2  GGCCCATGATCCCTTAGCTCAGGATT--ATG-GAGACCTGT-TC-ACAGG  1129

seq1  TACAGTGGAGAGTAATTGGGGGGAAATCT-GACAT  1181
      || |||||||||   ||||||   ||||| |||||
seq2  TA-AGTGGAGAG---TTGGGG---AATCTGGACAT  1157