BAC Information

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BAC

Clone NameB6Ng01-173A13
Chromosome12 (Build37)
Map Location 63,193,394 - 63,194,398
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040300, LOC665677, Nanog-ps2, Lrfn5, LOC665699, LOC665707, LOC100040403
Downstream geneLOC665713, LOC622746, LOC100040438, 1700047L15Rik, Tspyl-ps, EG665741, EG382606
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173A13.bB6Ng01-173A13.g
ACCGA001491GA001492
length1,001247
definitionB6Ng01-173A13.b B6Ng01-173A13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaactgagtaatactgaatgactgagaaccacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcatatcaaaacaaccttgagat
tccacctcatatcagtcagaatggcttagatctttatacatttttatatt
agccctctattggatgtagggttagtgacgatcttcaatacttccttgtg
gtgaaacatttatccttctttaaaattttgagatatatacatatatattg
tatgtgcacatgttatattttattaaatgtaattttattataataaagtt
catgtttctccataatttttagttatgcatttttatgtatcacccttagt
gttctgtgtagtaaaccatgtgtgtttgtttctcctgtctataataaact
acaaaaccaacagctaacatctgtgttttcttcaataaactcctccactt
ataataaccactattctattcagtgtcctgcattaacttgtcttttatta
ataccaaacattgacttttacttcctggctgatttagtctagcacaatct
ccatcaaattgatctcttgtcccaaataacctaattcctcttgcttcaag
gctgactattatgcatgcatgctttcttaaaaattatctgtgataaatat
gtaagtatgatatgtatcttagctgttggatatttctagagactttaatt
ttctctagattggtcaattttgaagtagaagtatgtaaagtattttaatt
atttatagtgctctacaagttatagtattttgctcttccctttgattcca
tttgtattttttctcttccttttctcagtatcctctaggcttgttgattt
ttttttcatcctttcaagttagcaactcttaacttattatctttttactc
tatttctaattctggtttcatcttttcttagtcttgttaatatttctttt
attttctttacttatgttcagttagttctatttaaggtttttttttactg
a

tcacctgaggaataccgaacggctgagaagcacctgaaaaaatgttcaac
atccttaatcatcagggaaattcaaatcaaaacaaccctgagattccacc
tcacaccagtcagaatggctaagatcaaaaattcaggtgacagcagatgc
tggcgaggatgtggagaaagagcaaccctcctccattgtttgtgggattg
caagcttgtacagccactctggaaatcagtctggtggttcctcagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_63193394_63194398
seq2: B6Ng01-173A13.b_48_1048

seq1  GAATTCTCAACTGAGTAATACTGAATGACTGAGAACCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAACTGAGTAATACTGAATGACTGAGAACCACCTGAAAAAATG  50

seq1  TTCAACATCCTTAATCATCAGGGAAATGCATATCAAAACAACCTTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAATCATCAGGGAAATGCATATCAAAACAACCTTGAGAT  100

seq1  TCCACCTCATATCAGTCAGAATGGCTTAGATCTTTATACATTTTTATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCATATCAGTCAGAATGGCTTAGATCTTTATACATTTTTATATT  150

seq1  AGCCCTCTATTGGATGTAGGGTTAGTGACGATCTTCAATACTTCCTTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCTATTGGATGTAGGGTTAGTGACGATCTTCAATACTTCCTTGTG  200

seq1  GTGAAACATTTATCCTTCTTTAAAATTTTGAGATATATACATATATATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAACATTTATCCTTCTTTAAAATTTTGAGATATATACATATATATTG  250

seq1  TATGTGCACATGTTATATTTTATTAAATGTAATTTTATTATAATAAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGCACATGTTATATTTTATTAAATGTAATTTTATTATAATAAAGTT  300

seq1  CATGTTTCTCCATAATTTTTAGTTATGCATTTTTATGTATCACCCTTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTCTCCATAATTTTTAGTTATGCATTTTTATGTATCACCCTTAGT  350

seq1  GTTCTGTGTAGTAAACCATGTGTGTTTGTTTCTCCTGTCTATAATAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTGTAGTAAACCATGTGTGTTTGTTTCTCCTGTCTATAATAAACT  400

seq1  ACAAAACCAACAGCTAACATCTGTGTTTTCTTCAATAAACTCCTCCACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACCAACAGCTAACATCTGTGTTTTCTTCAATAAACTCCTCCACTT  450

seq1  ATAATAACCACTATTCTATTCAGTGTCCTGCATTAACTTGTCTTTTATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAACCACTATTCTATTCAGTGTCCTGCATTAACTTGTCTTTTATTA  500

seq1  ATACCAAACATTGACTTTTACTTCCTGGCTGATTTAGTCTAGCACAATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAAACATTGACTTTTACTTCCTGGCTGATTTAGTCTAGCACAATCT  550

seq1  CCATCAAATTGATCTCTTGTCCCAAATAACCTAATTCCTCTTGCTTCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAAATTGATCTCTTGTCCCAAATAACCTAATTCCTCTTGCTTCAAG  600

seq1  GCTGACTATTATGCATGCATGCTTTCTTAAAAATTATCTGTGATAAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTATTATGCATGCATGCTTTCTTAAAAATTATCTGTGATAAATAT  650

seq1  GTAAGTATGATATGTATCTTAGCTGTTGGATATTTCTAGAGACTTTAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTATGATATGTATCTTAGCTGTTGGATATTTCTAGAGACTTTAATT  700

seq1  TTCTCTAGATTGGTCAATTTTGAAGTAGAAGTATGTAAAGTATTTTAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAGATTGGTCAATTTTGAAGTAGAAGTATGTAAAGTATTTTAATT  750

seq1  ATTTATAGTGCTCTACAAGTTATAGTA-TTTGCTCTTCCCTTTGATTCCA  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATTTATAGTGCTCTACAAGTTATAGTATTTTGCTCTTCCCTTTGATTCCA  800

seq1  TTTGTATTTTTTCTCTTCCTTTTCTCAGTATCCTCTAGGCTTGTTGATTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTTTTTCTCTTCCTTTTCTCAGTATCCTCTAGGCTTGTTGATTT  850

seq1  TTTTTTCATCCTTTCAAGTTAGCAACTCTTAACTTTATTTATCTTTTTAC  899
      |||||||||||||||||||||||||||||||||||   ||||||||||||
seq2  TTTTTTCATCCTTTCAAGTTAGCAACTCTTAACTT--ATTATCTTTTTAC  898

seq1  TCTATTTCTAATTCTGGTTTCATCTTTTCTTAGTCTTGTTAATAATTTCT  949
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCTATTTCTAATTCTGGTTTCATCTTTTCTTAGTCTTGTTAAT-ATTTCT  947

seq1  TTTATTTTCTTTACTTATGTTCAGTTAGTTCTTATTTTAGGTTTTTTTTT  999
      ||||||||||||||||||||||||||||||| ||||| ||||||||||||
seq2  TTTATTTTCTTTACTTATGTTCAGTTAGTTC-TATTTAAGGTTTTTTTTT  996

seq1  AGCTGA  1005
      | ||||
seq2  A-CTGA  1001


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