BAC Information

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BAC

Clone NameB6Ng01-173L07
Chromosome12 (Build37)
Map Location 84,015,490 - 84,134,691
singlet/doubletdoublet
Overlap geneRgs6
Upstream genePcnx, Sipa1l1, LOC432675, EG666911
Downstream geneDpf3, Wdr21, Zfyve1, LOC626950, Rbm25, Psen1, Papln
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173L07.bB6Ng01-173L07.g
ACCGA001981GA001982
length1,077894
definitionB6Ng01-173L07.b B6Ng01-173L07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,133,617 - 84,134,691)(84,015,490 - 84,016,382)
sequence
gaattctcaatttggaaaccttccacctcctggaagggtccccagcatcc
atcaatccaccttctgtggctgaggctgtggccgtgatggagaggaacag
aagtgagaaaaacaacagaagcatctgccaggccctctcagctcacccct
gccatctctgtccttctttccttgctcctgtcttggtggaggcgaaaatc
catgcctccctcccttggcagcatctgacagctcagcatcatgaccaaag
ctgaacagacagtcaaagatttctgtgttctcttctgaatttgctctctg
gcatttctgtggttaaatcacagcaggctccctgaagcaccttggcaact
gcggtgatgacccatggcgactcactgcacggtggacactgcttctgagt
gggcgtgttcatttaggcagagaggcgagcataacctctagatttcattg
tactgctgagactcatagtatagaaccctcagagccaggcatctttctgg
ccaatcctctgttcacactgataactctagatccagagacaaatgccttt
ggttcagagacccaggaggaataatctcggatggggtggctcaggaacta
gggcaaaggatggagcaaatgtaaaaatcatctcaggtctgtccctcctg
ccccatttcctcagcaccatgcatgccccaggtgctggttaccggatcag
attgctgcagtgaataattaaagaaattgctaaagctaataaaggacata
ccccaggatcctaataatgagtagggacgaggtgggaaggggaggcctag
cgaggacagttgctgtggttgcagagttgactggctgccataaaaacaac
caacacagtgtggtcaagcctgctgatcacccttccacggttgtctctcc
gcgactgcgattgggggtgtcttaaggagaaacagccctgacacctcctg
ttacccctctacttgagtcatattactttctatcaacatctataactcat
gatgactgggtagaggacattagccaaatttacatcccacactttcgggt
ttgctgggatactggctggctttttta
gttccataactctaggataaaatgcttcaaagctaacatgtctgccccgt
ctgtctgtgagccagtacagagcggctcagggttagttagctctcccaaa
ggagaagcgcagccatccacaccttccttagaattaccttcagttacagt
ggttgctcacaatagtgattaagatattttagctgagagcacatccatga
agcacaatagccatgattcagaaagttggtaaggatctgactgcgttagc
acaaagtggtacaacatcatgatgcaatgtctttatttgattttatagag
gaaacctccacaggatgtttagagaggtgtgataacttgttcaagacctc
tattctggaccttggttacatttcagtccagttttggcggtggtggtaat
ctttttcattgcctgtttgtttgtttgtttgactgattgattgatttttt
tttttaaagataggccatgtatcccagatcccctgtatctgatcttgagc
tcactatgtgagccaagctagtctcatgtgcttgcttctgcctcctgagg
gctctgattaaaggtaggcttctttcttcaggcttcctgttaggtgtaag
tgttgacagcccacacggctcagttggacaagtgtggtcagtggtgatat
tattcccaaatattttatttgtcctgagagtactacatactctgaggaga
tcagggacttacagtgactgcctgtgaaagggcattctccctcagtcgtg
tcctctttcttgctcagaaaggcttcgcatccctctgcggcaagactcct
gacagaactactgcaaatgaagatgtctggaattttgggtcatgaattga
gaggattgaggtctagatgtacttgggtagaatgtcagaatgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_84133617_84134691
seq2: B6Ng01-173L07.b_31_1107 (reverse)

seq1  TAAAGAAAGCCAG-CAGT-TACCAGCAACACCG-AAGTGTGGGATGTTAA  47
      |||| |||||||| |||| | |||||||  ||| ||||||||||||| ||
seq2  TAAA-AAAGCCAGCCAGTATCCCAGCAAACCCGAAAGTGTGGGATGTAAA  49

seq1  TTTGGGCTAATGTCCTCTACCCAGTCATCATGAGTTATAGATG-TGATAG  96
      ||| ||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTT-GGCTAATGTCCTCTACCCAGTCATCATGAGTTATAGATGTTGATAG  98

seq1  AAAGTAATATGACCTCAGTAGAGGGGTGACAGGAGGTGTCAGGGCTGTCT  146
      |||||||||||||   ||||||||||| |||||||||||||||||||| |
seq2  AAAGTAATATGACTCAAGTAGAGGGGTAACAGGAGGTGTCAGGGCTGTTT  148

seq1  CTCCTTAAAGACA-CCCCAATCGCAGTCGCGGAGAGACAACCGTGGAAGG  195
      |||||| |||||| ||||||||||||||||||||||||||||||||||||
seq2  CTCCTT-AAGACACCCCCAATCGCAGTCGCGGAGAGACAACCGTGGAAGG  197

seq1  GTGATCAGCAGGCTTGACCACACTGTGTTGGTTGTTTTTATGGCAGCCAG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCAGCAGGCTTGACCACACTGTGTTGGTTGTTTTTATGGCAGCCAG  247

seq1  TCAACTCTGCAACCACAGCAACTGTCCTCGCTAGGCCTCCCCTTCCCACC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTCTGCAACCACAGCAACTGTCCTCGCTAGGCCTCCCCTTCCCACC  297

seq1  TCGTCCCTACTCATTATTAGGATCCTGGGGTATGTCCTTTATTAGCTTTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCCCTACTCATTATTAGGATCCTGGGGTATGTCCTTTATTAGCTTTA  347

seq1  GCAATTTCTTTAATTATTCACTGCAGCAATCTGATCCGGTAACCAGCACC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTCTTTAATTATTCACTGCAGCAATCTGATCCGGTAACCAGCACC  397

seq1  TGGGGCATGCATGGTGCTGAGGAAATGGGGCAGGAGGGACAGACCTGAGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCATGCATGGTGCTGAGGAAATGGGGCAGGAGGGACAGACCTGAGA  447

seq1  TGATTTTTACATTTGCTCCATCCTTTGCCCTAGTTCCTGAGCCACCCCAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTACATTTGCTCCATCCTTTGCCCTAGTTCCTGAGCCACCCCAT  497

seq1  CCGAGATTATTCCTCCTGGGTCTCTGAACCAAAGGCATTTGTCTCTGGAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGATTATTCCTCCTGGGTCTCTGAACCAAAGGCATTTGTCTCTGGAT  547

seq1  CTAGAGTTATCAGTGTGAACAGAGGATTGGCCAGAAAGATGCCTGGCTCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTTATCAGTGTGAACAGAGGATTGGCCAGAAAGATGCCTGGCTCT  597

seq1  GAGGGTTCTATACTATGAGTCTCAGCAGTACAATGAAATCTAGAGGTTAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTTCTATACTATGAGTCTCAGCAGTACAATGAAATCTAGAGGTTAT  647

seq1  GCTCGCCTCTCTGCCTAAATGAACACGCCCACTCAGAAGCAGTGTCCACC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGCCTCTCTGCCTAAATGAACACGCCCACTCAGAAGCAGTGTCCACC  697

seq1  GTGCAGTGAGTCGCCATGGGTCATCACCGCAGTTGCCAAGGTGCTTCAGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTGAGTCGCCATGGGTCATCACCGCAGTTGCCAAGGTGCTTCAGG  747

seq1  GAGCCTGCTGTGATTTAACCACAGAAATGCCAGAGAGCAAATTCAGAAGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGCTGTGATTTAACCACAGAAATGCCAGAGAGCAAATTCAGAAGA  797

seq1  GAACACAGAAATCTTTGACTGTCTGTTCAGCTTTGGTCATGATGCTGAGC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACAGAAATCTTTGACTGTCTGTTCAGCTTTGGTCATGATGCTGAGC  847

seq1  TGTCAGATGCTGCCAAGGGAGGGAGGCATGGATTTTCGCCTCCACCAAGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGATGCTGCCAAGGGAGGGAGGCATGGATTTTCGCCTCCACCAAGA  897

seq1  CAGGAGCAAGGAAAGAAGGACAGAGATGGCAGGGGTGAGCTGAGAGGGCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCAAGGAAAGAAGGACAGAGATGGCAGGGGTGAGCTGAGAGGGCC  947

seq1  TGGCAGATGCTTCTGTTGTTTTTCTCACTTCTGTTCCTCTCCATCACGGC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGATGCTTCTGTTGTTTTTCTCACTTCTGTTCCTCTCCATCACGGC  997

seq1  CACAGCCTCAGCCACAGAAGGTGGATTGATGGATGCTGGGGACCCTTCCA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCTCAGCCACAGAAGGTGGATTGATGGATGCTGGGGACCCTTCCA  1047

seq1  GGAGGTGGAAGGTTTCCAAATTGAGAATTC  1075
      ||||||||||||||||||||||||||||||
seq2  GGAGGTGGAAGGTTTCCAAATTGAGAATTC  1077

seq1: chr12_84015490_84016382
seq2: B6Ng01-173L07.g_72_964

seq1  TTCCATAACTCTAGGATAAAATGCTTCAAAGCTAACATGTCTGCCCCGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATAACTCTAGGATAAAATGCTTCAAAGCTAACATGTCTGCCCCGTC  50

seq1  TGTCTGTGAGCCAGTACAGAGCGGTTCAGGGTTAGTTAGCTCTCCCAAAG  100
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGTCTGTGAGCCAGTACAGAGCGGCTCAGGGTTAGTTAGCTCTCCCAAAG  100

seq1  GAGAAGCGCAGCCATCCACACCTTCCTTAGAATTACCTTCAGTTACAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCGCAGCCATCCACACCTTCCTTAGAATTACCTTCAGTTACAGTG  150

seq1  GTTGCTCACAATAGTGATTAAGATATTTTAGCTGAGAGCACATCCATGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTCACAATAGTGATTAAGATATTTTAGCTGAGAGCACATCCATGAA  200

seq1  GCACAATAGCCATGATTCAGAAAGTTGGTAAGGATCTGACTGCGTTAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAATAGCCATGATTCAGAAAGTTGGTAAGGATCTGACTGCGTTAGCA  250

seq1  CAAAGTGGTACAACATCATGATGCAATGTCTTTATTTGATTTTATAGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTGGTACAACATCATGATGCAATGTCTTTATTTGATTTTATAGAGG  300

seq1  AAACCTCCACAGGATGTTTAGAGAGGTGTGATAACTTGTTCAAGACCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCCACAGGATGTTTAGAGAGGTGTGATAACTTGTTCAAGACCTCT  350

seq1  ATTCTGGACCTTGGTTACATTTCAGTCCAGTTTTGGCGGTGGTGGTAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGACCTTGGTTACATTTCAGTCCAGTTTTGGCGGTGGTGGTAATC  400

seq1  TTTTTCATTGTCTGTTTGTTTGTTTGTTTGACTGATTGATTGATTTTTTT  450
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATTGCCTGTTTGTTTGTTTGTTTGACTGATTGATTGATTTTTTT  450

seq1  TTTTAAAGATAGGCCATGTATCCCAGATCCCCTGTATCTGATCTTGAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGATAGGCCATGTATCCCAGATCCCCTGTATCTGATCTTGAGCT  500

seq1  CACTATGTGAGCCAAGCTAGTCTCATGTGCTTGCTTCTGCCTCCTGAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGTGAGCCAAGCTAGTCTCATGTGCTTGCTTCTGCCTCCTGAGGG  550

seq1  CTCTGATTAAAGGTAGGCTTCTTTCTTCAGGCTTCCTGTTAGGTGTAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATTAAAGGTAGGCTTCTTTCTTCAGGCTTCCTGTTAGGTGTAAGT  600

seq1  GTTGTCAGCCCACACGGCTCAGTAGGACAAGTGTGGTCAGTGGTGATATT  650
      |||| |||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTTGACAGCCCACACGGCTCAGTTGGACAAGTGTGGTCAGTGGTGATATT  650

seq1  ATTCCCAAATATTTTATTTGTCCTGAGAGTACTACATACTCTGAGGAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAAATATTTTATTTGTCCTGAGAGTACTACATACTCTGAGGAGAT  700

seq1  CGGGGACTTACAGTGACTGCCTGTGAAAGGGCATTCTCCCTCAGTCGTGT  750
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACTTACAGTGACTGCCTGTGAAAGGGCATTCTCCCTCAGTCGTGT  750

seq1  CCTCTTTCTTGCATCAGAGAGGCTT-GCATCCCTCTGTGGCAAGACACCT  799
      |||||||||||| ||||| |||||| ||||||||||| |||||||| |||
seq2  CCTCTTTCTTGC-TCAGAAAGGCTTCGCATCCCTCTGCGGCAAGACTCCT  799

seq1  GACAGAACTACTGCAAAGGAAGATGTCT-GTATTTTGGGTCATGAATTGA  848
      ||||||||||||||||| |||||||||| | |||||||||||||||||||
seq2  GACAGAACTACTGCAAATGAAGATGTCTGGAATTTTGGGTCATGAATTGA  849

seq1  GAGGGTTGAGGTCATAGTTGTACTTGGGTAGAATGTCAGAATGTC  893
      |||| |||||||| ||| |||||||||||||||||||||||||||
seq2  GAGGATTGAGGTC-TAGATGTACTTGGGTAGAATGTCAGAATGTC  893