BAC Information

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BAC

Clone NameB6Ng01-174N18
Chromosome12 (Build37)
Map Location 31,944,537 - 32,110,017
singlet/doubletdoublet
Overlap geneLOC100043068, Lamb1-1, Dld, LOC668786
Upstream geneSntg2, Tmem18, LOC100043055, Acp1, Sh3yl1, LOC629656, 9030611O19Rik, LOC668781, LOC100043065, LOC100043514, EG629667
Downstream geneSlc26a3, Cbll1, Slc26a4, LOC100043531, Bcap29, Dus4l, LOC100043081, Gpr22, Hbp1, Prkar2b, Pik3cg, 2010109K11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174N18.bB6Ng01-174N18.g
ACCGA002822GA002823
length723736
definitionB6Ng01-174N18.b B6Ng01-174N18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,109,296 - 32,110,017)(31,944,537 - 31,945,269)
sequence
gaattcattccaccaccacccccttttcttctggttcttagagattgtct
tagtcagagtttctattcctgcacaaacatcatgaccaaaaagcaaattg
gggaggaaagggtttatttggcttacacttccatactgctgctcatcacc
aaggaagtcaggactggaactcaagcaggtcaggaagcaggagctgatgc
agaggccatggagggatgttctttactggcttgctttcactggcttgctc
aacctgctttcttatagaacccaagactaccagcccagagatggtaccac
ctacaaggggtctttccctcttgatcactaattgagaaaatgccccacag
ttggatctcatggaggcacttccccagttaaagttcctttcttggtgata
actccagcctgtgtcaagttgacatacaaaaccagccagtacagagattt
ttttctttgtatctctaaggagaacaattttgacagcagagataaacaaa
atctatttatatcccttgggagtcccctgaatacccattgcaagattctg
gctcacagtgcagatgtcagcagcagttagacagttctctttcctttttc
ttttctttctttttttttttttcatgtgtgtgttgtgcatctgggtatgc
atgtttcaacttgtgtgagcacagatgtatgtgtgtgtgctcaggctcat
gggtgcatgtgtaatgtggaggc
cggaattcacacacacacccacaaacacaatctcagtcactgcaaaaatg
tgagcatcacagccatctctgagccactcacgggaaggagggaggtggta
atggctgaccaccattgccaccattggaacatttaggttggaatggagag
tactagtccctcatggcaatccaagggaagttactagaggaatcgactta
atacaaacacaagcacaaacaacagcttctactataaagtctatcgcact
gtgtaccatgaccccctggtgtagtttccctatgacagagggtaacagta
atgtgcctgtgtgtctttaagcagtgaaaacaaaaggctattcaatttta
tttattcatctgacaaatgatattcaatatctataatacactagaaccct
ttccctaatgggaaagcaaagttggacaaagtacagacatagtcttcaaa
gagttatgggggacacgaccatttagtacagaactgtggagtgctgatct
acatagtatacagggggcagagtgcttacttttctgttcctgtgatgaaa
taccatgaccaaggaaaaaggagtttattttggcttagggttccagaggg
ataagagtttgtcacggtggggacctcggcaacgagcagcaggcatggcc
gtaggatcaggaagctgagaaatcacatctttcaaacccaatcaggaagt
agagagggggaactggaagtgggtataatgtgctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_32109296_32110017
seq2: B6Ng01-174N18.b_37_759 (reverse)

seq1  GCCTCCACA-TACACATGCACCCATGAGCCTGAGCACACACACATACATC  49
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCACATTACACATGCACCCATGAGCCTGAGCACACACACATACATC  50

seq1  TGTGCTCACACAAGTTGAAACATGCATACCCAGATGCACAACACACACAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCACACAAGTTGAAACATGCATACCCAGATGCACAACACACACAT  100

seq1  GAAAAAAAAAAAAAGAAAGAAAAGAAAAAGGAAAGAGAACTGTCTAACTG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAAAAAAGAAAGAAAAGAAAAAGGAAAGAGAACTGTCTAACTG  150

seq1  CTGCTGACATCTGCACTGTGAGCCAGAATCTTGCAATGGGTATTCAGGGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGACATCTGCACTGTGAGCCAGAATCTTGCAATGGGTATTCAGGGG  200

seq1  ACTCCCAAGGGATATAAATAGATTTTGTTTATCTCTGCTGTCAAAATTGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCAAGGGATATAAATAGATTTTGTTTATCTCTGCTGTCAAAATTGT  250

seq1  TCTCCTTAGAGATACAAAGAAAAAAATCTCTGTACTGGCTGGTTTTGTAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTAGAGATACAAAGAAAAAAATCTCTGTACTGGCTGGTTTTGTAT  300

seq1  GTCAACTTGACACAGGCTGGAGTTATCACCAAGAAAGGAACTTTAACTGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACTTGACACAGGCTGGAGTTATCACCAAGAAAGGAACTTTAACTGG  350

seq1  GGAAGTGCCTCCATGAGATCCAACTGTGGGGCATTTTCTCAATTAGTGAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGCCTCCATGAGATCCAACTGTGGGGCATTTTCTCAATTAGTGAT  400

seq1  CAAGAGGGAAAGACCCCTTGTAGGTGGTACCATCTCTGGGCTGGTAGTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGGAAAGACCCCTTGTAGGTGGTACCATCTCTGGGCTGGTAGTCT  450

seq1  TGGGTTCTATAAGAAAGCAGGTTGAGCAAGCCAGTGAAAGCAAGCCAGTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCTATAAGAAAGCAGGTTGAGCAAGCCAGTGAAAGCAAGCCAGTA  500

seq1  AAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCT  550

seq1  TGAGTTCCAGTCCTGACTTCCTTGGTGATGAGCAGCAGTATGGAAGTGTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCCAGTCCTGACTTCCTTGGTGATGAGCAGCAGTATGGAAGTGTA  600

seq1  AGCCAAATAAACCCTTTCCTCCCCAATTTGCTTCTTGGTCATGATGTTTG  649
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGCCAAATAAACCCTTTCCTCCCCAATTTGCTTTTTGGTCATGATGTTTG  650

seq1  TGCAGGAATAGAAACTCTGACTAAGACAATCTCTAAGAACCAGAAGAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGAATAGAAACTCTGACTAAGACAATCTCTAAGAACCAGAAGAAAA  700

seq1  GGGGGTGGTGGTGGAATGAATTC  722
      |||||||||||||||||||||||
seq2  GGGGGTGGTGGTGGAATGAATTC  723

seq1: chr12_31944537_31945269
seq2: B6Ng01-174N18.g_69_803

seq1  GGAATTCACACACACACACACACACACAATCTCAGTCACTGCAAAAATGT  50
      ||||||||||||||||| |||| |||||||||||||||||||||||||||
seq2  GGAATTCACACACACACCCACAAACACAATCTCAGTCACTGCAAAAATGT  50

seq1  GAGCATCACAGCCATCTCTGAGCCACTCACGGGAAGGAGGGAGGTGGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCACAGCCATCTCTGAGCCACTCACGGGAAGGAGGGAGGTGGTAA  100

seq1  TGGCTGACCACCATTGCCACCATTGGAACATTTAGGTTGGAATGGAGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGACCACCATTGCCACCATTGGAACATTTAGGTTGGAATGGAGAGT  150

seq1  ACTAGTCCCTCATGGCAATCCAAGGGAAGTTACTAGAGGAATCGACTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTCCCTCATGGCAATCCAAGGGAAGTTACTAGAGGAATCGACTTAA  200

seq1  TACAAACACAAGCACAAACAACAGCTTCTACTATAAAGTCTATCGCACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACACAAGCACAAACAACAGCTTCTACTATAAAGTCTATCGCACTG  250

seq1  TGTACCATGACCCCCTGGTGTAGTTTCCCTATGACAGAGGGTAACAGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCATGACCCCCTGGTGTAGTTTCCCTATGACAGAGGGTAACAGTAA  300

seq1  TGTGCCTGTGTGTCTTTAAGCAGTGAAAACAAAAGGCTATTCAATTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTGTGTGTCTTTAAGCAGTGAAAACAAAAGGCTATTCAATTTTAT  350

seq1  TTATTCATCTGACAAATGATATTCAATATCTATAATACACTAGAACCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATCTGACAAATGATATTCAATATCTATAATACACTAGAACCCTT  400

seq1  TCCCTAATGGGAAAGCAAAGTTGGACAAAGTACAGACATAGTCTTCAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAATGGGAAAGCAAAGTTGGACAAAGTACAGACATAGTCTTCAAAG  450

seq1  AGTTATGGGGGACACGACCATTTAGTACAGAACTGTGGAGTGCTGATCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGGGGGACACGACCATTTAGTACAGAACTGTGGAGTGCTGATCTA  500

seq1  CATAGTATACAGGGGGCAGAGTGCTTACTTTTCTGTTCCTGTGATGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTATACAGGGGGCAGAGTGCTTACTTTTCTGTTCCTGTGATGAAAT  550

seq1  ACCATGACCAAGGAAAAAGGAGTTTATTTTGGCTTAGGGTTCCAGAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGACCAAGGAAAAAGGAGTTTATTTTGGCTTAGGGTTCCAGAGGGA  600

seq1  TAAGAGTTTGTCACGGTGGGGACCTCGGCAACGAGCAGCAGGCATGGCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTTTGTCACGGTGGGGACCTCGGCAACGAGCAGCAGGCATGGCCG  650

seq1  TAGGATCAGGAAGCTGAGAAATCACATC-TTCAAACCCAATCAGGAAGTA  699
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAGGATCAGGAAGCTGAGAAATCACATCTTTCAAACCCAATCAGGAAGTA  700

seq1  GAGAGGGGGAACTGGAAGTGGG-ATAATGTGCTTA  733
      |||||||||||||||||||||| ||||||||||||
seq2  GAGAGGGGGAACTGGAAGTGGGTATAATGTGCTTA  735