BAC Information

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BAC

Clone NameB6Ng01-175K07
Chromosome12 (Build37)
Map Location 29,298,094 - 29,299,065
singlet/doubletsinglet
Overlap geneColec11
Upstream geneLOC669327, 1110015M06Rik, Allc
Downstream geneRps7, Rnaseh1, Adi1, Ttc15, Tssc1, 4833405L11Rik, LOC629608, Myt1l, LOC100043496
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175K07.bB6Ng01-175K07.g
ACCGA003395GA003396
length1,164983
definitionB6Ng01-175K07.b B6Ng01-175K07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcgattcctta
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaaccggtaagaaggacacatgctccactat
cttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtaccactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgtgaa
caaatcacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagatattatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctcccaa
tggaggagctagagaaagtagccaggagctaaagggatctgcaaccctat
agtggacacattatgactacagtaccccggagctctgactctagctgcat
atgtattcaaagaatggctactcgcatcactgaagagagccattggacag
caatttatatgcccagtacaggggaacgccaaggccaaaagggggattgg
ggtggtttagggta
gaattcctatgagatgggcttgggcatttatgagggtttttttttttctt
ttggttttgttttgttttgttttggttttggtttttcttttctttgacct
caatttgataacttcaaaacaaaaccatctaggctttgcagatgactgtt
tcttagcgaggagaactcctcacgctaatgttttgtctcatgggaagtga
gtgagccccttcttctggccactgttttctagctgtgagggtgaatttca
atcagagggtcccagtgggcttgctgtcatgctcattgccgtacatggcc
atgtctcctgtctctctctctttttctcctcctcctctttcgtctcctct
ccctcctcctcttcctcttcctcctcctcttcattctcttcttccccccc
tcctccccctcctccaccaccatattctcctcctcctcttcttccttttt
cttccttttgtgacagtgttttactctgtagccttccttggctagcctag
gattcactatatagacaaggatgtgtagatcaagaagcagagacaaatag
atctctgtgagtttgaggccagtcctttggtgactttctgtcttttagga
aggaaaaagaagaatcaaactcgtgttgtaggaaggtcatttggtaaggg
ttagagaataggtatggtcctccgattccctgtgacccagctccttcacc
cccatagactcaccttgtcagatatgctgactgcttatttataccttttg
tctcttgtacctggccattgaacccccaaacatgaagggcatactttatt
gatctcaggaagtccacatggaaggccagcatgagtgctccatgtgtcat
gcttgagatgaccaggagacaccctggtttgtttctccctagcattgttc
accagactacatgatgtttccctgggggccacctgaatacatccctccct
ccactaatcccttatgggcttgaatgctgtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_29298094_29299065
seq2: B6Ng01-175K07.g_63_1045 (reverse)

seq1  TCCACAGCACTCCAG-CCATAA-GGATAAGTG--AGGAGGAATGTA-TCA  45
      ||||||||| || || |||||| |||| ||||   ||||| ||||| |||
seq2  TCCACAGCATTCAAGCCCATAAGGGATTAGTGGAGGGAGGGATGTATTCA  50

seq1  GGTGGCCCCCAGGGAAACATCATGTAGTCTGGTGA--CATGCT-GGGAG-  91
      |||||||||||||||||||||||||||||||||||   ||||| ||||| 
seq2  GGTGGCCCCCAGGGAAACATCATGTAGTCTGGTGAACAATGCTAGGGAGA  100

seq1  AACAAACCAGGGTGTCTCCTGGTCCTCTC-AGCATGACACATGGAGCACT  140
      |||||||||||||||||||||||| |||| ||||||||||||||||||||
seq2  AACAAACCAGGGTGTCTCCTGGTCATCTCAAGCATGACACATGGAGCACT  150

seq1  CATGCTGGCCTTCCATGTGGACTTCCTGAGATCAATAAAGTATGCCCTTC  190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGGCCTTCCATGTGGACTTCCTGAGATCAATAAAGTATGCCCTTC  200

seq1  ATGTTTGGGGGTTCAATGGCCAGGTACAAGAGAC-AAAGGTATAAATAAG  239
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATGTTTGGGGGTTCAATGGCCAGGTACAAGAGACAAAAGGTATAAATAAG  250

seq1  CAGTCAGCATATCTGACAAGGTGAGTCTATGGGGGTGAAGGAGCTGGGTC  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGCATATCTGACAAGGTGAGTCTATGGGGGTGAAGGAGCTGGGTC  300

seq1  ACAGGGAATCGGAGGACCATACCTATTCTCTAACCCTTACCAAATGACCT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGAATCGGAGGACCATACCTATTCTCTAACCCTTACCAAATGACCT  350

seq1  TCCTACAACACGAGTTTGATTCTTCTTTTTCCTTCCTAAAAGACAGAAAG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACAACACGAGTTTGATTCTTCTTTTTCCTTCCTAAAAGACAGAAAG  400

seq1  TCACCAAAGGACTGGCCTCAAACTCACAGAGATCTATTTGTCTCTGCTTC  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAAAGGACTGGCCTCAAACTCACAGAGATCTATTTGTCTCTGCTTC  450

seq1  TTGATCTACACATCCTTGTCTATATAGTGAATCCTAGGCTAGCCAAGGAA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTACACATCCTTGTCTATATAGTGAATCCTAGGCTAGCCAAGGAA  500

seq1  GGCTACAGAGTAAAACACTGTCACAAAAGGAAGAAAAAGGAAGAAGAGGA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACAGAGTAAAACACTGTCACAAAAGGAAGAAAAAGGAAGAAGAGGA  550

seq1  GGAGGAGAATATGGTGGTGGAGGAGGGGGAGGAGGGGGGGAAGAAGAGAA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGAATATGGTGGTGGAGGAGGGGGAGGAGGGGGGGAAGAAGAGAA  600

seq1  TGAAGAGGAGGAGGAAGAGGAAGAGGAGGAGGGAGAGGAGACGAAAGAGG  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGGAGGAGGAAGAGGAAGAGGAGGAGGGAGAGGAGACGAAAGAGG  650

seq1  AGGAGGAGAAAAAGAGAGAGAGACAGGAGACATGGCCATGTACGGCAATG  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAGAAAAAGAGAGAGAGACAGGAGACATGGCCATGTACGGCAATG  700

seq1  AGCATGACAGCAAGCCCACTGGGACCCTCTGATTGAAATTCACCCTCACA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGACAGCAAGCCCACTGGGACCCTCTGATTGAAATTCACCCTCACA  750

seq1  GCTAGAAAACAGTGGCCAGAAGAAGGGGCTCACTCACTTCCCATGAGACA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAAAACAGTGGCCAGAAGAAGGGGCTCACTCACTTCCCATGAGACA  800

seq1  AAACATTAGCGTGAGGAGTTCTCCTCGCTAAGAAACAGTCATCTGCAAAG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTAGCGTGAGGAGTTCTCCTCGCTAAGAAACAGTCATCTGCAAAG  850

seq1  CCTAGATGGTTTTGTTTTGAAGTTATCAAATTGAGGTCAAAGAAAAGAAA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATGGTTTTGTTTTGAAGTTATCAAATTGAGGTCAAAGAAAAGAAA  900

seq1  AACCAAAACCAAAACAAAACAAAACAAAACCAAAAGAAAAAAAAAAACCC  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAACCAAAACAAAACAAAACAAAACCAAAAGAAAAAAAAAAACCC  950

seq1  TCATAAATGCCCAAGCCCATCTCATAGGAATTC  972
      |||||||||||||||||||||||||||||||||
seq2  TCATAAATGCCCAAGCCCATCTCATAGGAATTC  983