BAC Information

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BAC

Clone NameB6Ng01-175L11
Chromosome12 (Build37)
Map Location 64,362,070 - 64,363,218
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC622746, LOC100040438, 1700047L15Rik, Tspyl-ps, EG665741, EG382606
Downstream geneLOC435302
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175L11.bB6Ng01-175L11.g
ACCGA003447GA003448
length1,1411,164
definitionB6Ng01-175L11.b B6Ng01-175L11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaccatctatcattgaattaatggatctctttaacgagaatctt
aagcaactgatatgtcaaaaagagatgcagatttgtaccttttcttcaaa
gacagctacaataatacctttctgtgacagcagcatatagaaaagctccc
ttacacagtaagtggatttacaaatatgctaacttgaagattctaactca
aagaagttagtctggataatccatacagagttttgaaaccctttaatact
gaaaggcacaaaaaacctttcctttctgtagtcagagggaaattacagaa
tgcagcaaggtggaagttgtaaccttaaaaccaggtgaggaatgagagaa
acttcatgaaaaagggaaaaagatgaaaacaccagtcctttgggttgtgg
tttgaataaaaatagtgcccgtgggctcattttgtcaccagagagtggaa
ccctaataggattaggattaggaagtgtgactttgttgaaggaagtgtgt
cactgggcatggactttaaggatcccaaagcccatgtgagctgcacctct
ctatctctctcattctctctgtctcccattctctctgtctctcattctct
ctgtctctcattctctgtctctgtctgtctgtgtctctgtctctgtttcc
tctctctctctttctctctcactcacactctctattttttatcctgatgc
agctcacaactactttcgtagcagtatggttgccatgcctgctgctgtgc
attctgtggtgatgataatggaccaaatctctgtaactgtaagcaagttt
tcaattacatgctgtcttttataagagttgccttggtgatggtgtctctt
caggctcttcacagcaatagaacaataataagacatactttttagttcac
catagtcctagggacaaacttattttaacctttaaactcagttagatttc
tgactttcaaaattaatattctaaagcaataaataattagttttagccac
taactttatttcagcacacagatatatcatatgtttaaataataacaaca
ttttactaagcttctgaatgtaactgcttgcttagatgatatgctctgct
acgtttagttattcagaaataaagcaagtagtctaatttat
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccaccttacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaaaaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcttaaa
ggaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcaccagtcagctaatggatggatcatagggctccc
aatggaggagctagagaaagtagcccaaggagcttaaagggaatctgcta
cccctaatagggtggaacaacattattgagctaaccagttaccccgagct
cttgaactctagctgcatatatatcaaaagatggctagtcgcatcactga
gaaaggagaaggtccatgaactgcaactttatatagccccagtcaacagg
ggtatttcccacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_64362070_64363218
seq2: B6Ng01-175L11.b_44_1184 (reverse)

seq1  ATAAAT--GACTACTTGGTTTA--TCTGAATAACTAAACGTAAGCAAGGA  46
      ||||||  ||||||||| ||||  ||||||||||||||||| ||||  ||
seq2  ATAAATTAGACTACTTGCTTTATTTCTGAATAACTAAACGT-AGCA--GA  47

seq1  GGCATATCATCTAAAGCAGGCAGTTACATTCAGAAGCTTAGTAAAATGTT  96
       ||||||||||| ||||| |||||||||||||||||||||||||||||||
seq2  -GCATATCATCT-AAGCAAGCAGTTACATTCAGAAGCTTAGTAAAATGTT  95

seq1  GTTATTATTTAAACAATATGATTATATTCTGTTGTTGCTGAAATAAAGTT  146
      |||||||||||||| |||||| |||| |||||   |||||||||||||||
seq2  GTTATTATTTAAAC-ATATGA-TATA-TCTGT--GTGCTGAAATAAAGTT  140

seq1  AGTGGCTAAAACTAAATTATTTTATTGCTTTAGAATATTAATTTTGAAAG  196
      ||||||||||||| ||||| ||||||||||||||||||||||||||||||
seq2  AGTGGCTAAAACT-AATTA-TTTATTGCTTTAGAATATTAATTTTGAAAG  188

seq1  TCAGAAATCTAACTGAGTTT-AAGGTTAAAATAAGTTTGTCCCTAGGACT  245
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCAGAAATCTAACTGAGTTTAAAGGTTAAAATAAGTTTGTCCCTAGGACT  238

seq1  ATGGTGAACTAAAAAGTATGTCTTATTTATTGTTCTATTGCTGTGAAGAG  295
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATGGTGAACTAAAAAGTATGTCTTA-TTATTGTTCTATTGCTGTGAAGAG  287

seq1  CCTGAAGAGACACCATCACCAAGGCAACTCTTATAAAAGACAGCATGTAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGAGACACCATCACCAAGGCAACTCTTATAAAAGACAGCATGTAA  337

seq1  TTGAAAACTTGCTTACAGTTACAGAGATTTGGTCCATTATCATCACCACA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAACTTGCTTACAGTTACAGAGATTTGGTCCATTATCATCACCACA  387

seq1  GAATGCACAGCAGCAGGCATGGCAACCATACTGCTACGAAAGTAGTTGTG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCACAGCAGCAGGCATGGCAACCATACTGCTACGAAAGTAGTTGTG  437

seq1  AGCTGCATCAGGATAAAAAATAGAGAGTGTGAGTGAGAGAGAAAGAGAGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCATCAGGATAAAAAATAGAGAGTGTGAGTGAGAGAGAAAGAGAGA  487

seq1  GAGAGGAAACAGAGACAGAGACACAGACAGACAGAGACAGAGAATGAGAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAAACAGAGACAGAGACACAGACAGACAGAGACAGAGAATGAGAG  537

seq1  ACAGAGAGAATGAGAGACAGAGAGAATGGGAGACAGAGAGAATGAGAGAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGAATGAGAGACAGAGAGAATGGGAGACAGAGAGAATGAGAGAG  587

seq1  ATAGAGAGGTGCAGCTCACATGGGCTTTGGGATCCTTAAAGTCCATGCCC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAGGTGCAGCTCACATGGGCTTTGGGATCCTTAAAGTCCATGCCC  637

seq1  AGTGACACACTTCCTTCAACAAAGTCACACTTCCTAATCCTAATCCTATT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACACACTTCCTTCAACAAAGTCACACTTCCTAATCCTAATCCTATT  687

seq1  AGGGTTCCACTCTCTGGTGACAAAATGAGCCCACGGGCACTATTTTTATT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTCCACTCTCTGGTGACAAAATGAGCCCACGGGCACTATTTTTATT  737

seq1  CAAACCACAACCCAAAGGACTGGTGTTTTCATCTTTTTCCCTTTTTCATG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCACAACCCAAAGGACTGGTGTTTTCATCTTTTTCCCTTTTTCATG  787

seq1  AAGTTTCTCTCATTCCTCACCTGGTTTTAAGGTTACAACTTCCACCTTGC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCTCTCATTCCTCACCTGGTTTTAAGGTTACAACTTCCACCTTGC  837

seq1  TGCATTCTGTAATTTCCCTCTGACTACAGAAAGGAAAGGTTTTTTGTGCC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCTGTAATTTCCCTCTGACTACAGAAAGGAAAGGTTTTTTGTGCC  887

seq1  TTTCAGTATTAAAGGGTTTCAAAACTCTGTATGGATTATCCAGACTAACT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTATTAAAGGGTTTCAAAACTCTGTATGGATTATCCAGACTAACT  937

seq1  TCTTTGAGTTAGAATCTTCAAGTTAGCATATTTGTAAATCCACTTACTGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAGTTAGAATCTTCAAGTTAGCATATTTGTAAATCCACTTACTGT  987

seq1  GTAAGGGAGCTTTTCTATATGCTGCTGTCACAGAAAGGTATTATTGTAGC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGGAGCTTTTCTATATGCTGCTGTCACAGAAAGGTATTATTGTAGC  1037

seq1  TGTCTTTGAAGAAAAGGTACAAATCTGCATCTCTTTTTGACATATCAGTT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTGAAGAAAAGGTACAAATCTGCATCTCTTTTTGACATATCAGTT  1087

seq1  GCTTAAGATTCTCGTTAAAGAGATCCATTAATTCAATGATAGATGGTGGA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAGATTCTCGTTAAAGAGATCCATTAATTCAATGATAGATGGTGGA  1137

seq1  ATTC  1149
      ||||
seq2  ATTC  1141