BAC Information

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BAC

Clone NameB6Ng01-176G07
Chromosome12 (Build37)
Map Location 91,905,168 - 92,046,405
singlet/doubletdoublet
Overlap geneDio2
Upstream geneNrxn3, LOC100039498, LOC100039287
Downstream geneLOC100039295, 4930544I03Rik, 4930534B04Rik, 5430427M07Rik, Tshr, Gtf2a1, Ston2, EG666955, LOC100039631, Sel1l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176G07.bB6Ng01-176G07.g
ACCGA003937GA003938
length906991
definitionB6Ng01-176G07.b B6Ng01-176G07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,905,168 - 91,906,072)(92,045,836 - 92,046,405)
sequence
gaattctattactaggaaggaattagggcaaagaacaagagctgactaga
aaagaagagcaacagaacttaacatagcctaagacgtgtttcacagggtt
cttatagttgctcaaagacccgcagatgatctcccataacttcaggctga
catttagttattatatgaaatagtaacaataactgtaaaaatgaatccat
atttatctaattttaggaagcataatttaatggcaacattataagtatcg
acacaaagcattgggtatataattatttatttcaaaatgtcatatgaaat
aatacaaatgagctatagctatccatcaatactgaatcctcttatgtgtg
ccttctatggtttgctaagaattgagaagaccaggtagcaattccacttg
tcttctgtagtttgcattttctagtagtgaaagcaaaattacaggagcat
ttttctttctaccacctaattcaagcttcttctggaaggtgatggttatc
tgattggtgagctctcagcttgcctaactcagtccttccatttcctactc
caaagatgctactctgagaagtaccagtgttaatgcagtattcatattag
aaagccctctgtggcaatacattttttctttttttaattggatattttct
ttatttatattccaaatgttatcccctttcccagttatcctaccttggac
actcctatcccattatccctccctgcttctatgaaggtgttcccccaccc
acccactcccaactccctgccctggcattcccctaaacttggacatgtcc
gacaaggtcatcttctgctacataagcagttggagccatgggtcccttcc
tgtgtactctttggttggtggtttagtctctgggatctcgggggaggggg
ggtagg

gaattcattgttataactgaaaagagactatacacaaggaactagcatca
gttaggtcttcttataggcagcctggtcagttagggacccctgacaagta
ggagaagaagggggaataggaaggatctaggtagtggtggttgttgcctg
atggtgtgtaaatactgaatgctactgaactgtatattaaattggttaaa
tcataacctttatgatatgtccacttacaaaagaatgtaactaaatataa
tgggttgtttacatatatatgatatatacatacatactgaaaaatgctta
tatctaagagcccaaggacatagactgggagaaaatatttgtagaagaca
gctggcaaaggattgttatctaaaatatgtaaagaattttaaaactaaaa
gaataagacaatttacctaattttaaaatgggttaaataccttaatggac
acctccttaaaaaaggtatttagatgttaaataacccatcatataccagc
aaggaaatgcaagctaaaataaggtgctacttcacaataattccaatgtg
caaaaccaaggctaaaccaaaggctcgtgagtgtgttaaagagcagtaac
tgtcattcacggttggtagaaacacaaggcaactagagtcactttgaaag
tcagtttgactgtttcttagaaaactaagtacattcttttgagatgacac
agcagtcacaatatttcataattaactccaaaggtgaacatttgtgtgca
tacacaagcacgctcatgattgcatccacacagcagttttcattcacaag
tagaaagtcacagtcagccaagataagtttaactaacttgatgaattgca
acccaaaataatttaacataatgtaatgttaaagaagtgagctaccaaac
ttaaaacaaaaagagatatcgaaggggctggtaagatgccacagcagtga
agcgcttgctaccacacctgatgtcctgagttcatgcctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_91905168_91906072
seq2: B6Ng01-176G07.b_43_948

seq1  GAATTCTATTACTAGGAAGGAATTAGGGCAAAGAACAAGAGCTGACTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTACTAGGAAGGAATTAGGGCAAAGAACAAGAGCTGACTAGA  50

seq1  AAAGAAGAGCAACAGAACTTAACATAGCCTAAGACGTGTTTCACAGGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGAGCAACAGAACTTAACATAGCCTAAGACGTGTTTCACAGGGTT  100

seq1  CTTATAGTTGCTCAAAGACCCGCAGATGATCTCCCATAACTTCAGGCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGTTGCTCAAAGACCCGCAGATGATCTCCCATAACTTCAGGCTGA  150

seq1  CATTTAGTTATTATATGAAATAGTAACAATAACTGTAAAAATGAATCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGTTATTATATGAAATAGTAACAATAACTGTAAAAATGAATCCAT  200

seq1  ATTTATCTAATTTTAGGAAGCATAATTTAATGGCAACATTATAAGTATCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCTAATTTTAGGAAGCATAATTTAATGGCAACATTATAAGTATCG  250

seq1  ACACAAAGCATTGGGTATATAATTATTTATTTCAAAATGTCATATGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAGCATTGGGTATATAATTATTTATTTCAAAATGTCATATGAAAT  300

seq1  AATACAAATGAGCTATAGCTATCCATCAATACTGAATCCTCTTATGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAATGAGCTATAGCTATCCATCAATACTGAATCCTCTTATGTGTG  350

seq1  CCTTCTATGGTTTGCTAAGAATTGAGAAGACCAGGTAGCAATTCCACTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTATGGTTTGCTAAGAATTGAGAAGACCAGGTAGCAATTCCACTTG  400

seq1  TCTTCTGTAGTTTGCATTTTCTAGTAGTGAAAGCAAAATTACAGGAGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGTAGTTTGCATTTTCTAGTAGTGAAAGCAAAATTACAGGAGCAT  450

seq1  TTTTCTTTCTACCACCTAATTCAAGCTTCTTCTGGAAGGTGATGGTTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCTACCACCTAATTCAAGCTTCTTCTGGAAGGTGATGGTTATC  500

seq1  TGATTGGTGAGCTCTCAGCTTGCCTAACTCAGTCCTTCCATTTCCTACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGGTGAGCTCTCAGCTTGCCTAACTCAGTCCTTCCATTTCCTACTC  550

seq1  CAAAGATGCTACTCTGAGAAGTACCAGTGTTAATGCAGTATTCATATTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATGCTACTCTGAGAAGTACCAGTGTTAATGCAGTATTCATATTAG  600

seq1  AAAGCCCTCTGTGGCAATACATTTTTTCTTTTTTTAATTGGATATTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCTCTGTGGCAATACATTTTTTCTTTTTTTAATTGGATATTTTCT  650

seq1  TTATTTATATTCCAAATGTTATCCCCTTTCCCAGTTATCCTACCTTGGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATATTCCAAATGTTATCCCCTTTCCCAGTTATCCTACCTTGGAC  700

seq1  ACTCCTATCCCATTATCCCTCCCTGCTTCTATGAAGGTGTTCCCCCACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTATCCCATTATCCCTCCCTGCTTCTATGAAGGTGTTCCCCCACCC  750

seq1  ACCCACTCCCAACTCCCTGCCCTGGCATTCCCCTAAACTTGGACATGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTCCCAACTCCCTGCCCTGGCATTCCCCTAAACTTGGACATGTCC  800

seq1  GACAAGGTCATCTTCTGCTACATAAGCAGTTGGAGCCATGGGTCCCTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGTCATCTTCTGCTACATAAGCAGTTGGAGCCATGGGTCCCTTCC  850

seq1  TGTGTACTCTTTGGTTGGTGGTTTAGTCTCTGGGATCTCGGGGGA-GGGG  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGTGTACTCTTTGGTTGGTGGTTTAGTCTCTGGGATCTCGGGGGAGGGGG  900

seq1  GGTAGG  905
      ||||||
seq2  GGTAGG  906


seq1: chr12_92045836_92046405
seq2: B6Ng01-176G07.g_63_632 (reverse)

seq1  TTGGTTTAGCCTTGGTTTTGCACATTGGAATTATTGTGAAGTAGCACCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTAGCCTTGGTTTTGCACATTGGAATTATTGTGAAGTAGCACCTT  50

seq1  ATTTTAGCTTGCATTTCCTTGCTGGTATATGATGGGTTATTTAACATCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGCTTGCATTTCCTTGCTGGTATATGATGGGTTATTTAACATCTA  100

seq1  AATACCTTTTTTAAGGAGGTGTCCATTAAGGTATTTAACCCATTTTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTTTTTTAAGGAGGTGTCCATTAAGGTATTTAACCCATTTTAAAA  150

seq1  TTAGGTAAATTGTCTTATTCTTTTAGTTTTAAAATTCTTTACATATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTAAATTGTCTTATTCTTTTAGTTTTAAAATTCTTTACATATTTTA  200

seq1  GATAACAATCCTTTGCCAGCTGTCTTCTACAAATATTTTCTCCCAGTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACAATCCTTTGCCAGCTGTCTTCTACAAATATTTTCTCCCAGTCTA  250

seq1  TGTCCTTGGGCTCTTAGATATAAGCATTTTTCAGTATGTATGTATATATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTGGGCTCTTAGATATAAGCATTTTTCAGTATGTATGTATATATC  300

seq1  ATATATATGTAAACAACCCATTATATTTAGTTACATTCTTTTGTAAGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATGTAAACAACCCATTATATTTAGTTACATTCTTTTGTAAGTGG  350

seq1  ACATATCATAAAGGTTATGATTTAACCAATTTAATATACAGTTCAGTAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCATAAAGGTTATGATTTAACCAATTTAATATACAGTTCAGTAGC  400

seq1  ATTCAGTATTTACACACCATCAGGCAACAACCACCACTACCTAGATCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTATTTACACACCATCAGGCAACAACCACCACTACCTAGATCCTT  450

seq1  CCTATTCCCCCTTCTTCTCCTACTTGTCAGGGGTCCCTAACTGACCAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCCCCCTTCTTCTCCTACTTGTCAGGGGTCCCTAACTGACCAGGC  500

seq1  TGCCTATAAGAAGACCTAACTGATGCTAGTTCCTTGTGTATAGTCTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATAAGAAGACCTAACTGATGCTAGTTCCTTGTGTATAGTCTCTTT  550

seq1  TCAGTTATAACAATGAATTC  570
      ||||||||||||||||||||
seq2  TCAGTTATAACAATGAATTC  570


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