MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-177H10
Chromosome	12 (Build37)
Map Location	82,783,082 - 82,956,092
singlet/doublet	doublet
Overlap gene	LOC100041821, Map3k9
Upstream gene	3830431G21Rik, Gm1568, 4933426M11Rik, Sfrs5, Slc10a1, Smoc1, Slc8a3, LOC100042143, LOC100042148, EG214321, Hspe1-ps2, Adam4, 1810020G14Rik, Synj2bp, Adam21, Med6, Ttc9
Downstream gene	Pcnx, Sipa1l1, LOC432675, EG666911, Rgs6
Link	Open Mouse BAC browser

Click to get alignment info.

name	3830431G21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217682 MGI:3036228
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, 2 Proteins

name	Gm1568 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380768 MGI:2686414
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933426M11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217684 MGI:2444661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sfrs5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20384 MGI:98287
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Slc10a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20493 MGI:97379
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smoc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64075 MGI:1929878
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc8a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110893 MGI:107976
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042143 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100042148 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042148
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 mRNAs, 1815 ESTs, 24 Proteins pseudo : _no_value

name	EG214321 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214321 MGI:3646380
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hspe1-ps2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93749 MGI:1935162
definition	gene_synonym : Cpn10-rs3 note : heat shock protein 1 (chaperonin 10), pseudogene 2 pseudo : _no_value

name	Adam4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11498 MGI:104731
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1810020G14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66272 MGI:1913522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Synj2bp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24071 MGI:1344347
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adam21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56622 MGI:1861229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Med6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69792 MGI:1917042
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69480 MGI:1916730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041821 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041821
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Map3k9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:338372 MGI:2449952
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pcnx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54604 MGI:1891924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sipa1l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217692 MGI:2443679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC432675 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:432675
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 18 ESTs, 10 Proteins pseudo : _no_value

name	EG666911 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666911 MGI:3648202
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 5 Proteins pseudo : _no_value

name	Rgs6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50779 MGI:1354730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3830431G21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263342 GeneID:217682 MGI:3036228
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, 2 Proteins product : RIKEN cDNA 3830431G21 gene, transcript variant 1 transcript_id : XM_126991.8

name	Gm1568 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56606028 GeneID:380768 MGI:2686414
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 1568, (NCBI) transcript_id : NM_001008423.1

name	4933426M11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31581563 GeneID:217684 MGI:2444661
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933426M11 gene transcript_id : NM_178682.3

name	Sfrs5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119226246 GeneID:20384 MGI:98287
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor, arginine/serine-rich 5 (SRp40, HRS) transcript_id : NM_001079695.1

name	Sfrs5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119226242 GeneID:20384 MGI:98287
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor, arginine/serine-rich 5 (SRp40, HRS) transcript_id : NM_001079694.1

name	Sfrs5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119226244 GeneID:20384 MGI:98287
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor, arginine/serine-rich 5 (SRp40, HRS) transcript_id : NM_009159.2

name	Slc10a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755527 GeneID:20493 MGI:97379
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 10 (sodium/bile acid cotransporter family), member 1 transcript_id : NM_011387.1

name	Smoc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11612484 GeneID:64075 MGI:1929878
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SPARC related modular calcium binding 1 transcript_id : NM_022316.1

name	Slc8a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363097 GeneID:110893 MGI:107976
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 8 (sodium/calcium exchanger), member 3 transcript_id : NM_080440.2

name	LOC100042143 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263343 GeneID:100042143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042143 transcript_id : XM_001477943.1

name	EG214321 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111955130 GeneID:214321 MGI:3646380
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG214321 transcript_id : NM_001038995.2

name	Adam4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27923589 GeneID:11498 MGI:104731
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 4 transcript_id : NM_009620.1

name	1810020G14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803516 GeneID:66272 MGI:1913522
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810020G14 gene transcript_id : NM_025461.3

name	Synj2bp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802342 GeneID:24071 MGI:1344347
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synaptojanin 2 binding protein transcript_id : NM_025292.3

name	Adam21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803337 GeneID:56622 MGI:1861229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 21 transcript_id : NM_020330.4

name	Med6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27754026 GeneID:69792 MGI:1917042
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mediator of RNA polymerase II transcription, subunit 6 homolog (yeast) transcript_id : NM_027213.2

name	Ttc9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380851 GeneID:69480 MGI:1916730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 9 transcript_id : NM_001033149.2

name	Map3k9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130417 GeneID:338372 MGI:2449952
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen-activated protein kinase kinase kinase 9 transcript_id : NM_177395.4

name	Pcnx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93004082 GeneID:54604 MGI:1891924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pecanex homolog (Drosophila) transcript_id : NM_018814.3

name	Sipa1l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27369827 GeneID:217692 MGI:2443679
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal-induced proliferation-associated 1 like 1 transcript_id : NM_172579.1

name	Rgs6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802314 GeneID:50779 MGI:1354730
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulator of G-protein signaling 6 transcript_id : NM_015812.2

name	3830431G21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28521618 GeneID:217682 MGI:3036228
definition	codon_start : 1 product : similar to hCG21972, isoform 1 protein_id : XP_126991.2

name	Gm1568 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56606029 CCDS:CCDS26015.1 GeneID:380768 MGI:2686414
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC380768 protein_id : NP_001008423.1

name	4933426M11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520071 CCDS:CCDS26016.1 GeneID:217684 MGI:2444661
definition	codon_start : 1 product : hypothetical protein LOC217684 protein_id : NP_848797.1

name	Sfrs5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119226243 GeneID:20384 MGI:98287
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0006376 - mRNA splice site selection [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : splicing factor, arginine/serine-rich 5 protein_id : NP_001073162.1

name	Sfrs5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119226247 GeneID:20384 MGI:98287
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0006376 - mRNA splice site selection [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : splicing factor, arginine/serine-rich 5 protein_id : NP_001073163.1

name	Sfrs5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119226245 GeneID:20384 MGI:98287
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0006376 - mRNA splice site selection [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : splicing factor, arginine/serine-rich 5 protein_id : NP_033185.2

name	Slc10a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755528 GeneID:20493 MGI:97379
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008508 - bile acid:sodium symporter activity [Evidence IEA]; GO:0005386 - carrier activity [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0015711 - organic anion transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : bile acid cotransporting polypeptide; sodium-taurocholate cotransporting polypeptide product : solute carrier family 10 (sodium/bile acid cotransporter family), member 1 protein_id : NP_035517.1

name	Smoc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11612485 CCDS:CCDS26017.1 GeneID:64075 MGI:1929878
definition	GO_component : GO:0005604 - basement membrane [Evidence IEA]; GO:0005575 - cellular_component [Evidence ND]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : SPARC-related protein; secreted modular calcium binding protein 1; SPARC related modular calcium binding 1 product : secreted modular calcium-binding protein 1 protein_id : NP_071711.1

name	Slc8a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17978254 GeneID:110893 MGI:107976
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0005432 - calcium:sodium antiporter activity [Evidence IEA]; GO:0005386 - carrier activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0007154 - cell communication [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : solute carrier family 8 (sodium/calcium exchanger), member 3 protein_id : NP_536688.1

name	LOC100042143 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263344 GeneID:100042143
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477993.1

name	EG214321 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111955131 CCDS:CCDS26018.1 GeneID:214321 MGI:3646380
definition	codon_start : 1 product : a disintegrin and metalloprotease domain 4b protein_id : NP_001034084.2

name	Adam4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27923590 CCDS:CCDS26019.1 GeneID:11498 MGI:104731
definition	codon_start : 1 note : a disintegrin and metalloprotease domain (ADAM) 4 product : a disintegrin and metalloprotease domain 4 protein_id : NP_033750.1

name	1810020G14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384872 CCDS:CCDS26020.1 GeneID:66272 MGI:1913522
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66272 protein_id : NP_079737.1

name	Synj2bp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384642 CCDS:CCDS26021.1 GeneID:24071 MGI:1344347
definition	GO_component : GO:0005741 - mitochondrial outer membrane [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007028 - cytoplasm organization and biogenesis [Evidence ISS]; GO:0006605 - protein targeting [Evidence IDA]; GO:0030100 - regulation of endocytosis [Evidence IDA]; GO:0007266 - Rho protein signal transduction [Evidence IDA] codon_start : 1 note : outer membrane protein 25; activin receptor interacting protein 2; activin receptor innteracting protein 2; activin receptor-interacting protein 2a; activin receptor-interacting protein 4 product : synaptojanin 2 binding protein protein_id : NP_079568.1

name	Adam21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9966766 CCDS:CCDS26022.1 GeneID:56622 MGI:1861229
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : a disintegrin and metalloprotease domain (ADAM) 21 product : a disintegrin and metalloprotease domain 21 protein_id : NP_065063.1

name	Med6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754027 CCDS:CCDS26023.1 GeneID:69792 MGI:1917042
definition	GO_component : GO:0000119 - mediator complex [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0003713 - transcription coactivator activity [Evidence ISS] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS] codon_start : 1 product : mediator of RNA polymerase II transcription, subunit 6 homolog protein_id : NP_081489.2

name	Ttc9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701652 CCDS:CCDS26024.1 GeneID:69480 MGI:1916730
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : tetratricopeptide repeat domain 9 protein_id : NP_001028321.1

name	Map3k9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52421792 GeneID:338372 MGI:2449952
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : mitogen-activated protein kinase kinase kinase 9 protein_id : NP_796369.2

name	Pcnx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52632387 CCDS:CCDS26025.1 GeneID:54604 MGI:1891924
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : pecanex 1 product : pecanex homolog protein_id : NP_061284.2

name	Sipa1l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369828 CCDS:CCDS26026.1 GeneID:217692 MGI:2443679
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : signal-induced proliferation-associated 1 like 1 protein_id : NP_766167.1

name	Rgs6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789076 GeneID:50779 MGI:1354730
definition	GO_component : GO:0005834 - heterotrimeric G-protein complex [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence TAS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0009968 - negative regulation of signal transduction [Evidence IEA] codon_start : 1 product : regulator of G-protein signaling 6 protein_id : NP_056627.1

name	LOC100041821 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041821
definition	number : 1 pseudo : _no_value

name	LOC100042148 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263345 GeneID:100042148
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 mRNAs, 1815 ESTs, 24 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_033471.1

name	LOC432675 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263347 GeneID:432675
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 18 ESTs, 10 Proteins product : similar to Transcription initiation factor IIA subunit 1 (General transcription factor IIA1) pseudo : _no_value transcript_id : XR_033565.1

name	EG666911 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94392998 GeneID:666911 MGI:3648202
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 5 Proteins product : predicted gene, EG666911 pseudo : _no_value transcript_id : XR_001940.1

clone name	MSMg01-316N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039G09
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-177H10.b	B6Ng01-177H10.g
ACC	GA004727	GA004728
length	1,046	343
definition	B6Ng01-177H10.b	B6Ng01-177H10.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(82,955,056 - 82,956,092)	(82,783,082 - 82,783,424)
sequence	gaattctaaattagtcctagccccaagtgagtgaaaccaagcagggctga agagtctcactcggggtattgggtcctgcagactcattgcgttttgtttt gatggcaggatttttgtttgctccctcccaataacaaaaatgaaaatttc taaggataagataaaaaggcatggcccatggagatatttttacagccttt taaatggaaaccttaatagtacatgggaatgctcttctcattagttgtgt ttattcatttgggttgaattttgaggtttggctaggggtgttattttccc tgtttgttgctgagatttcaccaatgataatatacataatatcttctaac tgtataccaatagcgtacagttctctatatatgttctagaagagtgatat gcatggaaaatctcaaaatcacagtggagagcaaaacaaaaataaaacgc cctgcccttctggattctccctttctctgcattccatccttaaaactcat tatgggtttgaaccctgtgacaagtacttctcacagtgtagtctacaagc tgcccaaattaagacctttcactaaaaacacagacttctgggcctgagga gttgggtctgtggttaaagatgctgccttcctaggtgacccacgttcagt tcccagcatcttcactgcagtttacaactgtctgtgtctgtaactccgat cccctcagacaccactcatgcgtgtggtacacatatatacatgcaggcag gccatttatacacataaaatgaatataaatcttttctaaaaggctcccag aactctgagttccaatatagctatctataacacattagaaaaagccattc gcatgttaaggtgttcccaaattaagaagaattagttataagaagaccta gtttcgtagtcatgtacaataggtgtggcttttactgtgctaggaatgga acctcaggacctttcccactcaagtgggtgcgttcccctctatgcccaat gagattaaacgatggagattgcccgccctttaccactgataagctt	tttctcattcactgaagcattccagtatctcttggagtagcaaccagagc ttcttgactatgaagtgtctgattacacacagaaagagcaagatagggga ggctagcattgttatttagtacgaaaatgttaagcttccatacaggaaaa taagagtatggtaagtgtttgagccaagtcattttggcatcatgggctgg ggatgtagagacaagagcacaggagttcaggatcatctgtggctacaaag tgagcttgaggacaacctggggcctttgtctcaaacaaaactaaacaccc aaagacaacaacatagcatcctgctgggggtggggggagtggg
quality values	Open. Hide. 40 38 28 41 62 54 62 46 62 62 54 47 41 17 41 62 62 62 49 62 62 62 62 47 37 59 62 62 62 62 62 59 59 59 56 56 59 49 34 28 25 25 28 32 54 62 56 62 62 59 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 34 59 59 54 35 28 54 56 49 49 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 54 54 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 46 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 54 54 58 58 58 41 42 58 58 58 58 58 52 58 58 46 54 58 54 58 58 54 58 58 58 58 58 58 58 58 54 58 58 47 58 58 58 58 54 58 54 52 39 58 54 54 52 54 58 58 58 58 53 53 53 49 58 41 58 53 50 50 51 54 51 49 50 50 58 54 58 58 58 54 58 46 29 58 54 51 48 37 58 50 58 33 41 46 54 47 46 50 47 49 46 58 58 58 58 46 46 51 53 33 46 52 53 58 53 53 54 58 50 52 58 50 49 46 22 51 46 30 52 50 50 58 43 37 53 41 51 40 44 37 39 52 29 58 51 41 50 30 49 40 53 53 41 51 53 39 39 53 38 37 37 47 42 51 41 31 54 54 43 52 41 48 42 45 38 39 53 51 33 54 54 40 42 52 21 37 45 52 53 37 32 40 52 53 43 43 43 53 35 33 31 30 34 38 41 42 54 45 53 42 46 30 54 37 53 52 54 34 31 33 35 53 53 47 15 46 32 52 49 51 53 52 40 39 21 34 12 24 15 28 32 31 53 31 33 40 40 35 26 32 40 29 33 53 22 29 24 30 31 29 45 32 45 33 31 30 31 31 31 31 32 27 26 25 13 30 33 33 18 34 18 18 51 51 28 31 29 30 26 31 26 25 18 48 48 31 29 31 26 31 27 23 43 32 48 29 36 31 36 47 48 24 30 18 26 48 48 35 33 31 16 38 31 48 32 30 21 46 9 9 31 25 31 26 39 23 30 28 22 29 7 41 23 25 31 32 25 31 38 26 34 31 27 17 10 13 35 25 23 21 18 28 33 32 11 30 46 48 48 31 11 11 24 11 10 17 13 7 5 20 18 12 4 20 11 16 35 9 6 7 6 22 14 44 25 18 44 19 14 31 11 10 10 9 30 16 31 33 21 27 32 11 20 6 11 23 14 12 5 5 5 6 22 11 32 24 23 14 32 48 23 20 10 18 24 9 10 14 4 8 33 10 19 18 14 10 9 14 16 5 6 7 5 5 13 9 13 48 48 29 15 27 24 29 9 10 7 5 20 18 43 6 20 20 20 28 10 30 8 6 14 20 7 18 12 27 17 10 13 40 14 11 30 12 8 8 7 11 7 11 11 12 28 40 6 7 11 6 5 6 11 20 47 38 16 8 7 6 7 21 19 7 28 25 11 11 13 23 10 6 19 6 4 5 12 16 7 6 3 5 6 28 7 5 13 7 6 7 27 17 7 10 12 16 7 3 20 10 7 11 4 4 4 11 13 5 5 5 18 5 6 17 17	Open. Hide. 62 62 62 62 62 49 49 56 56 54 10 43 43 28 28 28 27 28 32 46 59 59 49 49 56 62 59 59 62 62 62 62 59 62 59 62 59 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 59 51 56 43 33 59 59 49 59 56 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 59 59 59 62 62 62 62 59 62 59 59 62 54 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 59 56 59 62 62 59 59 62 59 59 62 62 62 62 62 62 59 62 59 62 59 62 59 62 59 62 62 56 62 59 46 62 59 62 59 56 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 59 62 59 62 59 62 62 62 59 62 51 59 59 62 62 62 62 62 62 62 62 62 62 56 56 62 62 51 62 62 62 62 62 56 56 56 56 56 56 62 54 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 56 62 62 56 62 62 62 62 62 62 62 62 56 62 22 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr12_82955056_82956092
seq2: B6Ng01-177H10.b_37_1082 (reverse)

seq1  AAGCTTATCAGTGGGTTAAAGGGGCGGGGCATCTCCATCG-TTCATCTCC  49
      ||||||||||||||  |||| |||||||  |||||||||| || ||||| 
seq2  AAGCTTATCAGTGG--TAAA-GGGCGGGCAATCTCCATCGTTTAATCTCA  47

seq1  ATGGGCAATAGAGGGG-ACGCA-CCAC-TGAGTGGGAAAGGTCCTGA-GT  95
       ||||| ||||||||| ||||| |||| ||||||||||||||||||| ||
seq2  TTGGGC-ATAGAGGGGAACGCACCCACTTGAGTGGGAAAGGTCCTGAGGT  96

seq1  TCCATCCCTAGCACAGTAAAAGCCACACCTA-TGTACATGACTACGAAAC  144
      ||||| ||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCCATTCCTAGCACAGTAAAAGCCACACCTATTGTACATGACTACGAAAC  146

seq1  TAGGTCT--CTAT-ACTAATTCT--CTAATTTGGGAACACC-TAACATTG  188
      |||||||   ||| |||||||||   ||||||||||||||| ||||| ||
seq2  TAGGTCTTCTTATAACTAATTCTTCTTAATTTGGGAACACCTTAACA-TG  195

seq1  CG-ATGGC-TTTTCTAATGTGTTATAGATAGCTATATTGGAACTCAGAGT  236
      || ||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CGAATGGCTTTTTCTAATGTGTTATAGATAGCTATATTGGAACTCAGAGT  245

seq1  TCTGGGAGCCTTTTAGAAAAGATTTATATTCATTTTATGTGTATAAATGG  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGAGCCTTTTAGAAAAGATTTATATTCATTTTATGTGTATAAATGG  295

seq1  CCTGCCTGCATGTATATATGTGTACCACACGCATGAGTGGTGTCTGAGGG  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTGCATGTATATATGTGTACCACACGCATGAGTGGTGTCTGAGGG  345

seq1  GATCGGAGTTACAGACACAGACAGTTGTAAACTGCAGTGAAGATGCTGGG  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGGAGTTACAGACACAGACAGTTGTAAACTGCAGTGAAGATGCTGGG  395

seq1  AACTGAACGTGGGTCACCTAGGAAGGCAGCATCTTTAACCACAGACCCAA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAACGTGGGTCACCTAGGAAGGCAGCATCTTTAACCACAGACCCAA  445

seq1  CTCCTCAGGCCCAGAAGTCTGTGTTTTTAGTGAAAGGTCTTAATTTGGGC  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCAGGCCCAGAAGTCTGTGTTTTTAGTGAAAGGTCTTAATTTGGGC  495

seq1  AGCTTGTAGACTACACTGTGAGAAGTACTTGTCACAGGGTTCAAACCCAT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTAGACTACACTGTGAGAAGTACTTGTCACAGGGTTCAAACCCAT  545

seq1  AATGAGTTTTAAGGATGGAATGCAGAGAAAGGGAGAATCCAGAAGGGCAG  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTTTTAAGGATGGAATGCAGAGAAAGGGAGAATCCAGAAGGGCAG  595

seq1  GGCGTTTTATTTTTGTTTTGCTCTCCACTGTGATTTTGAGATTTTCCATG  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTTTTATTTTTGTTTTGCTCTCCACTGTGATTTTGAGATTTTCCATG  645

seq1  CATATCACTCTTCTAGAACATATATAGAGAACTGTACGCTATTGGTATAC  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCACTCTTCTAGAACATATATAGAGAACTGTACGCTATTGGTATAC  695

seq1  AGTTAGAAGATATTATGTATATTATCATTGGTGAAATCTCAGCAACAAAC  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGAAGATATTATGTATATTATCATTGGTGAAATCTCAGCAACAAAC  745

seq1  AGGGAAAATAACACCCCTAGCCAAACCTCAAAATTCAACCCAAATGAATA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAATAACACCCCTAGCCAAACCTCAAAATTCAACCCAAATGAATA  795

seq1  AACACAACTAATGAGAAGAGCATTCCCATGTACTATTAAGGTTTCCATTT  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAACTAATGAGAAGAGCATTCCCATGTACTATTAAGGTTTCCATTT  845

seq1  AAAAGGCTGTAAAAATATCTCCATGGGCCATGCCTTTTTATCTTATCCTT  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCTGTAAAAATATCTCCATGGGCCATGCCTTTTTATCTTATCCTT  895

seq1  AGAAATTTTCATTTTTGTTATTGGGAGGGAGCAAACAAAAATCCTGCCAT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTTCATTTTTGTTATTGGGAGGGAGCAAACAAAAATCCTGCCAT  945

seq1  CAAAACAAAACGCAATGAGTCTGCAGGACCCAATACCCCGAGTGAGACTC  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAAACGCAATGAGTCTGCAGGACCCAATACCCCGAGTGAGACTC  995

seq1  TTCAGCCCTGCTTGGTTTCACTCACTTGGGGCTAGGACTAATTTAGAATT  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCCTGCTTGGTTTCACTCACTTGGGGCTAGGACTAATTTAGAATT  1045

seq1  C  1037
      |
seq2  C  1046

seq1: chr12_82783082_82783424
seq2: B6Ng01-177H10.g_72_414

seq1  TTTCTCATTCACTGAAGCATTCCAGTATCTCTTGGAGTAGCAACCAGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATTCACTGAAGCATTCCAGTATCTCTTGGAGTAGCAACCAGAGC  50

seq1  TTCTTGACTATGAAGTGTCTGATTACACACAGAAAGAGCAAGATAGGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGACTATGAAGTGTCTGATTACACACAGAAAGAGCAAGATAGGGGA  100

seq1  GGCTAGCATTGTTATTTAGTACGAAAATGTTAAGCTTCCATACAGGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGCATTGTTATTTAGTACGAAAATGTTAAGCTTCCATACAGGAAAA  150

seq1  TAAGAGTATGGTAAGTGTTTGAGCCAAGTCATTTTGGCATCATGGGCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTATGGTAAGTGTTTGAGCCAAGTCATTTTGGCATCATGGGCTGG  200

seq1  GGATGTAGAGACAAGAGCACAGGAGTTCAGGATCATCTGTGGCTACAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTAGAGACAAGAGCACAGGAGTTCAGGATCATCTGTGGCTACAAAG  250

seq1  TGAGCTTGAGGACAACCTGGGGCCTTTGTCTCAAACAAAACTAAACACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTGAGGACAACCTGGGGCCTTTGTCTCAAACAAAACTAAACACCC  300

seq1  AAAGACAACAACATAGCATCCTGCTGGGGGTGGGGGGAGTGGG  343
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAACAACATAGCATCCTGCTGGGGGTGGGGGGAGTGGG  343

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information