BAC Information

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BAC

Clone NameB6Ng01-178A02
Chromosome12 (Build37)
Map Location 24,475,182 - 24,475,900
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042895, LOC100043435, EG628081, LOC100042903, LOC100043440, EG668518, LOC100043445, LOC668697, LOC100042923, LOC677338, EG668701
Downstream geneLOC668471, LOC668703, LOC546534, 9030624G23Rik, EG668710, LOC100042945, EG668711, EG668714, LOC629364, Taf1b, Grhl1, EG629383, Klf11, Cys1, Rrm2, LOC668719
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178A02.bB6Ng01-178A02.g
ACCGA005117GA005118
length7311,152
definitionB6Ng01-178A02.b B6Ng01-178A02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagcttccctgaggtcctctcacagcacccaacagcagagctc
agagcaggacacagaaccattcaagcctgcacagccaaagtgaacttggg
gaaaggcacccataagatcctgcctccttgtctgactggcaggtctgcct
gtggagaccttgattggccagtgggtctcacccttcttcaaggttaaagt
gtgcttcaggtccagggccacaccttttccagatctcgggtgtggtttgc
actacattagcatttgagccagccccccaagaggactctcacccctccca
gctctgggggagaactcaacattcatgtggggcattgggctatgcacaga
caggttggtcttcagttgagctgaggtctgaaccctgggagggtgataat
tcacttgacaaggaacgcatcaattccctcatgcttctggaactcaggct
cctgcctaagttaccgtccccctcccccacccccaccccagccaccacaa
gagaagcctggctaaaagtcaggtaggcaatatcccaagcttctgacctt
caggctaaactcctccacagttacctagcaacagtaaagaccataaaaag
ggctgttcagccctgcctatctctcttgctctcactccttctatctctta
cctctcactttttgcactgttctctccgctttcctttctctttatcctct
cccctcctctcctctcccctcccctcccctc
gaattctccactttccttggttagggggtacaggggggcagctagtgttg
caaacccaggtatccaaagtctgcagaacccagcggtgcccaagaatttt
cttacctgtcttggagtggccggtgttggtatttgagtcacagtcctttt
tctatcctctgtcagccaccgtttttcatcccggtgggtatatcccaaat
agactacttccatctgacatagctgggcttttgtagcagaggcccagtaa
cccaactcacccagttctgctagcaatctcttggtcccctgccagcattc
tctctccatggttgcagcaaggagcaagtcatcaacatattgaagcagag
ttatctgggagttttcagcttgaaaggaggctaaatctcgatgtagagcc
tcatcaaaaagggtgggggagtttttgaacccctggggttaccgtgtcca
ggtcaattgtcccatttgtccagtgtcaggatctctccactcaaaggctg
gagagatgggctggctggagggatttaacttcaggcaaaagaaagcatct
tttcaatcaaatactatgtaccattttcgctctggagggagtgagctgag
gaggttatagggattaggaacagttgggtgaatatcttggaccctcttat
tgacctctctcgggtcttggactggtcagtagtcactcgtgccaggtttc
tttaccggcagtaaaggagtattccagggtgactggcaaggtaccaaaat
acctaattgtaatagtctctgaatatgtggcctgattccatctcttgctt
catggctcattgggtattgttgcactcctataggggttgcatccgttttc
agtcccacgaccacagggggaactctgacagccattcccaatgcctccag
tctctgcccatgctctgggggaaagcagtcaatccaatctttaaggtctg
gcatctcgtttgctttttgctttctagaaaaaacaaacgggggctctggt
aaggccctgcatcactcttcttacctaaacaaattggtggggtggtcctc
atcggctcccttaagccataaaggccggcgttaacctgtctaccttctcc
tttcttgagcatgttgatgagttctaattctcggcagtccgtaagtaact
at
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_24475182_24475900
seq2: B6Ng01-178A02.b_32_762

seq1  GAATTCAGAGCTTCCCTGAGGTCCTCTCACAGCACCCAACAGCAGAGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGCTTCCCTGAGGTCCTCTCACAGCACCCAACAGCAGAGCTC  50

seq1  AGAGCAGGACACAGAACCATTCAAGCCTGCACAGCCAAAGTGAACTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGGACACAGAACCATTCAAGCCTGCACAGCCAAAGTGAACTTGGG  100

seq1  GAAAGGCACCCATAAGATCCCGCCTCCTTGTCTGACTGGCAGGTCTGCCT  150
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAAAGGCACCCATAAGATCCTGCCTCCTTGTCTGACTGGCAGGTCTGCCT  150

seq1  GTGGAGACCTTGATTGGCCAGTGGGTCTCACCCTTCTTCAAGGTTAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGACCTTGATTGGCCAGTGGGTCTCACCCTTCTTCAAGGTTAAAGT  200

seq1  GTGCTTCAGGTCCAGGGCCACACCTTTTCCAGATCTCGGGTGTGGTTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCAGGTCCAGGGCCACACCTTTTCCAGATCTCGGGTGTGGTTTGC  250

seq1  ACTACATTAGCATTTGAGCCAGCCCCCCAAGAGGACTCTCACCCCTCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATTAGCATTTGAGCCAGCCCCCCAAGAGGACTCTCACCCCTCCCA  300

seq1  GCTCTGGGGGAGAACTCACCATTCATGTGGGGCATTGGGCTATGCACAGA  350
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCTCTGGGGGAGAACTCAACATTCATGTGGGGCATTGGGCTATGCACAGA  350

seq1  CAGGTTGGTCTTCAGTTGAGCTGAGGTCTGAACCCTGGGAGGGTGATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTGGTCTTCAGTTGAGCTGAGGTCTGAACCCTGGGAGGGTGATAAT  400

seq1  TCATTTGACAAGGAACGCATCAATTCCCTCATGCTTCTGGAACTCAGGCT  450
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGACAAGGAACGCATCAATTCCCTCATGCTTCTGGAACTCAGGCT  450

seq1  C------------CCGTCCCCCTCCCCCACCCCCACCCCAGCCACCACAA  488
      |            |||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTAAGTTACCGTCCCCCTCCCCCACCCCCACCCCAGCCACCACAA  500

seq1  GAGAAGCCTGGCTAAAAGTCACAAAGGCAATGTCCCAAGCTTCTGACCTT  538
      |||||||||||||||||||||   ||||||| ||||||||||||||||||
seq2  GAGAAGCCTGGCTAAAAGTCAGGTAGGCAATATCCCAAGCTTCTGACCTT  550

seq1  CAGGCTAAACTCCTCCCCAGTTACCTAGCAACAGTAAAGACCATAAAAAG  588
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAGGCTAAACTCCTCCACAGTTACCTAGCAACAGTAAAGACCATAAAAAG  600

seq1  GGCTGTTCAGCCCTGCCTATCTCTCTTGCTCTCACTCCTTCAATCTCTTA  638
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGCTGTTCAGCCCTGCCTATCTCTCTTGCTCTCACTCCTTCTATCTCTTA  650

seq1  CCTCTCACTTCTTGCACTCCTCTCTCCTCTTTCCTTTCTCTTTGTCCTCT  688
      |||||||||| |||||||  ||||||| ||||||||||||||| ||||||
seq2  CCTCTCACTTTTTGCACTGTTCTCTCCGCTTTCCTTTCTCTTTATCCTCT  700

seq1  CCTCTCCTCTCCTCTCCTCTCCTCTCCTCTC  719
      || |||||||||||||| |||| |||| |||
seq2  CCCCTCCTCTCCTCTCCCCTCCCCTCCCCTC  731