BAC Information

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BAC

Clone NameB6Ng01-181M11
Chromosome12 (Build37)
Map Location 60,639,595 - 60,640,621
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33, LOC665628, LOC238199, LOC665639
Downstream geneLOC665644, EG622488, LOC665665
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181M11.bB6Ng01-181M11.g
ACCGA007848GA007849
length1,2591,019
definitionB6Ng01-181M11.b B6Ng01-181M11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacaaggccctatccctaaatgaagagctataggcaatcaatgg
ctattaatagagtgggatcaatattctctaaggaaaaactcttggatagg
gttcccataatcctcagggatcagccctaaagggatacataacaagcaac
actaaatagtcacaacagcttgtatacatgcaataatagtaattaaaagg
aagagatcgtgaatttgagaggaggcaggaaaggtaaaggaggcgaattg
gaaaagtgtgaatagaaattatgtaaatgcagtactcaaatctgaaatac
tcagaaaataaattttaatagaagaaaaccaaacagaatcaatcagttct
cctttatacatggccttttcatacaatgttcttttaaatagattacatgc
agtgattttttaaaatattcaaccaggtagtcagatataatagtgatcca
tatcttcttactgttaaatagcattccatcgtggttacatctcagttcat
ctgctttatattgatgaacagtttatgaatcccttcagccctgaatggcc
ccagcctcccacatgctgtaaagccattttatgataacacattttcattt
ttcttgggtaaatatctacacacagtgcctgatcataagggaagtgttta
tttaatcatggtactcagaagacaggggtaggaggattgccaaaagtttg
agaccagtctggtctagatatgagtttcaaaccatccagcattatatagt
caaactctgacacaaaaacaaagaaataattaggcctttctccaaagagg
ctgtaccatgtcttcctcaacaaagcataagagttgatgttattttattt
ctttattggtattttacatttttgacgtttatagtcatagactttctggt
aattctgtagctgcatcttttacgttttttgcatatgttctaaatgcttg
taactagaagcattaatgattacaaaccgtaaaaaagaaaagaatttatg
ggaaaatgtttcctaaacgcatagcccttactcaagttcccacagtcgca
acatgacagtcagaagaagcagatgacgagcaaggagcgtcagtgtctga
gcagaacccaattcaattcttcttgtgactataaagaaagaagctttccc
actgacctgcagaaccctgaatcttagcttcttgcttagaattagagata
cctaactactttaggctaacaccggaacttatattgaagatatactcacc
ttttgtata

tttcactgagccattttgactttgatcttgcctagactaatttctgaaat
tgagagagcaaggaaaacataagacacaattggccgttttgaggggaacc
cgttaaatatagaatgatttaaccaaagacagattatcagtactaaagct
gttgaattcaaaatttctgctttatactttatgttatggtatttaccttc
ttccatggggttgtactgcaaatatcccaagttcaatatatatatatgtt
tgttgacttaaactaaaattttacttaaaatgaacaagtgagtaaacaga
tggggttatcatctaaggattgtcaagctaggaactccatctgaagctat
tttgctaggattgttctctgattaaatgaaagctttcctagaacagcgtg
ttcacagcaacttttctcacaatgccttttgataagcaggcctgacaaat
gcagatcatgagagcaggcttataagtaacccacacagataaatggcaac
catacgaatacactgcattttcctggtaaatggtattcacctctttcagg
tagaatgacttaatgtctcaaattaagaccagcgtttggatcagatgtct
ggaagattctcccatttgtggaaggaatttctctccgtgaactgcatctg
atgttttagcatttcaagtcataaatcggatactggatatgtacatgtgt
tcccagggtttccctttgtgtactacagctgcaattatatgattttcatt
ggaggagatagcagggtacagtaatggaagattgtgtgttgagatgtatt
tagtgatagggaaataccctttcaagtgggaagctgctttcagttaagta
gcatgtgaactggagttcacacaggtcacttccagtaagatgaggatgaa
agcatatttgagagctcatggtgttttttcttcactgcttaatctagaca
tcaacaaaattgacttccctctttcacctaagaaagcaaccacactagtt
atttgactagccttatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_60639595_60640621
seq2: B6Ng01-181M11.g_142_1160

seq1  TTTCACTGAGCCATTTTGACTTTGATCTTGCCTAGACTAATTTCTGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTGAGCCATTTTGACTTTGATCTTGCCTAGACTAATTTCTGAAAT  50

seq1  TGAGAGAGCAAGGAAAACATAAGACACAATTGGCCGTTTTGAGGGGAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAGCAAGGAAAACATAAGACACAATTGGCCGTTTTGAGGGGAACC  100

seq1  CGTTAAATATAGAATGATTTAACCAAAGACAGATTATCAGTACTAAAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTAAATATAGAATGATTTAACCAAAGACAGATTATCAGTACTAAAGCT  150

seq1  GTTGAATTCAAAATTTCTGCTTTATACTTTATGTTATGGTATTTACCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATTCAAAATTTCTGCTTTATACTTTATGTTATGGTATTTACCTTC  200

seq1  TTCCATGGGGTTGTACTGCAAATATCCCAAGTTCAATATATATATATGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGGGGTTGTACTGCAAATATCCCAAGTTCAATATATATATATGTT  250

seq1  TGTTGACTTAAACTAAAATTTTACTTAAAATGAACAAGTGAGTAAACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACTTAAACTAAAATTTTACTTAAAATGAACAAGTGAGTAAACAGA  300

seq1  TGGGGTTATCATCTAAGGATTGTCAAGCTAGGAACTCCATCTGAAGCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTATCATCTAAGGATTGTCAAGCTAGGAACTCCATCTGAAGCTAT  350

seq1  TTTGCTAGGATTGTTCTCTGATTAAATGAAAGCTTTCCTAGAACAGCGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTAGGATTGTTCTCTGATTAAATGAAAGCTTTCCTAGAACAGCGTG  400

seq1  TTCACAGCAACTTTTCTCACAATGCCTTTTGATAAGCAGGCCTGACAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGCAACTTTTCTCACAATGCCTTTTGATAAGCAGGCCTGACAAAT  450

seq1  GCAGATCATGAGAGCAGGCTTATAAGTAACCCACACAGATAAATGGCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATCATGAGAGCAGGCTTATAAGTAACCCACACAGATAAATGGCAAC  500

seq1  CATACGAATACACTGCATTTTCCTGGTAAATGGTATTCACCTCTTTCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACGAATACACTGCATTTTCCTGGTAAATGGTATTCACCTCTTTCAGG  550

seq1  TAGAATGACTTAATGTCTCAAATTAAGACCAGCGTTTGGATCAGATGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGACTTAATGTCTCAAATTAAGACCAGCGTTTGGATCAGATGTCT  600

seq1  GGAAGATTCTCCCATTTGTGGAAGGAATTTCTCTCCGTGAACTGCATCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATTCTCCCATTTGTGGAAGGAATTTCTCTCCGTGAACTGCATCTG  650

seq1  ATGTTTTAGCATTTCAAGTCATAAATCGGATACTGGATATGTACATGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTAGCATTTCAAGTCATAAATCGGATACTGGATATGTACATGTGT  700

seq1  TCCCAGGGTTTCCCTTTGTGTACTACAGCTGCAATTATATGATTTTCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGGTTTCCCTTTGTGTACTACAGCTGCAATTATATGATTTTCATT  750

seq1  GGAGGAGATAGCAGGGTACAGTAATGGAAGATTGTGTGTTGAGATGTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGATAGCAGGGTACAGTAATGGAAGATTGTGTGTTGAGATGTATT  800

seq1  TAGTGATAGGGAAATACCC-TTCAAGTGGGAAGCTGCTTTCAGTTAAGTA  849
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAGTGATAGGGAAATACCCTTTCAAGTGGGAAGCTGCTTTCAGTTAAGTA  850

seq1  GCATGTGAACTGGAGTTCACACAGGTCACTTCCAGTAAGATGAGGATGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGAACTGGAGTTCACACAGGTCACTTCCAGTAAGATGAGGATGAA  900

seq1  AGCATATTTGAAGAGCTCATGGTG-TTTTTCTTCACTGCTTAATCTAGAC  948
      |||||||||| ||||||||||||| |||||||||||||||||||||||||
seq2  AGCATATTTG-AGAGCTCATGGTGTTTTTTCTTCACTGCTTAATCTAGAC  949

seq1  ATCCAACAAAAATGACCTTTCCCCCCTTTTCACCTAGAAAAGCACACACA  998
      || |||||||| ||||  ||||| |  |||||||||  ||||||  ||||
seq2  AT-CAACAAAATTGAC--TTCCCTC--TTTCACCTAAGAAAGCAACCACA  994

seq1  CTAAGGTTATTTGAACTAGCCTTTATTTT  1027
      |||  |||||||| ||||||| |||||||
seq2  CTA--GTTATTTG-ACTAGCC-TTATTTT  1019


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