BAC Information

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BAC

Clone NameB6Ng01-181M14
Chromosome12 (Build37)
Map Location 52,066,826 - 52,067,655
singlet/doubletsinglet
Overlap genenone
Upstream genePrkcm
Downstream geneLOC100039517, LOC636070, LOC100039525, 6030408C04Rik, Scfd1, LOC620390, LOC100039578, Coch, Strn3, Ap4s1, Hectd1, EG544864, LOC100039476, Heatr5a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181M14.bB6Ng01-181M14.g
ACCGA007854GA007855
length834932
definitionB6Ng01-181M14.b B6Ng01-181M14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattaaaatggagacaatggtaagcatttttcacaagtctcttc
agatactactactaccccggggaacagttccagaggcttctactgcacac
ggtttgaaagggaagctcttcatattggatttttcccgtcaggagccagt
gcctcctcttggcagagctttgctgcgagttctcttgttcagttatgaac
tcctccatagcctagtgcatcgtaaaggagctcatctcctctggtcttca
gagacgcctctcagacttggtgttttctgtaatatatatatttttttaca
tttgctaaaactgtgaccatatttagtagctagctatacactttcttcca
cacttccataaagcagttttgagcccagcatcccatacacatagagtagg
attttgactgatacagatatggttagaagataatgtgtaggcggtaggga
gattaggggatggaaagactgaagatttattagctctggaaaaggattcg
ttacctcttgacctcaagactgactccaaagtacagtgacagagacaggg
atttggaggcaggctgccaaccagatgtaactgggactgtttagaattac
tttgattctaaaataagtaatgaaataatactgtaagggttatcaggact
tctctcaaagttgtggttctattacaattcataggtatcagtgaaagaga
tcccaggaacaaatatgcacacatctcttaatttcctaccattgatactt
gatttagtttttgtgcacactcttggggaactggctcatctggcctagag
tttaattaggataaaatcggggggggggttggtt
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgatttgttaatt
aggattttgtccctgtgccctttagtgagtctagctaagggtttatctat
cttgttgatttttctcaaagaaccaactccctcgtttgggttattctttg
aatagttcttcttgtttccacttggttgatttcacccctgagtttgatta
ttcatgccgtctactcctcttgggtgaatttgctttcctttttttctaga
gctttttagatgtgttgtcaagctgctagtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_52066826_52067655
seq2: B6Ng01-181M14.b_45_878 (reverse)

seq1  AACCAA-CCCCCCCCCGA-TTTATCCTAATTAAACTCTA-GCCAGATGAG  47
      |||||| ||||||||||| |||||||||||||||||||| ||||||||||
seq2  AACCAACCCCCCCCCCGATTTTATCCTAATTAAACTCTAGGCCAGATGAG  50

seq1  CCAGTT-CCCAAGAGTGTGCACAAAAACTAAATCAAGTATCAATGGTAGG  96
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCCCCAAGAGTGTGCACAAAAACTAAATCAAGTATCAATGGTAGG  100

seq1  AAATTAAGAGATGTGTGCATATTTGTTCCTGGGATCTCTTTCACTGATAC  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAGAGATGTGTGCATATTTGTTCCTGGGATCTCTTTCACTGATAC  150

seq1  CTATGAATTGTAATAGAACCACAACTTTGAGAGAAGTCCTGATAACCCTT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAATTGTAATAGAACCACAACTTTGAGAGAAGTCCTGATAACCCTT  200

seq1  ACAGTATTATTTCATTACTTATTTTAGAATCAAAGTAATTCTAAACAGTC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATTATTTCATTACTTATTTTAGAATCAAAGTAATTCTAAACAGTC  250

seq1  CCAGTTACATCTGGTTGGCAGCCTGCCTCCAAATCCCTGTCTCTGTCACT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTACATCTGGTTGGCAGCCTGCCTCCAAATCCCTGTCTCTGTCACT  300

seq1  GTACTTTGGAGTCAGTCTTGAGGTCAAGAGGTAACGAATCCTTTTCCAGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTGGAGTCAGTCTTGAGGTCAAGAGGTAACGAATCCTTTTCCAGA  350

seq1  GCTAATAAATCTTCAGTCTTTCCATCCCCTAATCTCCCTACCGCCTACAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATAAATCTTCAGTCTTTCCATCCCCTAATCTCCCTACCGCCTACAC  400

seq1  ATTATCTTCTAACCATATCTGTATCAGTCAAAATCCTACTCTATGTGTAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTTCTAACCATATCTGTATCAGTCAAAATCCTACTCTATGTGTAT  450

seq1  GGGATGCTGGGCTCAAAACTGCTTTATGGAAGTGTGGAAGAAAGTGTATA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCTGGGCTCAAAACTGCTTTATGGAAGTGTGGAAGAAAGTGTATA  500

seq1  GCTAGCTACTAAATATGGTCACAGTTTTAGCAAATGTAAAAAAATATATA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCTACTAAATATGGTCACAGTTTTAGCAAATGTAAAAAAATATATA  550

seq1  TATTACAGAAAACACCAAGTCTGAGAGGCGTCTCTGAAGACCAGAGGAGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACAGAAAACACCAAGTCTGAGAGGCGTCTCTGAAGACCAGAGGAGA  600

seq1  TGAGCTCCTTTACGATGCACTAGGCTATGGAGGAGTTCATAACTGAACAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCCTTTACGATGCACTAGGCTATGGAGGAGTTCATAACTGAACAA  650

seq1  GAGAACTCGCAGCAAAGCTCTGCCAAGAGGAGGCACTGGCTCCTGACGGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTCGCAGCAAAGCTCTGCCAAGAGGAGGCACTGGCTCCTGACGGG  700

seq1  AAAAATCCAATATGAAGAGCTTCCCTTTCAAACCGTGTGCAGTAGAAGCC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCCAATATGAAGAGCTTCCCTTTCAAACCGTGTGCAGTAGAAGCC  750

seq1  TCTGGAACTGTTCCCCGGGGTAGTAGTAGTATCTGAAGAGACTTGTGAAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAACTGTTCCCCGGGGTAGTAGTAGTATCTGAAGAGACTTGTGAAA  800

seq1  AATGCTTACCATTGTCTCCATTTTAATTGAATTC  830
      ||||||||||||||||||||||||||||||||||
seq2  AATGCTTACCATTGTCTCCATTTTAATTGAATTC  834