BAC Information

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BAC

Clone NameB6Ng01-182P12
Chromosome12 (Build37)
Map Location 37,640,118 - 37,747,019
singlet/doubletdoublet
Overlap genenone
Upstream geneAgr3, Agr2, Tspan13, EG432649, Bzw2, Ankmy2, 1700108M19Rik, Sostdc1, 4930579E17Rik, LOC638858
Downstream geneMeox2, A530016O06Rik, LOC100043139, Dgkb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182P12.bB6Ng01-182P12.g
ACCGA008718GA008719
length9081,111
definitionB6Ng01-182P12.b B6Ng01-182P12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,640,118 - 37,641,024)(37,745,897 - 37,747,019)
sequence
gaattccctctgctttaagcaatgaattctttagcagaggagtctaaact
gtatccatggcaacccagcagctttagtatagactaagtgctttcattac
taaaattttaaaggctctccttggaatatatactttgttactgattttga
ctagaacatatgtgattttctttcatagaaaaaagtgctatatttttgct
ttttatggattatattttgaagtcatctaaaataaggacttgctagttag
gtctttctttagtaaagttacagttactgtttggtaaacattctaacaat
gacaaacgatcagctagtctaattttatttatcgtatgataatatatctc
aacctagaaaagtaaaactcctaagaaactgagtcataaatttttttaat
catcataataagagtgctaaagaccagagatagaccatcttagaaggagc
aacgcatctcatgcattgtccaactatgtccagtctcactatacagctat
caatacatgctgtacaattacacttgctaaagaattaattccccagtcaa
acaaatacgtacaacgggcagtttaatgtgttttatttcaaacattatct
tgaaggtctcagataaaaattaatagcataaaacaaattttgtgtcttaa
tgaagaaatgacttgtgtatcagtcaggttggaatacacacttcattctc
cataatagcagaaagactagattttcttacttaacattcacatggcctgg
gtaatgcctatggccagggagcaaaactaatatgaataaataagctcaga
tgatagttttcagagattaaacttctagacacacaaggaagattgttagt
ttaaaacatctccccagtgccagggccaggaagcaggggtaggtggggtt
ggggaaca

gaattccatcttgtgaagggagtaaaatttatgtaaaagtctatttatat
tattatttatattattggcaaaaagcaggaaaaactttttcaactctttt
gtactagtgaccaaatccattttgcttgaaaattcttactttatcttact
caggtaaataactattttaaaaaggtctaccaaacaagcagcgattgtta
atcataaatttagtttaaaacaactcttacagatatacatgtatgaggat
atacatgagtatttattaaagataaaataagtccagtctctaaagagatc
aatatgcttggtaaattttatgtaaagaactaaatcttggcagaatattt
gatactacaagacaaagaacatctcatcatttttagtgtcaatctacatt
ttgacgatagaatcaccagatattagtagcctacagtactttctctgtct
tctcctttctacgctagccaaaaacctataatccagaaactacagcagtg
gtgataatcagcaaccatgaagctgatgcagagagcacaattggtttaaa
catcttcaatcaaccattcccttgaaaactgccatactatacagttttag
gaattcctagggatgaatccagtttcttgcatttgcttcacactcctaaa
atactttaacaagagtctgtctaccctaaatcttttgcctaagttttgtg
cttataaagacccttataattaaattgtgaccacaaagataatccaggat
actacctgtttttgaggatcattcacttacttacatctgaaaagcaaccc
cctacttcccactacacagatgatggggtttcttggcaccaatcagtggc
atattcttactgaacacatgtatgtagtagatttagatatgagagatcaa
acacaggctaactaaaacttcaaagaatcttgaatgggagtgtgtagggt
gacttcatcagtaagcatatcctgggaatttagaaagctggtgtcaatct
aagacactatatttttcctcttactcattctgtccaggaggtagacaaaa
gttcagcctataaatgccagcattcattaaggcttgaccagtagtatacc
cctctatgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_37640118_37641024
seq2: B6Ng01-182P12.b_47_954

seq1  GAATTCCCTCTGCTTTAAGCAATGAATTCTTTAGCAGAGGAGTCTAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCTGCTTTAAGCAATGAATTCTTTAGCAGAGGAGTCTAAACT  50

seq1  GTATCCATGGCAACCCAGCAGCTTTAGTATAGACTAAGTGCTTTCATTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCATGGCAACCCAGCAGCTTTAGTATAGACTAAGTGCTTTCATTAC  100

seq1  TAAAATTTTAAAGGCTCTCCTTGGAATATATACTTTGTTACTGATTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTTAAAGGCTCTCCTTGGAATATATACTTTGTTACTGATTTTGA  150

seq1  CTAGAACATATGTGATTTTCTTTCATAGAAAAAAGTGCTATATTTTTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACATATGTGATTTTCTTTCATAGAAAAAAGTGCTATATTTTTGCT  200

seq1  TTTTATGGATTATATTTTGAAGTCATCTAAAATAAGGACTTGCTAGTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGGATTATATTTTGAAGTCATCTAAAATAAGGACTTGCTAGTTAG  250

seq1  GTCTTTCTTTAGTAAAGTTACAGTTACTGTTTGGTAAACATTCTAACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCTTTAGTAAAGTTACAGTTACTGTTTGGTAAACATTCTAACAAT  300

seq1  GACAAACGATCAGCTAGTCTAATTTTATTTATCGTATGATAATATATCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACGATCAGCTAGTCTAATTTTATTTATCGTATGATAATATATCTC  350

seq1  AACCTAGAAAAGTAAAACTCCTAAGAAACTGAGTCATAAATTTTTTTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGAAAAGTAAAACTCCTAAGAAACTGAGTCATAAATTTTTTTAAT  400

seq1  CATCATAATAAGAGTGCTAAAGACCAGAGATAGACCATCTTAGAAGGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATAATAAGAGTGCTAAAGACCAGAGATAGACCATCTTAGAAGGAGC  450

seq1  AACGCATCTCATGCATTGTCCAACTATGTCCAGTCTCACTATACAGCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCATCTCATGCATTGTCCAACTATGTCCAGTCTCACTATACAGCTAT  500

seq1  CAATACATGCTGTACAATTACACTTGCTAAAGAATTAATTCCCCAGTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACATGCTGTACAATTACACTTGCTAAAGAATTAATTCCCCAGTCAA  550

seq1  ACAAATACGTACAACGGGCAGTTTAATGTGTTTTATTTCAAACATTATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATACGTACAACGGGCAGTTTAATGTGTTTTATTTCAAACATTATCT  600

seq1  TGAAGGTCTCAGATAAAAATTAATAGCATAAAACAAATTTTGTGTCTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTCTCAGATAAAAATTAATAGCATAAAACAAATTTTGTGTCTTAA  650

seq1  TGAAGAAATGACTTGTGTATCAGTCAGGTTGGAATACACACTTCATTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAATGACTTGTGTATCAGTCAGGTTGGAATACACACTTCATTCTC  700

seq1  CATAATAGCAGAAAGACTAGATTTTCTTACTTAACATTCACATGGCCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATAGCAGAAAGACTAGATTTTCTTACTTAACATTCACATGGCCTGG  750

seq1  GTAATGCCTATGGCCAGGGAGCAAAACTAATATGAATAAATAAGCTCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGCCTATGGCCAGGGAGCAAAACTAATATGAATAAATAAGCTCAGA  800

seq1  TGATAGTTTTCAGAGATTAAACTTCTAGACACACAAGGAAGATTGTTAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGTTTTCAGAGATTAAACTTCTAGACACACAAGGAAGATTGTTAGT  850

seq1  TTAAAACATCTCCCCAGTGCCAGGGCCAGGAAGCAGGGGTAGGT-GGGTT  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTAAAACATCTCCCCAGTGCCAGGGCCAGGAAGCAGGGGTAGGTGGGGTT  900

seq1  GGGGAGCA  907
      ||||| ||
seq2  GGGGAACA  908


seq1: chr12_37745897_37747019
seq2: B6Ng01-182P12.g_67_1177 (reverse)

seq1  TCTCTTAGA-GGTTATACTACTGGGTCAAGCCCTTAATGAATTGGCTGGC  49
      |||| |||| || ||||||||| ||||||| |||||||||||  ||||||
seq2  TCTCATAGAGGGGTATACTACT-GGTCAAG-CCTTAATGAAT--GCTGGC  46

seq1  ATTTTATA-GCTCTACTTTTGTCCTTACTTCCTGGACAGAAATGAGTAAA  98
      | |||||| |||  |||||||||  ||| |||||||||| ||||||| ||
seq2  A-TTTATAGGCTGAACTTTTGTC--TACCTCCTGGACAG-AATGAGT-AA  91

seq1  GAGGAAAATATTAGTGTCCTAGATATGAACACAGCTTTCTAAATTCCCAG  148
      ||||||||   ||||||| ||||| |||   |||||||||||||||||||
seq2  GAGGAAAAATATAGTGTCTTAGAT-TGACACCAGCTTTCTAAATTCCCAG  140

seq1  GAATATGCTTACTTGATGAAGTCACCCTACACACTTCCCATTTCAAGATT  198
      | |||||||||| ||||||||||||||||||||| ||||| |||||||||
seq2  G-ATATGCTTAC-TGATGAAGTCACCCTACACAC-TCCCA-TTCAAGATT  186

seq1  CTTTGAAGTTTTAGTTAGCCTGTGTTTGATCTCTCATATCTAAATCTACT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAGTTTTAGTTAGCCTGTGTTTGATCTCTCATATCTAAATCTACT  236

seq1  ACATACATGTGTTCAGTAAGAATATGCCACTGATTGGTGCCAAGAAACCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATGTGTTCAGTAAGAATATGCCACTGATTGGTGCCAAGAAACCC  286

seq1  CATCATCTGTGTAGTGGGAAGTAGGGGGTTGCTTTTCAGATGTAAGTAAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCTGTGTAGTGGGAAGTAGGGGGTTGCTTTTCAGATGTAAGTAAG  336

seq1  TGAATGATCCTCAAAAACAGGTAGTATCCTGGATTATCTTTGTGGTCACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGATCCTCAAAAACAGGTAGTATCCTGGATTATCTTTGTGGTCACA  386

seq1  ATTTAATTATAAGGGTCTTTATAAGCACAAAACTTAGGCAAAAGATTTAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTATAAGGGTCTTTATAAGCACAAAACTTAGGCAAAAGATTTAG  436

seq1  GGTAGACAGACTCTTGTTAAAGTATTTTAGGAGTGTGAAGCAAATGCAAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGACAGACTCTTGTTAAAGTATTTTAGGAGTGTGAAGCAAATGCAAG  486

seq1  AAACTGGATTCATCCCTAGGAATTCCTAAAACTGTATAGTATGGCAGTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGATTCATCCCTAGGAATTCCTAAAACTGTATAGTATGGCAGTTT  536

seq1  TCAAGGGAATGGTTGATTGAAGATGTTTAAACCAATTGTGCTCTCTGCAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGGAATGGTTGATTGAAGATGTTTAAACCAATTGTGCTCTCTGCAT  586

seq1  CAGCTTCATGGTTGCTGATTATCACCACTGCTGTAGTTTCTGGATTATAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCATGGTTGCTGATTATCACCACTGCTGTAGTTTCTGGATTATAG  636

seq1  GTTTTTGGCTAGCGTAGAAAGGAGAAGACAGAGAAAGTACTGTAGGCTAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGGCTAGCGTAGAAAGGAGAAGACAGAGAAAGTACTGTAGGCTAC  686

seq1  TAATATCTGGTGATTCTATCGTCAAAATGTAGATTGACACTAAAAATGAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCTGGTGATTCTATCGTCAAAATGTAGATTGACACTAAAAATGAT  736

seq1  GAGATGTTCTTTGTCTTGTAGTATCAAATATTCTGCCAAGATTTAGTTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTTCTTTGTCTTGTAGTATCAAATATTCTGCCAAGATTTAGTTCT  786

seq1  TTACATAAAATTTACCAAGCATATTGATCTCTTTAGAGACTGGACTTATT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATAAAATTTACCAAGCATATTGATCTCTTTAGAGACTGGACTTATT  836

seq1  TTATCTTTAATAAATACTCATGTATATCCTCATACATGTATATCTGTAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTAATAAATACTCATGTATATCCTCATACATGTATATCTGTAAG  886

seq1  AGTTGTTTTAAACTAAATTTATGATTAACAATCGCTGCTTGTTTGGTAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTTTAAACTAAATTTATGATTAACAATCGCTGCTTGTTTGGTAGA  936

seq1  CCTTTTTAAAATAGTTATTTACCTGAGTAAGATAAAGTAAGAATTTTCAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTAAAATAGTTATTTACCTGAGTAAGATAAAGTAAGAATTTTCAA  986

seq1  GCAAAATGGATTTGGTCACTAGTACAAAAGAGTTGAAAAAGTTTTTCCTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATGGATTTGGTCACTAGTACAAAAGAGTTGAAAAAGTTTTTCCTG  1036

seq1  CTTTTTGCCAATAATATAAATAATAATATAAATAGACTTTTACATAAATT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGCCAATAATATAAATAATAATATAAATAGACTTTTACATAAATT  1086

seq1  TTACTCCCTTCACAAGATGGAATTC  1123
      |||||||||||||||||||||||||
seq2  TTACTCCCTTCACAAGATGGAATTC  1111


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