BAC Information

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BAC

Clone NameB6Ng01-183F13
Chromosome12 (Build37)
Map Location 24,958,706 - 24,959,759
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043440, EG668518, LOC100043445, LOC668697, LOC100042923, LOC677338, EG668701, LOC668471, LOC668703, LOC546534, 9030624G23Rik, EG668710
Downstream geneLOC100042945, EG668711, EG668714, LOC629364, Taf1b, Grhl1, EG629383, Klf11, Cys1, Rrm2, LOC668719, Mboat2, EG629397, C330002I19Rik, Id2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183F13.bB6Ng01-183F13.g
ACCGA008994GA008995
length1,111940
definitionB6Ng01-183F13.b B6Ng01-183F13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaggcctcgttaatacttatctatgtctggagaatttccattt
atcagtatagtatactaatttgctcttggcatggaatgtagtctgtaata
tgaatttctatctcagtgagaattttagactctttctgcagacaactgaa
ttaatggctagtgctttattagttactgaataggttaaactccttgctgc
tatctggaatctaagaacactgggaaaaggctttagctatgttagaatac
aatcttaaaaggcattactataaggtaatgcttaatagagtgcacgtgaa
tctatacattagactaacgtggtggaaatttgattgttatgggttagggg
aaaacgccaaaactccaggaggggaatttccatggaactcttatcctcgt
taacagctttcaggcttttcgcctgtcaaactgacccaaactggagagct
gactttcgtcacacttccaggaggagagtcctagaaattcatttctcatg
agcagctttttggcatttctgcctcacaagctgattccactggagtgccc
tggcagtatgcaaggagtgacaagattttatctggtttacctgtaggtag
acaaaatgggggcgggcactaatatgccctctgcagttcagaaaggcaaa
gtggcacactcattgtcgcagagcaaagctgggtttgacctcatccttca
gttctcaagctctgcctagacactgtaccccaattcagcccacaggtaag
aaatgcctccatacctgatgctcaagggtcatgtgacaaagctacctgcc
cattatcctcaatgtttgtcatgagcctctcctgtaataacactgcaact
cacaaagtcgtcatcaagttgtcccccaagcagacacaagggaacacctg
tcttccttagtgggtctctcctgtctttttgcgagctcggtgaggtacca
gaccaccctgtctgtcctttctgtcaccttacagcctcacagctgggctc
tcagaagtcacccaaagggacatatatatctctgttcagacctctggaac
tcctgaagctgttcaaacagatctgatttttctaaccaatagatgtttgg
ctctgtgttgc
gaattctcacctgagtaatacagaatggcagagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatacaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagataaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaatactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatcccacaatacctctcctgggc
atatatccagaagatgttccaaccagtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaatgaacccagat
gcccctcaacagaggaatggatacagaaaatatggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaagtcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcacaataagtactcactgatgagtggatattagcccagaaacct
agaatacccaagcaataaggtacagtttgctaaacgcatgaaacttaaga
agaacgaagaccaaagtgtggacactttgccccttcttagaattgggaac
aaaacacccatggaacgagttacagagataaagtttggagctgagacgaa
aagatggaccatctagaaactgccatatctggggatccatcccataatca
gcttccaaacgctgacaccattgcatacactagcaagattttgctaaaag
gggtcataagagagcatcggatcctctgaaactggagatacagctataag
ccactatatgggtgctgggaactgaacctaggttcctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_24958706_24959759
seq2: B6Ng01-183F13.b_99_1153

seq1  ATAGTATACTAATTTGCTCTTGGCATGGAATGTAGTCTGTAATATGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTATACTAATTTGCTCTTGGCATGGAATGTAGTCTGTAATATGAATT  50

seq1  TCTATCTCAGTGAGAATTTTAGACTCTTTCTGCAGACAACTGAATTAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTCAGTGAGAATTTTAGACTCTTTCTGCAGACAACTGAATTAATG  100

seq1  GCTAGTGCTTTATTAGTTACTGAATAGGTTAAACTCCTTGCTGCTATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTGCTTTATTAGTTACTGAATAGGTTAAACTCCTTGCTGCTATCTG  150

seq1  GAATCTAAGAACACTGGGAAAAGGCTTTAGCTATGTTAGAATACAATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTAAGAACACTGGGAAAAGGCTTTAGCTATGTTAGAATACAATCTT  200

seq1  AAAAGGCATTACTATAAGGTAATGCTTAATAGAGTGCACGTGAATCTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCATTACTATAAGGTAATGCTTAATAGAGTGCACGTGAATCTATA  250

seq1  CATTAGACTAACGTGGTGGAAATTTGATTGTTATGGGTTAGGGGAAAACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGACTAACGTGGTGGAAATTTGATTGTTATGGGTTAGGGGAAAACG  300

seq1  CCAAAACTCCAGGAGGGGAATTTCCATGGAACTCTTATCCTCGTTAACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACTCCAGGAGGGGAATTTCCATGGAACTCTTATCCTCGTTAACAG  350

seq1  CTTTCAGGCTTTTCGCCTGTCAAACTGACCCAAACTGGAGAGCTGACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGGCTTTTCGCCTGTCAAACTGACCCAAACTGGAGAGCTGACTTT  400

seq1  CGTCACACTTCCAGGAGGAGAGTCCTAGAAATTCATTTCTCATGAGCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCACACTTCCAGGAGGAGAGTCCTAGAAATTCATTTCTCATGAGCAGC  450

seq1  TTTTTGGCATTTCTGCCTCACAAGCTGATTCCACTGGAGTGCCCTGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGCATTTCTGCCTCACAAGCTGATTCCACTGGAGTGCCCTGGCAG  500

seq1  TATGCAAGGAGTGACAAGATTTTATCTGGTTTACCTGTAGGTAGACAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAAGGAGTGACAAGATTTTATCTGGTTTACCTGTAGGTAGACAAAA  550

seq1  TGGGGGCGGGCACTAATATGCCCTCTGCAGTTCAGAAAGGCAAAGTGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGCGGGCACTAATATGCCCTCTGCAGTTCAGAAAGGCAAAGTGGCA  600

seq1  CACTCATTGTCGCAGAGCAAAGCTGGGTTTGACCTCATCCTTCAGTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATTGTCGCAGAGCAAAGCTGGGTTTGACCTCATCCTTCAGTTCTC  650

seq1  AAGCTCTGCCTAGACACTGTACCCCAATTCAGCCCACAGGTAAGAAATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTGCCTAGACACTGTACCCCAATTCAGCCCACAGGTAAGAAATGC  700

seq1  CTCCATACCTGATGCTCAAGGGTCATGTGACAAAGCTACCTGCCCATTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATACCTGATGCTCAAGGGTCATGTGACAAAGCTACCTGCCCATTAT  750

seq1  CCTCAATGTTTGTCATGAGCCTCTCCTGTAATAACACTGCAACTCACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATGTTTGTCATGAGCCTCTCCTGTAATAACACTGCAACTCACAAA  800

seq1  GTCGTCAATCAAGTTGT-CCCCAAGCAGACACAAGGAAACACCTGTCTTC  849
      |||||| |||||||||| |||||||||||||||||| |||||||||||||
seq2  GTCGTC-ATCAAGTTGTCCCCCAAGCAGACACAAGGGAACACCTGTCTTC  849

seq1  CTTAGTGGGTCTCTCCTGTCTTTTTGCGAGCTCGGTGAGGTACCAGACCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTGGGTCTCTCCTGTCTTTTTGCGAGCTCGGTGAGGTACCAGACCA  899

seq1  CCCTGCCTGTCCTTTCTGTCACCTTACAGCCTCACAGCTGGGCTCTCAG-  948
      ||||| ||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCCTGTCTGTCCTTTCTGTCACCTTACAGCCTCACAGCTGGGCTCTCAGA  949

seq1  AGTCACCCAAAGGGACATATATATCTCTGTTCAGACTTCTGGAACTCCTG  998
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGTCACCCAAAGGGACATATATATCTCTGTTCAGACCTCTGGAACTCCTG  999

seq1  AAGCTGGTTCAACCAG-TCTGATTTTTCTAA-CAATAGATGTTTTGCCTC  1046
      ||||| |||||| ||| |||||||||||||| ||||||||| |||| |||
seq2  AAGCT-GTTCAAACAGATCTGATTTTTCTAACCAATAGATG-TTTGGCTC  1047

seq1  TGTGTTGC  1054
      ||||||||
seq2  TGTGTTGC  1055