BAC Information

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BAC

Clone NameB6Ng01-183N13
Chromosome12 (Build37)
Map Location 63,121,131 - 63,121,275
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040300, LOC665677, Nanog-ps2, Lrfn5, LOC665699, LOC665707
Downstream geneLOC100040403, LOC665713, LOC622746, LOC100040438, 1700047L15Rik, Tspyl-ps, EG665741
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183N13.bB6Ng01-183N13.g
ACCGA009369GA009370
length9751,059
definitionB6Ng01-183N13.b B6Ng01-183N13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttatcttgcagagtgtgacagtggaggaatcagcaccctatag
gtaggcagtcatagtcatttgcacatctgttccaggaagtttccatttag
aggacttttctttggcgactaaaactgagacccttttcaattacatctga
tgtagttagaatttatagaaatcagcttgtacaaaagtaatcttctgcac
tctgactcagaccatttctattcttagaacttcttatatatcttcctgtc
catgggataaaagaggccctttattgggagatttttctcacctaagctca
tgtgacattacttttactcgagtcattccatggggataaaatagaatagc
agagtgtcaacacaatactcgaaacctaacttgacctcaggtactgcata
aggacttgacaggtactcctgctttgctttgccttatgtatgtttgtttg
tttgtttgtttgtttgtttgtttgttttgtgtgtttattcctgtgataaa
aatgtttaatatgaaatcttcttccttaatagaactttatttttaattag
atattttctttatttacattttcaatgttattccttttcctggtttcccc
tctgaaaacctctatccctccccccttcccctattcaccaacacccactc
tcacttccctgtcctagtattctattataatggggcattgagccttctca
ggaacaagggcctctcctcccattaatgtccaacaaggtcatcctctgct
acatatgcagctggagccatgggttcccttcaagtgtacaccttggttgg
tggtttagtccctgggagctctgacggtactgtttggttcatatttgtgg
ttccttctatggtgcttgcaagcttccttcagctcctttgatccttttcc
ttagctcctccatttggagacctttgtgcttcagcctaatgtttagctaa
ggagcatccactttctggtaatttg

gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcctcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaaatgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
ttcttcaggatctgttgttatgtctcccttttcatttctgattttgttaa
ttaggattttgtccctgtgccctttagtgagtctagctaagggtttatct
atcttgttgattttctcaaagaaccaactcctcgtttggttaattctttg
aatagttcttcttgtttccactttggttgatttcacccctgagttgatta
ttttcctgccgtctactccttcttgggtgaatttgcttcctttttttcta
gagcttttcatatgtgttgtcagctgctagtatgtgcctcttctcccgtt
tttttcttgaaggcactcatagctatggagtttccttctagaaatgcttt
catgtgtccaagtagggatacgttgtggcttcattttcataaactctgaa
aaaggtctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_63121131_63121275
seq2: B6Ng01-183N13.b_505_667 (reverse)

seq1  GGGATATGAGGTTTTCTGAGGGGAAACCAGGCAAGGGGATACCATCTGAC  50
      |||||| ||||||||| |||||||||||||| || || ||| |||   | 
seq2  GGGATA-GAGGTTTTCAGAGGGGAAACCAGGAAAAGGAATAACATTGAAA  49

seq1  CTGTAAATAAA-AAAATATCTAATAAAAAACATTTGAAATATAAATAAAG  99
       |||||||||| |||||||||||| ||||| |   |   ||| ||  |||
seq2  ATGTAAATAAAGAAAATATCTAATTAAAAATA-AAGTTCTATTAAGGAAG  98

seq1  AAAATATCCAATGAAATA------------GAA-------ACAAAACAAA  130
      || || ||  || ||| |            |||       ||||||||||
seq2  AAGATTTCATATTAAACATTTTTATCACAGGAATAAACACACAAAACAAA  148

seq1  CAAACAAACAAACAA  145
      |||||||||||||||
seq2  CAAACAAACAAACAA  163


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