MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-189L10
Chromosome	12 (Build37)	4 (Build37)
Map Location	52,536,456 - 52,537,643	83,160,972 - 83,161,880
singlet/doublet	singlet	singlet
Overlap gene	Scfd1
Upstream gene	Prkcm, LOC100039517, LOC636070, LOC100039525, 6030408C04Rik, LOC620390
Downstream gene	LOC100039578, Coch, Strn3, Ap4s1, Hectd1, EG544864, LOC100039476, Heatr5a, LOC676784, 6530401N04Rik, Gpr33, LOC100039627, Nubpl
Link	Open Mouse BAC browser

Click to get alignment info.

name	Prkcm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18760 MGI:99879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039517 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039517
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins

name	LOC636070 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:636070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 31 mRNAs, 729 ESTs, 70 Proteins pseudo : _no_value

name	LOC100039525 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039525
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 59 ESTs, 6 Proteins

name	6030408C04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217558 MGI:2444298
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scfd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76983 MGI:1924233
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620390 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620390
definition	note : high mobility group protein 1 pseudogene pseudo : _no_value

name	LOC100039578 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039578
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Coch (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12810 MGI:1278313
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Strn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94186 MGI:2151064
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ap4s1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11782 MGI:1337065
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hectd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207304 MGI:2384768
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 244 ESTs, 5 Proteins

name	EG544864 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:544864 MGI:3643232
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs

name	LOC100039476 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039476
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Heatr5a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320487 MGI:2444133
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC676784 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676784
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	6530401N04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328092 MGI:1923485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr33 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14762 MGI:1277106
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039627 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039627
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 ESTs, 5 Proteins

name	Nubpl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76826 MGI:1924076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prkcm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802717 GeneID:18760 MGI:99879
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C, mu transcript_id : NM_008858.2

name	LOC100039517 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263234 GeneID:100039517
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins product : similar to Ubtf protein transcript_id : XM_001473036.1

name	LOC100039525 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263236 GeneID:100039525
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 59 ESTs, 6 Proteins product : similar to ribosomal protein S11 transcript_id : XM_001473056.1

name	6030408C04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62821812 GeneID:217558 MGI:2444298
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6030408C04 gene transcript_id : NM_001015099.1

name	Scfd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802288 GeneID:76983 MGI:1924233
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sec1 family domain containing 1 transcript_id : NM_029825.2

name	Coch (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354323 GeneID:12810 MGI:1278313
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coagulation factor C homolog (Limulus polyphemus) transcript_id : NM_007728.3

name	Strn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16418468 GeneID:94186 MGI:2151064
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : striatin, calmodulin binding protein 3 transcript_id : NM_052973.1

name	Ap4s1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893151 GeneID:11782 MGI:1337065
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adaptor-related protein complex AP-4, sigma 1 transcript_id : NM_021710.2

name	Hectd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263230 GeneID:207304 MGI:2384768
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 244 ESTs, 5 Proteins product : HECT domain containing 1 transcript_id : XM_974905.2

name	EG544864 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392843 GeneID:544864 MGI:3643232
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs product : predicted gene, EG544864 transcript_id : XM_974939.1

name	LOC100039476 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263232 GeneID:100039476
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039476 transcript_id : XM_001472868.1

name	Heatr5a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130348 GeneID:320487 MGI:2444133
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HEAT repeat containing 5A transcript_id : NM_177171.4

name	6530401N04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384131 GeneID:328092 MGI:1923485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6530401N04 gene transcript_id : NM_029545.2

name	Gpr33 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33469078 GeneID:14762 MGI:1277106
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 33 transcript_id : NM_008159.1

name	LOC100039627 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263238 GeneID:100039627
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 ESTs, 5 Proteins product : similar to CD79A antigen (immunoglobulin-associated alpha) transcript_id : XM_001473232.1

name	Nubpl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110626046 GeneID:76826 MGI:1924076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleotide binding protein-like transcript_id : NM_029760.1

name	Prkcm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679351 GeneID:18760 MGI:99879
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : protein kinase C, mu protein_id : NP_032884.1

name	LOC100039517 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263235 GeneID:100039517
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473086.1

name	LOC100039525 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263237 GeneID:100039525
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473106.1

name	6030408C04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62821813 CCDS:CCDS25900.1 GeneID:217558 MGI:2444298
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC217558 protein_id : NP_001015099.1

name	Scfd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037481 GeneID:76983 MGI:1924233
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006904 - vesicle docking during exocytosis [Evidence IEA]; GO:0016192 - vesicle-mediated transport [Evidence IEA] codon_start : 1 product : sec1 family domain containing 1 protein_id : NP_084101.1

name	Coch (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680956 CCDS:CCDS25901.1 GeneID:12810 MGI:1278313
definition	GO_process : GO:0007596 - blood coagulation [Evidence IEA] codon_start : 1 product : coagulation factor C homolog (Limulus polyphemus) protein_id : NP_031754.1

name	Strn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16418469 GeneID:94186 MGI:2151064
definition	GO_function : GO:0005516 - calmodulin binding [Evidence IEA] codon_start : 1 note : SG2NA beta isoform; nuclear autoantigen product : striatin, calmodulin binding protein 3 protein_id : NP_443205.1

name	Ap4s1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17998681 GeneID:11782 MGI:1337065
definition	GO_component : GO:0005905 - coated pit [Evidence IEA]; GO:0030662 - coated vesicle membrane [Evidence IEA]; GO:0005802 - Golgi trans face [Evidence TAS] GO_process : GO:0006886 - intracellular protein transport [Evidence TAS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0016192 - vesicle-mediated transport [Evidence TAS] codon_start : 1 product : adaptor-related protein complex AP-4, sigma 1 protein_id : NP_068356.1

name	Hectd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263231 GeneID:207304 MGI:2384768
definition	codon_start : 1 product : HECT domain containing 1 protein_id : XP_979999.2

name	EG544864 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392844 GeneID:544864 MGI:3643232
definition	codon_start : 1 product : hypothetical protein protein_id : XP_980033.1

name	LOC100039476 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263233 GeneID:100039476
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472918.1

name	Heatr5a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38505263 CCDS:CCDS25902.1 GeneID:320487 MGI:2444133
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC320487 protein_id : NP_796145.2

name	6530401N04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31324532 CCDS:CCDS25903.1 GeneID:328092 MGI:1923485
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA] GO_process : GO:0019478 - D-amino acid catabolism [Evidence IEA] codon_start : 1 product : hypothetical protein LOC328092 protein_id : NP_083821.1

name	Gpr33 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33469079 CCDS:CCDS25904.1 GeneID:14762 MGI:1277106
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004982 - N-formyl peptide receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 33 protein_id : NP_032185.1

name	LOC100039627 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263239 GeneID:100039627
definition	codon_start : 1 product : similar to CD79A antigen (immunoglobulin-associated alpha) protein_id : XP_001473282.1

name	Nubpl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110626047 GeneID:76826 MGI:1924076
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : nucleotide binding protein-like protein_id : NP_084036.1

name	LOC100039578 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039578
definition	number : 1 pseudo : _no_value

name	LOC676784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676784
definition	number : 1 pseudo : _no_value

name	LOC676784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676784
definition	number : 2 pseudo : _no_value

name	LOC636070 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263227 GeneID:636070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 31 mRNAs, 729 ESTs, 70 Proteins product : similar to hCG1992406 pseudo : _no_value transcript_id : XR_030785.1

clone name	MSMg01-312M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473K05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-435C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512O14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-496B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529F11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-170H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271E03
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-189L10.b	B6Ng01-189L10.g
ACC	GA013660	GA013661
length	1,211	799
definition	B6Ng01-189L10.b	B6Ng01-189L10.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(52,536,456 - 52,537,643)	(83,160,972 - 83,161,880)
sequence	gaattctcctatttatataactcttctgccactgtcagaaccatagtatt agcaaggaggttgtgtggatacagctttcaatgtcagtttttccagatga gtattcatctctgattactccaacccacactgtaaattcctagcattaag aatgtacttaagagtcaaagggtatggacatttgtagttattctaataaa tattgccaaattgttctccagtgtaaagtctctctagtctagaaatgcat attaaactcatagaagccattgtgacattgtactgtcctgatacccaaat atctaggggcactcgcactatggagttctagggaaattcgggaagaatca tcaaaaagaccgagcagatacaaacataggatcctgtagtttatactgct cacatctataaaggattgtttggctttttaattttttaaatttacattcg gggacatacgtggaattggctctctctttccacctttatctggattccag gagtggaactcgggtcactaagcaccttttcttgcttgaggcttttcatt ggcactattaagattaactaattggacaagaattaaactagtcagtaaat taaaaaaggatagaattagcagtgttcagttctctaggttacttataaga gcctttgtattttgttttatgggcagcatgagttttctgcatcttaagta tcaaccttcacatagccagttgagtgatatttacagacttgaatcaattc gtgtaagcataattatacaaaaatatgattatgataaaagcatgaagttg cataatttagaaatccccactgtctttgactcatctacgagagcaatttg tctttaaaaaaagaaatttattaataaataaaatacaaccaattaaaacc aatttaagtttgtcctggaagaacaaaacttgattgccatgtgtgatctc tatttaggatttattatttgtaagaaaactaaaaaatattgtgcaacaga aaatttgaacttctgaattattattattaataaaccaatttcacagttat taaaataagacaatcattgcactatataatttgtacattaacagcctaaa atgtcagcaatacgtaagtaaaatgagcaaggagtggaagaataattgct gatggtttcctccttaagccaagttacattcggagatctactgataattc gtgggtctgtc	gaattctttgctaagttttgatatggaagacatctagatgtgagactgag aactgaagtctctcgttataattgtgtctggacttacatgacattttatg tctttagtgtttgttttataaaattagaggccccaaaacttgatgtataa atattacaatgttcataaatgcttaatgattgtctctttttaatatatgg tttcctcgtttatctctctgactagtgtagctgctctttgctactttatg agttctttttcccaccctttttcccccaggtttcatcccctagataggag agaaacaaggatagaggggagagaggaattaggaaaacccctgaatctaa tctctctctctctctctctctctctttctctctctctctctcacacacac acacacacacacacacacacacaccctctccctccctccctccctccctc cctctcttttttcttttctttttctttttctttttttttttgaaacaggg tttctctgtatagccctggctgtccaggaactcactttgtagaccaggat gacctcgaactcagaaatctgcctgcctctgcctcccaagtgctaggatt aaaaggcgtgcgccaccacacccgacttccttcttccttccttccttcct tcctttctttctttctttctttctttctttctttctttctttctttcttt ctttctttctttctatctctcttttctttctttcactctttctttctttc gctctctctttctttctttctttctttctttcttttctttctttctttt
quality values	Open. Hide. 41 31 34 26 58 58 62 62 62 62 52 62 62 54 56 62 56 62 62 62 62 62 62 62 62 62 62 49 62 44 34 59 34 44 17 26 11 13 36 23 27 23 21 28 27 25 23 56 59 59 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 59 49 39 35 48 54 46 46 46 50 59 56 54 54 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 56 62 62 62 49 56 62 62 62 62 56 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 54 54 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 58 58 58 58 58 52 58 58 58 36 54 54 58 58 54 58 42 58 58 52 58 54 58 52 58 54 58 54 42 54 58 58 58 54 54 58 48 50 54 48 46 52 52 48 44 54 54 54 58 54 58 54 54 54 54 54 54 54 44 43 58 54 58 52 54 58 58 47 38 58 58 58 54 54 58 54 51 58 58 47 49 58 50 58 51 47 49 42 54 58 53 58 54 51 48 58 49 58 50 52 47 42 50 52 31 58 52 58 39 45 52 53 58 58 50 41 46 53 54 51 49 32 23 51 58 40 46 39 54 49 49 46 53 53 49 39 35 58 51 53 58 58 58 52 58 51 58 41 29 40 50 39 35 49 51 50 33 40 51 53 51 50 33 58 40 58 53 38 52 33 53 40 52 52 52 32 53 42 58 50 58 42 53 53 50 37 50 39 58 52 42 53 32 39 51 25 26 58 52 52 49 41 38 20 41 49 38 51 37 29 54 34 29 26 32 53 32 54 33 39 22 54 52 53 26 54 29 54 54 54 39 53 37 46 53 28 18 54 39 39 37 45 37 33 54 54 39 26 27 29 44 37 33 31 34 40 35 33 32 32 40 20 31 30 54 34 31 15 53 54 31 34 36 54 54 37 28 38 34 45 28 41 42 52 47 32 32 28 32 53 29 40 41 40 30 34 21 27 8 38 21 33 26 29 34 49 24 42 25 32 51 40 36 24 34 37 32 40 47 25 27 23 40 31 30 51 12 17 34 33 31 22 30 10 46 26 30 31 51 30 29 14 15 30 26 24 42 33 13 43 31 42 43 51 51 30 29 46 14 40 26 51 16 33 20 18 7 31 18 29 18 15 25 19 24 19 23 32 14 13 28 16 22 46 46 22 33 23 26 30 34 23 16 31 20 31 10 11 27 21 31 19 31 30 24 21 11 37 32 36 41 46 20 21 9 11 6 6 21 20 29 31 39 36 24 46 23 25 13 36 38 33 43 39 41 21 19 19 7 46 46 46 39 9 11 26 11 12 13 9 26 20 25 13 20 15 16 36 47 48 32 23 48 37 37 18 18 20 11 5 6 18 18 15 19 13 6 7 20 18 11 7 17 21 6 5 20 21 9 6 38 22 19 34 8 11 28 39 26 6 5 8 20 12 6 5 12 9 5 5 31 39 21 34 10 7 6 13 6 7 14 22 17 22 11 11 32 17 13 32 10 9 7 6 10 10 5 6 28 5 8 5 4 8 9 25 10 13 10 28 20 9 12 11 6 11 29 32 12 17 27 14 11 10 5 6 4 7 13 10 16 3 3 3 12 8 8 10 31 38 15 6 6 7 5 8 10 6 17 3 3 4 5 11 15 7 5 3 7 24 9 6 20 16 5 9 5 15 15 22 12 13 7 2 29 19 5 15 7 3 8 5 4 7 7 2 3 6 4 7 5 5 11 5 3 4 12 6 1 4 3 5 4 6 2 3 7 13 14 5 2 5 3 8 4 6 5 6 5 6 4 8 13 8 23 4 7 5 7	Open. Hide. 62 47 39 37 62 62 62 62 62 62 51 18 10 11 11 11 15 20 21 22 28 26 34 21 32 34 56 62 62 59 51 62 59 62 59 62 62 59 59 62 62 62 62 62 59 59 62 62 59 54 54 62 59 62 62 59 62 30 43 43 34 36 43 56 34 32 28 48 48 31 43 54 62 62 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 54 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 56 48 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 56 59 59 56 56 59 56 62 59 59 59 62 59 62 59 59 59 62 54 62 62 62 62 59 59 59 59 51 49 56 51 51 46 48 59 62 54 56 48 48 56 50 50 50 59 59 56 48 48 50 56 50 46 46 50 46 43 43 45 43 43 45 50 38 44 45 37 29 34 24 43 45 50 59 59 59 51 51 56 50 50 51 51 44 50 50 51 51 59 43 50 45 45 43 43 51 44 43 56 59 62 56 62 59 51 50 62 59 44 44 56 59 51 51 24 28 16 10 14 15 22 15 41 38 39 51 38 24 38 51 32 42 39 50 51 38 56 47 51 42 38 31 27 38 51 42 44 20 31 25 38 26 30 51 27 56 47 37 56 62 37 31 39 39 18 37 42 42 51 39 38 31 33 24 18 13 14 20 56 50 50 56 62 56 56 47 47 38 56 15 20 11 15 9 14 32 56 46 34 56 27 37 42 39 31 56 22 37 30 43 43 20 26 62 27 43 42 56 50 42 33 26 17 22 35 42 42 52 52 38 52 43 62 33 42 52 15 13 15 14 18 14 43 52 45 38 44 52 41 43 43 43 52 40 36 34 39 35 34 40 35 35 35 43 39 33 33 30 28 25 28 22 35 39 35 34 34 28 28 20 20 11 18 22 20 25 12 9 26 18 17 22 21 12 13 10 17 14 9 18 19 19 15 22 22 13 13 20 24 23 13 16 19 15 21 23 23 22 15 26 19 10 7 30 30 30 30 30 31 19 19 13 27 29 19 17 16 33 33 14 14 22 10 22 21 27 16 18 27 25 17 13 19 19 15 13 16 17 4 9 17 27 13 20 13 14 9 13 17 14 12 19 16 19 35 15 24 28 32 19 27 24 25 33 23 18 15 18 16 21 14 24 30 12 13 16 21 23 16 13 9 24 16 6 15 19 16

Alignment Information

BAC End 1

BAC End 2

seq1: chr12_52536456_52537643
seq2: B6Ng01-189L10.b_50_1260

seq1  GAATTCTCCTATTTATATAACTCTTCTGCCACTGTCAGAACCATAGTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTATTTATATAACTCTTCTGCCACTGTCAGAACCATAGTATT  50

seq1  AGCAAGGAGGTTGTGTGGATACAGCTTTCAATGTCAGTTTTTCCAGATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGAGGTTGTGTGGATACAGCTTTCAATGTCAGTTTTTCCAGATGA  100

seq1  GTATTCATCTCTGATTACTCCAACCCACACTGTAAATTCCTAGCATTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCATCTCTGATTACTCCAACCCACACTGTAAATTCCTAGCATTAAG  150

seq1  AATGTACTTAAGAGTCAAAGGGTATGGACATTTGTAGTTATTCTAATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACTTAAGAGTCAAAGGGTATGGACATTTGTAGTTATTCTAATAAA  200

seq1  TATTGCCAAATTGTTCTCCAGTGTAAAGTCTCTCTAGTCTAGAAATGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCCAAATTGTTCTCCAGTGTAAAGTCTCTCTAGTCTAGAAATGCAT  250

seq1  ATTAAACTCATAGAAGCCATTGTGACATTGTACTGTCCTGATACCCAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACTCATAGAAGCCATTGTGACATTGTACTGTCCTGATACCCAAAT  300

seq1  ATCTAGGGGCACTCGCACTATGGAGTTCTAGGGAAATTCGGGAAGAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGGGCACTCGCACTATGGAGTTCTAGGGAAATTCGGGAAGAATCA  350

seq1  TCAAAAAGACCGAGCAGATACAAACATAGGATCCTGTAGTTTATACTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAGACCGAGCAGATACAAACATAGGATCCTGTAGTTTATACTGCT  400

seq1  CACATCTATAAAGGATTGTTTGGCTTTTTAATTTTTTAAATTTACATTCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTATAAAGGATTGTTTGGCTTTTTAATTTTTTAAATTTACATTCG  450

seq1  GGGACATACGTGGAATTGGCTCTCTCTTTCCACCTTTATCTGGATTCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACATACGTGGAATTGGCTCTCTCTTTCCACCTTTATCTGGATTCCAG  500

seq1  GAGTGGAACTCGGGTCACTAAGCACCTTTTCTTGCTTGAGGCTTTTCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGAACTCGGGTCACTAAGCACCTTTTCTTGCTTGAGGCTTTTCATT  550

seq1  GGCACTATTAAGATTAACTAATTGGACAAGAATTAAACTAGTCAGTAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTATTAAGATTAACTAATTGGACAAGAATTAAACTAGTCAGTAAAT  600

seq1  TAAAAAAGGATAGAATTAGCAGTGTTCAGTTCTCTAGGTTACTTATAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAGGATAGAATTAGCAGTGTTCAGTTCTCTAGGTTACTTATAAGA  650

seq1  GCCTTTGTATTTTGTTTTATGGGCAGCATGAGTTTTCTGCATCTTAAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTGTATTTTGTTTTATGGGCAGCATGAGTTTTCTGCATCTTAAGTA  700

seq1  TCAACCTTCACATAGCCAGTTGAGTGATATTTACAGACTTGAATCAATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTTCACATAGCCAGTTGAGTGATATTTACAGACTTGAATCAATTC  750

seq1  GTGTAAGCATAATTATACAAAAATATGATTATGATAAAAGCATGAAGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGCATAATTATACAAAAATATGATTATGATAAAAGCATGAAGTTG  800

seq1  CATAATTTAGAAATCCCCACTGTCTTTGACTCATCTACGAGAGCAATTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTTAGAAATCCCCACTGTCTTTGACTCATCTACGAGAGCAATTTG  850

seq1  TCTTTAAAAAAAGAAA-TTATTAATAAATAAAATACAACCAATTAAAACC  899
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCTTTAAAAAAAGAAATTTATTAATAAATAAAATACAACCAATTAAAACC  900

seq1  AA-TTAAG-TTGTCCTGGAAGA--CAAACTTGATTGCCATGTGTGATCTC  945
      || ||||| |||||||||||||   |||||||||||||||||||||||||
seq2  AATTTAAGTTTGTCCTGGAAGAACAAAACTTGATTGCCATGTGTGATCTC  950

seq1  TATTTAGGA-TTATTATTTGTAAGAAAACT-AAAAATAATGTGCAACAGA  993
      ||||||||| |||||||||||||||||||| ||||||| |||||||||||
seq2  TATTTAGGATTTATTATTTGTAAGAAAACTAAAAAATATTGTGCAACAGA  1000

seq1  AAATTTGAAC-TCTGAA-TATTAT--ATAATAA--CCATTTCACAG-TAT  1036
      |||||||||| |||||| ||||||   ||||||  | ||||||||| |||
seq2  AAATTTGAACTTCTGAATTATTATTATTAATAAACCAATTTCACAGTTAT  1050

seq1  --AAAT-AGAC-ATCATTGCACTATA----TTGTACATTAACAGCCT-AA  1077
        |||| |||| ||||||||||||||    ||||||||||||||||| ||
seq2  TAAAATAAGACAATCATTGCACTATATAATTTGTACATTAACAGCCTAAA  1100

seq1  ATGTCAAGCATACGTTAGTAAAATGAGC-AGGAGTGG-AGATAATTTGTT  1125
      ||||||   |||||| |||||||||||| |||||||| |||  | ||| |
seq2  ATGTCAGCAATACGTAAGTAAAATGAGCAAGGAGTGGAAGAATAATTGCT  1150

seq1  GATGGGTTTCCTTCTAAAGCCCAGTTACATTTGGGAGATCTACTGAAATA  1175
      ||| |||||||| || ||||| ||||||| || ||||||||||||| |  
seq2  GAT-GGTTTCCTCCTTAAGCCAAGTTACA-TTCGGAGATCTACTGATAAT  1198

seq1  TCTGTGGTCTGTC  1188
      ||   ||||||||
seq2  TCGTGGGTCTGTC  1211

seq1: chr4_83160972_83161880
seq2: B6Ng01-189L10.g_542_865 (reverse)

seq1  AAAAGAAAGAAAGAAAAGAATGGGGCTGGAGAGATGGCTCAGCAGTTAAG  50
                                                        
seq2  --------------------------------------------------  0

seq1  AGCATGCATTGTGTATCTGTAAGGACCCAAGTTCAATTCCTGGCACCCAT  100
                                                        
seq2  --------------------------------------------------  0

seq1  ATCAGGCCACTCACAACTGCCTGCAGCTGCAGCTCCAAGGGTTCTGATCC  150
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTGGTCTCTGTGGGTACCTACACATCCGTGGCACACACACATCCATCT  200
                                                        
seq2  --------------------------------------------------  0

seq1  AGATATGATTAAAAATAAAATAAATCTTAAAAAAAAAAAGGTCTAAAAAA  250
                                                        
seq2  --------------------------------------------------  0

seq1  GGTGGAGTGTGGTAGAGGAATACAGACATCAGCCTCCCTCCACCTTGGAT  300
                                                        
seq2  --------------------------------------------------  0

seq1  GTGCACATGTGCCTGCATATACATGCACACGCACACGCACGCACACGCGC  350
                                                        
seq2  --------------------------------------------------  0

seq1  ACACACACACACACGCGCACACACACACACACACACACACACAGAGGCTT  400
                                                        
seq2  --------------------------------------------------  0

seq1  GGAGCTCAGTCTTCCTGCTGTTGTGTCCTGCAGCATCACTCCAGTGCCCT  450
                                                        
seq2  --------------------------------------------------  0

seq1  CTGCTGATGAACAATAACATCTCATCCAGGAGAGAAAAGAAAGAAAGAAA  500
                   | || |        | || ||||||||||||||||||
seq2  -------------AAAAGA--------AAGAAAGAAAAGAAAGAAAGAAA  29

seq1  CAATCCTCAGATTCAGTGCTAGACTGGCAAATCAGGGCAAAAGGGATAGA  550
       ||     |||         |||     ||   || || |||  || |||
seq2  GAA-----AGA--------AAGA-----AAGAGAGAGCGAAA--GAAAGA  59

seq1  TTCATAACAACAATATTAAATTAATTACCGGCATAGAAATTCAGGACTAT  600
                 || | | ||  ||          |||||   ||    ||
seq2  -----------AAGAGTGAAAGAA----------AGAAA---AGAGAGAT  85

seq1  AGAAAGATACATATACTTTCATTTTTCTCCTAAATGTGTTCCCACCACAG  650
      ||||||| | |                                       
seq2  AGAAAGAAAGA---------------------------------------  96

seq1  TTTTAAGTTAATTAAAAGGCCAGGGCAATACAGAGAAACCCTGTTTCAAA  700
          |||       ||||         | | | |||||          ||
seq2  ----AAG-------AAAG---------AAAGAAAGAAA---------GAA  117

seq1  AAAAAAAAAAAAAGAA--AAAAAAAGAAAGAAAGAAAGAAAGAAAG--AA  746
      | ||| ||| ||||||  ||| |||||||| ||| ||| ||| |||  | 
seq2  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAG  167

seq1  AAGAAAGCCAGGCGTGGTGGCGCACGCC-TTTAATCCCAGCACTCGGGAG  795
      ||| ||| | || ||||||||||||||| |||||||| |||||| |||||
seq2  AAGGAAGTCGGGTGTGGTGGCGCACGCCTTTTAATCCTAGCACTTGGGAG  217

seq1  GCAGAGGCAGGCAGATTTTTGAGTTCGAGGCCAGCCTGGTCTACAAAGTG  845
      |||||||||||||||||| ||||||||||| || ||||||||||||||||
seq2  GCAGAGGCAGGCAGATTTCTGAGTTCGAGGTCATCCTGGTCTACAAAGTG  267

seq1  AGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACAA  895
      |||||| ||||||||||||||| ||||||||||||||| |       |||
seq2  AGTTCCTGGACAGCCAGGGCTATACAGAGAAACCCTGTTT-------CAA  310

seq1  AAAACAAAACAAAA  909
      |||| |||| ||||
seq2  AAAAAAAAAGAAAA  324

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Alignment Information