BAC Information

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BAC

Clone NameB6Ng01-189N20
Chromosome12 (Build37)
Map Location 97,775,822 - 97,776,953
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667688, Flrt2, 1700019M22Rik, LOC100039664
Downstream geneEG628277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189N20.bB6Ng01-189N20.g
ACCGA013771GA013772
length1,1251,170
definitionB6Ng01-189N20.b B6Ng01-189N20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgtaaaataacaccaatatcctgagttcattagagctaaggta
gataactgtatacaaaatattaggaccccataagcaactaatccaatggt
tattcatattaagtgattctccatgtctttaagatggtatcatcagaatt
tttagtcattacatttttagcagaattctctgtgttctataaagtttctg
tggtgttctacaagcctacaagaacattaccaaaagcagatgtgctgtgg
gatgaagccatcattcaggcgtgtggaatgtccaaaactccctgtcactt
tttggcactgagaactaaatgtctgctctcatatctcaattcaaaggcat
aaatgtttatcagcagagacatattataaatagttcactgaaatctcaaa
atcgcagcacatagaaaaatatttgggtccaaagaaaacatagacatcaa
ttctatatttttattttaatctataagcagaatggaaaatagttttaagt
cacattaagatttgtttgaaataatgaaaactatattaaaagattctcaa
tattaaaaaattttagatggtaaagccagctgtgctatggtaaattgtta
ttagtgatttcaagtcatatctaaaactatacatttaacttcaaactata
gccaaagtatacgaatttttaagttctatgtgtttttactgttcatagcc
cttttgctttggtcctcttatgtgggcttaattgatagttataaacatat
ttttaaggaaaatatagccaaaccaatattttatgagtgtatcttggaaa
gtatagtatttcaaaaaactatcatctatgttgcctaagaaccatcaaaa
aaaaaaactcttatcatttaatattgactttaaatttctattaaaataaa
gccatgtaatattgtaatgattcagaactcccttggaggaaggtgattat
tatttttttttttaaatttctttccctagaattgaatttcttttcttttc
ttacattaaggaacacaataaatataatgagataagacatcaatcacatt
gaattggacagataatccacagaattgagatgacacaaaggaagcacaga
gtctcagcctgtggctcacccatga

gaattctttgtttatctctgttgcccattttttaatgggttatttgattt
tctggaatccagcttcttgagttctttatatatattggatattagtcccc
tatctgatttaggattggtaaagatcctttcccaatctgttggtcacctt
tttgtcctattgacagtgtcttttgccttacagaagctttgcaattttat
ggtagaccaatggaatacaattgaagactcagaaatgcacccacacaccc
atgatcacttgatctttcacaagggagataaaaccatccagtgaaaaaaa
agacagcattttcaacaaatggtgctggcacaaaggcagttatcatgtag
aagaatgcaaattgatccattcttatctccttgtactaagatcaagtcta
agtggttcaaggaacctcagataaaaccagagacactaaaacttatagag
gagaaagttgggaagtgccttgaatatatggacacagtgggaagattcct
gaacagaacagcaatggtttatgctgtaagatcagcttgctttcttgtag
cgcccaggactaccagcccagagatggtaccacccacaaggggccctccc
catttgatcactaattgaggaattgctctataactgtatctcatggaggc
ctttcctcacctgaagctcctttctctgtgttaactccagcatgtgtcaa
gttgacacacaaaaccagccagtacaaacatcttaagtgcctaagtgaag
tggctggatacaaactaactccaaacaaagcaaaaacaaacaaacacaaa
caaaaattaaacaaataatcagtatcccttctttatacaaacaaaaaaaa
atggggctgagaaagaaatttagtgagtccataccctttcacaatgccct
agaaataatttaaaacatctctttatatctctaacaagcaagtgaaagac
tagtacgacagaatcttcagtatttttaagaaaataaattgaagaagata
tcagaatattgaatgattcttcaatgctcatggaccattagatttacata
gtaaaacatgtccaaaaaataattctaagaacatttcattgccaattccg
tccaaatcagaacaactcttaccagatcttaaaaacaaatcctggttacc
aggttaaaaggagaactatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_97775822_97776953
seq2: B6Ng01-189N20.b_49_1173

seq1  GAATTCTTGTAAAATAACACCAATATCCTGAGTTCATTAGAGCTAAGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTAAAATAACACCAATATCCTGAGTTCATTAGAGCTAAGGTA  50

seq1  GATAACTGTATACAAAATATTAGGACCCCATAAGCAACTAATCCAATGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACTGTATACAAAATATTAGGACCCCATAAGCAACTAATCCAATGGT  100

seq1  TATTCATATTAAGTGATTCTCCATGTCTTTAAGATGGTATCATCAGAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATATTAAGTGATTCTCCATGTCTTTAAGATGGTATCATCAGAATT  150

seq1  TTTAGTCATTACATTTTTAGCAGAATTCTCTGTGTTCTATAAAGTTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCATTACATTTTTAGCAGAATTCTCTGTGTTCTATAAAGTTTCTG  200

seq1  TGGTGTTCTACAAGCCTACAAGAACATTACCAAAAGCAGATGTGCTGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTCTACAAGCCTACAAGAACATTACCAAAAGCAGATGTGCTGTGG  250

seq1  GATGAAGCCATCATTCAGGCGTGTGGAATGTCCAAAACTCCCTGTCACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGCCATCATTCAGGCGTGTGGAATGTCCAAAACTCCCTGTCACTT  300

seq1  TTTGGCACTGAGAACTAAATGTCTGCTCTCATATCTCAATTCAAAGGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCACTGAGAACTAAATGTCTGCTCTCATATCTCAATTCAAAGGCAT  350

seq1  AAATGTTTATCAGCAGAGACATATTATAAATAGTTCACTGAAATCTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTATCAGCAGAGACATATTATAAATAGTTCACTGAAATCTCAAA  400

seq1  ATCGCAGCACATAGAAAAATATTTGGGTCCAAAGAAAACATAGACATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCAGCACATAGAAAAATATTTGGGTCCAAAGAAAACATAGACATCAA  450

seq1  TTCTATATTTTTATTTTAATCTATAAGCAGAATGGAAAATAGTTTTAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATTTTTATTTTAATCTATAAGCAGAATGGAAAATAGTTTTAAGT  500

seq1  CACATTAAGATTTGTTTGAAATAATGAAAACTATATTAAAAGATTCTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTAAGATTTGTTTGAAATAATGAAAACTATATTAAAAGATTCTCAA  550

seq1  TATTAAAAAATTTTAGATGGTAAAGCCAGCTGTGCTATGGTAAATTGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAAAATTTTAGATGGTAAAGCCAGCTGTGCTATGGTAAATTGTTA  600

seq1  TTAGTGATTTCAAGTCATATCTAAAACTATACATTTAACTTCAAACTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGATTTCAAGTCATATCTAAAACTATACATTTAACTTCAAACTATA  650

seq1  GCCAAAGTATACGAATTTTTAAGTTCTATGTGTTTTTACTGTTCATAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAGTATACGAATTTTTAAGTTCTATGTGTTTTTACTGTTCATAGCC  700

seq1  CTTTTGCTTTGGTCCTCTTATGTGGGCTTAATTGATAGTTATAAACATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCTTTGGTCCTCTTATGTGGGCTTAATTGATAGTTATAAACATAT  750

seq1  TTTTAAGGAAAATATAGCCAAACCAATATTTTATGAGTGTATCTTGGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGGAAAATATAGCCAAACCAATATTTTATGAGTGTATCTTGGAAA  800

seq1  GTATAGTATTTCAAAAAACTATCATCTATGTTGCCTAAGAACCATC-AAA  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTATAGTATTTCAAAAAACTATCATCTATGTTGCCTAAGAACCATCAAAA  850

seq1  AAAAAAACTCTTATCATTTAATATTGACTTTAAATTTCTATTAAAATAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACTCTTATCATTTAATATTGACTTTAAATTTCTATTAAAATAAA  900

seq1  GCCATGTAATATTGTAATGATTCAGAACTCCC-TGGAGGAAGGTGATTAT  948
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCCATGTAATATTGTAATGATTCAGAACTCCCTTGGAGGAAGGTGATTAT  950

seq1  TA--TTTTTTTTTAAATTTCTTTCCCTAGAAATTTAAATTTTCTTTTC-T  995
      ||  |||||||||||||||||||||||||||  || || ||||||||| |
seq2  TATTTTTTTTTTTAAATTTCTTTCCCTAGAA--TTGAA-TTTCTTTTCTT  997

seq1  TTCTTACATAAAAAAACACAATAAAATATAATGAGATAAGACAATCCATC  1045
      ||||||||| ||  |||||||| ||||||||||||||||||| ||| |||
seq2  TTCTTACATTAAGGAACACAAT-AAATATAATGAGATAAGAC-ATCAATC  1045

seq1  ACATTGAAATTGGACAAGATAAACCAACAGAAAATGAGAAGAACACAAAA  1095
      |||||| |||||||| |||||| || |||| || ||||| | ||||||| 
seq2  ACATTG-AATTGGAC-AGATAATCC-ACAG-AATTGAGATG-ACACAAAG  1090

seq1  GAAGGCACAGGAGTCTCCAGCTGTTGGTCACCCATGA  1132
      ||| ||||| |||||||   |||| | ||||||||||
seq2  GAA-GCACA-GAGTCTCAGCCTGTGGCTCACCCATGA  1125


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