BAC Information

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BAC

Clone NameB6Ng01-191H02
Chromosome12 (Build37)
Map Location 102,242,751 - 102,243,547
singlet/doubletsinglet
Overlap gene0610010D24Rik
Upstream geneKcnk13, Psmc1, BC002230, Calm1, Ttc7b, Rps6ka5, LOC100040123, 9030617O03Rik, EG667148, Gpr68
Downstream geneLOC100040184, Smek1, 4930463M05Rik, Mylf-ps, 4932415G16Rik, Mtac2d1, Fbln5, Trip11, Atxn3, LOC100040305, LOC100040297, Cpsf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191H02.bB6Ng01-191H02.g
ACCGA014933GA014934
length803309
definitionB6Ng01-191H02.b B6Ng01-191H02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggccagcccaagctctgtagtaagacccctttccctttctcg
ctgaggctgctataccttcctgggtcttactacataaacaaggctagctt
ggaattctccatcttcctgcagcccaagtgctagggttacaagcttatct
ttccacactctgctcctactgcatggatagttcattctgtcctgagaacg
aactattccctacagcacatctccacctctaagagaagtcaccacaggaa
ttttatttcagaagccaaatggtgcagagaaaaatgaagggcagagttct
gaaatcgatgcagatattcaggccatacaagatggtgcaggcctttcttt
agtcccagcacttgggaggcagatagacctctgtgagttccaggtcagcc
aggacatcacagtgagactctgactctcacacacacacacacacacacac
acacacacacacacacacacactccctccctccctccctcccccccccca
cccctctctgggtatggcccagggcaagcctctccacactccagggcctc
atttctcatcagtgagaaatgaggacaatacccaagccatctgcttcata
atttttaatgggctcttcgatgactggccttactctcttttgttttctcg
tatgacaaagctataatttaaaaagctaaatccatgtctgaaccaatgag
gcagcatgtacaaaccacagggcatgcgtgtgtgcccgcgcatacactca
cacacacacacacacacacacacacacacacaactttgaggtacacacag
ctc
ctatacccttcaggggctgcactccttcctattcttccaaaagagtccct
aaactctatccactgtttggctgtgggtgtctgatctgtttgagtcaggt
actgagtggactctctcagaggacagccatgttagattcctgtctgcaag
cataacagagtatcgtttacagtgtcagggatgggtgcttgttcatggga
cgggtctcaagttgggcctgttattggttggacattcccacagtctctgc
tccatttcctgtccctgcattttttttgtagccagcataaatttttgggg
ggggggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_102242751_102243547
seq2: B6Ng01-191H02.b_33_835

seq1  GAATTCCAGGCCAGCCCAAGCTCTGTAGTAAGACCCCTTTCCCTTTCTCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCCAGCCCAAGCTCTGTAGTAAGACCCCTTTCCCTTTCTCG  50

seq1  CTGAGGCTGCTATACCTTCCTGGGTCTTACTACATAAACAAGGCTAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCTGCTATACCTTCCTGGGTCTTACTACATAAACAAGGCTAGCTT  100

seq1  GGAATTCTCCATCTTCCTGCAGCCCAAGTGCTAGGGTTACAAGCTTATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCTCCATCTTCCTGCAGCCCAAGTGCTAGGGTTACAAGCTTATCT  150

seq1  TTCCACACTCTGCTCCTACTGCATGGATAGTTCATTCTGTCCTGAGAACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACACTCTGCTCCTACTGCATGGATAGTTCATTCTGTCCTGAGAACG  200

seq1  AACTATTCCCTACAGCACATCTCCACCTCTAAGAGAAGTCACCACAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTCCCTACAGCACATCTCCACCTCTAAGAGAAGTCACCACAGGAA  250

seq1  TTTTATTTCAGAAGCCAAATGGTGCAGAGAAAAATGAAGGGCAGAGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTCAGAAGCCAAATGGTGCAGAGAAAAATGAAGGGCAGAGTTCT  300

seq1  GAAATCGATGCAGATATTCAGGCCATACAAGATGGTGCAGGCCTTTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCGATGCAGATATTCAGGCCATACAAGATGGTGCAGGCCTTTCTTT  350

seq1  AGTCCCAGCACTTGGGAGGCAGATAGACCTCTGTGAGTTCCAGGTCAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCAGCACTTGGGAGGCAGATAGACCTCTGTGAGTTCCAGGTCAGCC  400

seq1  AGGACATCACAGTGAGACTCTGACTCTCACACACACACACACACACACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATCACAGTGAGACTCTGACTCTCACACACACACACACACACACAC  450

seq1  ACACACACACACACACACACACTCCCTCCCTCCCTCCCTCCCCCCCCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACTCCCTCCCTCCCTCCCTCCCCCCCCCCA  500

seq1  CCCCTCTCTGGGTATGGCCCAGGGCAAGCCTCTCCACACTCCAGGGCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTCTGGGTATGGCCCAGGGCAAGCCTCTCCACACTCCAGGGCCTC  550

seq1  ATTTCTCATCAGTGAGAAATGAGGACAATACCCAAGCCATCTGCTTCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCATCAGTGAGAAATGAGGACAATACCCAAGCCATCTGCTTCATA  600

seq1  ATTTTTAATGGGCTCTTCGATGACTGGCCTTACTCTCTTT--GTTTCTCG  648
      ||||||||||||||||||||||||||||||||||||||||   |||||||
seq2  ATTTTTAATGGGCTCTTCGATGACTGGCCTTACTCTCTTTTGTTTTCTCG  650

seq1  TATGACAAAGCTATAA-TTAAAAAGCT-AATCCATGTCTGAACCAATGAG  696
      |||||||||||||||| |||||||||| ||||||||||||||||||||||
seq2  TATGACAAAGCTATAATTTAAAAAGCTAAATCCATGTCTGAACCAATGAG  700

seq1  GCAGCATGTAC-AACCACA-GGCATGCGTGTGTGCCCGCGCATACACACA  744
      ||||||||||| ||||||| ||||||||||||||||||||||||||| ||
seq2  GCAGCATGTACAAACCACAGGGCATGCGTGTGTGCCCGCGCATACACTCA  750

seq1  CACACACACACACACACACACACACACACACAACTTTGAGGTACACACAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACAACTTTGAGGTACACACAG  800

seq1  CTC  797
      |||
seq2  CTC  803