BAC Information

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BAC

Clone NameB6Ng01-191L07
Chromosome12 (Build37)
Map Location 46,864,854 - 46,971,164
singlet/doubletdoublet
Overlap genenone
Upstream geneStxbp6
Downstream geneLOC664952, Nova1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191L07.bB6Ng01-191L07.g
ACCGA015131GA015132
length445998
definitionB6Ng01-191L07.b B6Ng01-191L07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,864,854 - 46,865,299)(46,970,636 - 46,971,164)
sequence
ccaagtccaaactaaaatcaaggtatagagattctaggggggaaatgcac
ctttatatgcttttctgcattgtatttatttggtatctttctgcctacaa
aataaacagcagccagtcaagactttattctgtccacccatcatgtcacc
cagacattacgtgattgaacttcccagacatttgctgcttgatcttcctt
tatttgattgctttgggcacatcagtgtaatacacaaatttattttaaga
ttaggtgggtggtgactaattctaccagctaccttaatgcaccatttgag
atgtaacctgtgtgtgtgtgtgtgtgtgtgtgtgtgtaggtatggatgta
gacattctctttcactggatatgtggcttaatctcttttgctagactgcc
tggttagggaaatggatatgcagagggagaaggatagtgagggag

gaattcatttaggatgagcatcctgagattcaagtctgtatctttgtgtg
atttccagttgtgtgtgatccaaagcattcatataacatattttcttagg
cccttaactttttgaatttgaataaactccataaagtccataaaggtttc
ccagcaagtttatgagttgaaatattttaattggcatattatgctttttc
atgccaaatacaacatattgcatatgtagtaacatttgatctcatatctg
aggaaaatattttaacttcaatgtataagagaattattatagttacccat
taatttttgaatacttacaagtactctgtcaattaacaacatccccagcc
acagtagaaaggctctccagactggatatttaagccatgatagtgagtac
accaatccctggccactagaccacccagaagctggctactgttaaagaaa
agtggtttaaattaaattcagcatactttcgaaattttggacaatagggc
ttcttaacaatttaccactcatggcctttttttggacaaagaatttgtgt
gcatctatagagatagaaaaaagtaagaatacaaagccaattttactaaa
ctagtaaggataataaaaatattttaaaacagttgcttgatataaaaata
gatttattatttattaaagttgaaagattatttggctgctgattagataa
atacatttgtttatgcttggattaataattaagtcttggctgaatgtttg
attctgtggacacagattacttttttttagtgatctttcagaattggtca
atatttttactttactaccatgaatgctgactacataaatttaccagagc
atgttgagtgcccttactgaagtttctggaagttctgttctaatcctaag
tgtaattcatttaacattttaaaatttgaagttcaagtaagcatcacaaa
tgttcaaaatcagatattctaacaaaataaatacaaaaatagttaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_46864854_46865299
seq2: B6Ng01-191L07.b_48_498

seq1  GAATTCCCAAGTCCAAACTAAAATCAAGGTATAGAGATTCTAGGGGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAGTCCAAACTAAAATCAAGGTATAGAGATTCTAGGGGGGAA  50

seq1  ATGCACCTTTATATGCTTTTCTGCATTGTATTTATTTGGTATCTTTCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACCTTTATATGCTTTTCTGCATTGTATTTATTTGGTATCTTTCTGC  100

seq1  CTACAAAATAAACAGCAGCCAGTCAAGACTTTATTCTGTCCACCCATCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAATAAACAGCAGCCAGTCAAGACTTTATTCTGTCCACCCATCAT  150

seq1  GTCACCCAGACATTACGTGATTGAACTTCCCAGACATTTGCTGCTTGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCCAGACATTACGTGATTGAACTTCCCAGACATTTGCTGCTTGATC  200

seq1  TTCCTTTATTTGATTGCTTTGGGCACATCAGTGTAATACACAAATTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTATTTGATTGCTTTGGGCACATCAGTGTAATACACAAATTTATT  250

seq1  TTAAGATTAGGTGGGTGGTGACTAATTCTACCAGCTACCTTAATGCACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATTAGGTGGGTGGTGACTAATTCTACCAGCTACCTTAATGCACCA  300

seq1  TTTGAGATGTAACCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGATGTAACCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGTATG  350

seq1  GATGTAGACATTCTCTTTCACTGGATATGTGGCTTAATCTCTTTTGCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAGACATTCTCTTTCACTGGATATGTGGCTTAATCTCTTTTGCTAG  400

seq1  ACTGCCTGG-GAGGGAAATGGAGATGCAGAGGGAGAAGGA----GAGGGA  445
      |||||||||  ||||||||||| |||||||||||||||||    ||||||
seq2  ACTGCCTGGTTAGGGAAATGGATATGCAGAGGGAGAAGGATAGTGAGGGA  450

seq1  G  446
      |
seq2  G  451


seq1: chr12_46970636_46971164
seq2: B6Ng01-191L07.g_64_592 (reverse)

seq1  AAAGGCCATGAGTGGTAAATTGTTAAGAAGCCCTATTGTCCAAAATTTCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCCATGAGTGGTAAATTGTTAAGAAGCCCTATTGTCCAAAATTTCG  50

seq1  AAAGTATGCTGAATTTAATTTAAACCACTTTTCTTTAACAGTAGCCAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATGCTGAATTTAATTTAAACCACTTTTCTTTAACAGTAGCCAGCT  100

seq1  TCTGGGTGGTCTAGTGGCCAGGGATTGGTGTACTCACTATCATGGCTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTGGTCTAGTGGCCAGGGATTGGTGTACTCACTATCATGGCTTAA  150

seq1  ATATCCAGTCTGGAGAGCCTTTCTACTGTGGCTGGGGATGTTGTTAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCAGTCTGGAGAGCCTTTCTACTGTGGCTGGGGATGTTGTTAATTG  200

seq1  ACAGAGTACTTGTAAGTATTCAAAAATTAATGGGTAACTATAATAATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTACTTGTAAGTATTCAAAAATTAATGGGTAACTATAATAATTCT  250

seq1  CTTATACATTGAAGTTAAAATATTTTCCTCAGATATGAGATCAAATGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATACATTGAAGTTAAAATATTTTCCTCAGATATGAGATCAAATGTTA  300

seq1  CTACATATGCAATATGTTGTATTTGGCATGAAAAAGCATAATATGCCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATATGCAATATGTTGTATTTGGCATGAAAAAGCATAATATGCCAAT  350

seq1  TAAAATATTTCAACTCATAAACTTGCTGGGAAACCTTTATGGACTTTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTTCAACTCATAAACTTGCTGGGAAACCTTTATGGACTTTATG  400

seq1  GAGTTTATTCAAATTCAAAAAGTTAAGGGCCTAAGAAAATATGTTATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTATTCAAATTCAAAAAGTTAAGGGCCTAAGAAAATATGTTATATG  450

seq1  AATGCTTTGGATCACACACAACTGGAAATCACACAAAGATACAGACTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTTGGATCACACACAACTGGAAATCACACAAAGATACAGACTTGA  500

seq1  ATCTCAGGATGCTCATCCTAAATGAATTC  529
      |||||||||||||||||||||||||||||
seq2  ATCTCAGGATGCTCATCCTAAATGAATTC  529


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