BAC Information

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BAC

Clone NameB6Ng01-191N11
Chromosome12 (Build37)
Map Location 9,113,633 - 9,279,199
singlet/doubletdoublet
Overlap genenone
Upstream gene1110057K04Rik, Gdf7, Hs1bp3, BC106175, Rhob, Slc7a15, LOC100043154, Pum2, F730043H23, Sdc1, Laptm4a, Matn3, Wdr35, Ttc32
Downstream geneLOC633030, LOC100042238, Osr1, LOC382567
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191N11.bB6Ng01-191N11.g
ACCGA015235GA015236
length1,123843
definitionB6Ng01-191N11.b B6Ng01-191N11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,278,067 - 9,279,199)(9,113,633 - 9,114,470)
sequence
gaattcaaaggagatcctccacctgactctacctcctaagtcctgagatt
gcagacatgtactaccaaacttggttcttcccttcatttttgatcaagca
attgtgctacagtaagcaggggcctgtacagatttccctcatacaattta
actttggataggtcatgagtttcttatagtcttagtggtcagttttaaaa
tagaggcatctgaaaggccaccatgtagcattgttgtgagattctaacaa
gaaaatgtgtgttattattgctgagtgccttaaaatgctttggcagtata
taccatgtgttctctttattaggaaccctcctccagacctagctgactga
aactcaaagtacagtccaggattatgcaggctctccgatctctttaactc
aatcagcagcatgaccctcagtggtgtggatgtaagtatgccaacactca
cctggatcacacgttacataatgtaattagaacacgacggggtaagaaat
ctatgttggggcccaagccacaatcaagacacaaagataaggactagagg
catccacatgtgttgtgggctactacccctcaaatggagctggatgtcct
caaaacaaggtctgtgttcagacgcactcatcacctggagctcaggctgc
aaggatgtagtctggaagccagccctaagactggccctggtacatggaaa
ccttagcttccagatgctgctgtagcactgtaaacatctggtctcctggc
ttcacagggcagagtgataccgccatgcacacatacatcagcaacctcta
agggcattagcagacatctggggagctcagcctgctgggtttggcttgtc
tgattggaaggaatacaagaagattctcaaatccctaagacaagactaac
ccaggagagttatcaatctggtgggggttcctagttgccagagcctccct
ttctggaatccaagtcacagccgcttaacaatagaccaccagctgctagc
acaagaatagcaagcagcagtatgtcatacattgcagatctggggagcag
cagcagcacttagacgaagatttccctggctcagctaatttagaacacca
cataaacaacattgtgttatgtt
gaattctcctctgcatccttttgtggggtccttagcaccgttctgtcctt
ggtgaattctctccatcctttcgtggggtccttagcaccattctgtcctt
ggcgactcactcgctccaaatctcccctggaaactctggatggagtggaa
tccagagccacattcaactttatttccagtggtaaaacatttggtgtttg
tctcatgctttgtctaacccctggctccttagtggaatttaccttctgtc
cgtgggagatgggaagggggatgggcttcttgttctttgatgggtctcat
gaacagaaagaccaggcgttctttttttttttttcttttcttttcttttc
ttttcttttctttttttctttttctttctttttttttttttttttttttt
tggcttttcgagatagggtttctctgtatagccctggctgtcacactttg
taaaccaggctggcctcgaactcagaaatccacctgcctctgcctcccga
gtgctgggattaaaggcgtgcgccacgcccagcaagaccaggcgctcttt
gagggccaggtttagtcctttctatgacccagtgcatatcaggacacact
agtgccttaactcttctctcaaagtgcttacaacctcaatgtaccctctt
gggttcacacaacctgggacctgacaccaggctgaaactgcacctccaga
tttgcccttgcctggggggaaaccctccgttttggctgttacttctcact
tccctgaccttagcaactggggaagtctgtcactggtcccccaggggcgt
ggggaatggttttccacaaccctatagacaatcttggtgttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_9278067_9279199
seq2: B6Ng01-191N11.b_46_1168 (reverse)

seq1  AACAT-ACACAATGTTGTTTAATGTGGTGTTTCTAAAATTAGCTGAGCCA  49
      ||||| |||||||||||||| |||||||| |||| |||||||||||||||
seq2  AACATAACACAATGTTGTTT-ATGTGGTG-TTCT-AAATTAGCTGAGCCA  47

seq1  GGGAAATCCTTTCTGTCTAAGTGCTGCTGCTGCTCCCCAGATCTGCCATG  99
      ||||||||  ||| |||||||||||||||||||||||||||||||| |||
seq2  GGGAAATC--TTC-GTCTAAGTGCTGCTGCTGCTCCCCAGATCTGCAATG  94

seq1  TATGACATACTTGCTGGCCTTGCTA-TCTTGTGCTAGCAGCTTGGTGGTC  148
      |||||||||| |||||  ||||||| ||||||||||||||| ||||||||
seq2  TATGACATAC-TGCTG--CTTGCTATTCTTGTGCTAGCAGC-TGGTGGTC  140

seq1  TATTTGTTAGCGGCTGTGACTTGGATTCCAGAAA-GGAGGCTTCTGGCAA  197
      ||||  | |||||||||||||||||||||||||| |||||| ||||||||
seq2  TATTGTTAAGCGGCTGTGACTTGGATTCCAGAAAGGGAGGC-TCTGGCAA  189

seq1  CTAGGAAACCCCCACCAGATTGAT-ACTCTCCTGGGTTAGTCTTGTTCTT  246
      ||||| |||||||||||||||||| |||||||||||||||||||| ||||
seq2  CTAGG-AACCCCCACCAGATTGATAACTCTCCTGGGTTAGTCTTG-TCTT  237

seq1  AGGGATTTTGAGAATCTTCTTGTATTCCTTCCAATCAGACAAGCCAAACC  296
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGA-TTTGAGAATCTTCTTGTATTCCTTCCAATCAGACAAGCCAAACC  286

seq1  CAGCAGGCTGAGCTCCCCAGATGTCTGCTAATGCCCTTAGAGGTTGCTGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGCTGAGCTCCCCAGATGTCTGCTAATGCCCTTAGAGGTTGCTGA  336

seq1  TGTATGTGTGCATGGCGGTATCACTCTGCCCTGTGAAGCCAGGAGACCAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGTGCATGGCGGTATCACTCTGCCCTGTGAAGCCAGGAGACCAG  386

seq1  ATGTTTACAGTGCTACAGCAGCATCTGGAAGCTAAGGTTTCCATGTACCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTACAGTGCTACAGCAGCATCTGGAAGCTAAGGTTTCCATGTACCA  436

seq1  GGGCCAGTCTTAGGGCTGGCTTCCAGACTACATCCTTGCAGCCTGAGCTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGTCTTAGGGCTGGCTTCCAGACTACATCCTTGCAGCCTGAGCTC  486

seq1  CAGGTGATGAGTGCGTCTGAACACAGACCTTGTTTTGAGGACATCCAGCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGATGAGTGCGTCTGAACACAGACCTTGTTTTGAGGACATCCAGCT  536

seq1  CCATTTGAGGGGTAGTAGCCCACAACACATGTGGATGCCTCTAGTCCTTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGAGGGGTAGTAGCCCACAACACATGTGGATGCCTCTAGTCCTTA  586

seq1  TCTTTGTGTCTTGATTGTGGCTTGGGCCCCAACATAGATTTCTTACCCCG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTGTCTTGATTGTGGCTTGGGCCCCAACATAGATTTCTTACCCCG  636

seq1  TCGTGTTCTAATTACATTATGTAACGTGTGATCCAGGTGAGTGTTGGCAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGTTCTAATTACATTATGTAACGTGTGATCCAGGTGAGTGTTGGCAT  686

seq1  ACTTACATCCACACCACTGAGGGTCATGCTGCTGATTGAGTTAAAGAGAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACATCCACACCACTGAGGGTCATGCTGCTGATTGAGTTAAAGAGAT  736

seq1  CGGAGAGCCTGCATAATCCTGGACTGTACTTTGAGTTTCAGTCAGCTAGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGAGCCTGCATAATCCTGGACTGTACTTTGAGTTTCAGTCAGCTAGG  786

seq1  TCTGGAGGAGGGTTCCTAATAAAGAGAACACATGGTATATACTGCCAAAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGGAGGGTTCCTAATAAAGAGAACACATGGTATATACTGCCAAAG  836

seq1  CATTTTAAGGCACTCAGCAATAATAACACACATTTTCTTGTTAGAATCTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAGGCACTCAGCAATAATAACACACATTTTCTTGTTAGAATCTC  886

seq1  ACAACAATGCTACATGGTGGCCTTTCAGATGCCTCTATTTTAAAACTGAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAATGCTACATGGTGGCCTTTCAGATGCCTCTATTTTAAAACTGAC  936

seq1  CACTAAGACTATAAGAAACTCATGACCTATCCAAAGTTAAATTGTATGAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGACTATAAGAAACTCATGACCTATCCAAAGTTAAATTGTATGAG  986

seq1  GGAAATCTGTACAGGCCCCTGCTTACTGTAGCACAATTGCTTGATCAAAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCTGTACAGGCCCCTGCTTACTGTAGCACAATTGCTTGATCAAAA  1036

seq1  ATGAAGGGAAGAACCAAGTTTGGTAGTACATGTCTGCAATCTCAGGACTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGGAAGAACCAAGTTTGGTAGTACATGTCTGCAATCTCAGGACTT  1086

seq1  AGGAGGTAGAGTCAGGTGGAGGATCTCCTTTGAATTC  1133
      |||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTAGAGTCAGGTGGAGGATCTCCTTTGAATTC  1123

seq1: chr12_9113633_9114470
seq2: B6Ng01-191N11.g_69_911

seq1  GAATTCTCCTCTGCATCCTTTTGTGGGGTCCTTAGCACCGTTCTGTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTCTGCATCCTTTTGTGGGGTCCTTAGCACCGTTCTGTCCTT  50

seq1  GGTGAATTCTCTCCATCCTTTCGTGGGGTCCTTAGCACCATTCTGTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAATTCTCTCCATCCTTTCGTGGGGTCCTTAGCACCATTCTGTCCTT  100

seq1  GGCGACTCACTCGCTCCAAATCTCCCCTGGAAACTCTGGATGGAGTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGACTCACTCGCTCCAAATCTCCCCTGGAAACTCTGGATGGAGTGGAA  150

seq1  TCCAGAGCCACATTCAACTTTATTTCCAGTGGTAAAACATTTGGTGTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGCCACATTCAACTTTATTTCCAGTGGTAAAACATTTGGTGTTTG  200

seq1  TCTCATGCTTTGTCTAACCCCTGGCTCCTTAGTGGAATTTACCTTCTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGCTTTGTCTAACCCCTGGCTCCTTAGTGGAATTTACCTTCTGTC  250

seq1  CGTGGGAGATGGGAAGGGGGATGGGCTTCTTGTTCTTTGATGGGTCTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGGAGATGGGAAGGGGGATGGGCTTCTTGTTCTTTGATGGGTCTCAT  300

seq1  GAACAGAAAGACCAGGCGTTCTTTTTTTTTTTTTCTTTTCTTTTCTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGAAAGACCAGGCGTTCTTTTTTTTTTTTTCTTTTCTTTTCTTTTC  350

seq1  TTTTCTTTTCTTTTTTTCTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTCTTTTTTTCTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTT  400

seq1  TGGCTTTTCGAGATAGGGTTTCTCTGTATAGCCCTGGCTGTCACACTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTTCGAGATAGGGTTTCTCTGTATAGCCCTGGCTGTCACACTTTG  450

seq1  TAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGA  500
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGA  500

seq1  GTGCTGGGATTAAAGGCGTGCGCCACGCCCAGCAAGACCAGGCGCTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGGATTAAAGGCGTGCGCCACGCCCAGCAAGACCAGGCGCTCTTT  550

seq1  GAGGGCCAGGTTTAGTCCTTTCTATGACCCAGTGCATATCAGGACACACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCCAGGTTTAGTCCTTTCTATGACCCAGTGCATATCAGGACACACT  600

seq1  AGTGCCTTAACTCTTCTCTCAGAGTGCTTACAACCTCAATGTACCCTCTT  650
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGTGCCTTAACTCTTCTCTCAAAGTGCTTACAACCTCAATGTACCCTCTT  650

seq1  GGGTTCACACAACCTGGGACCTGACACCAGGCTGAAACTGCACCTCCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCACACAACCTGGGACCTGACACCAGGCTGAAACTGCACCTCCAGA  700

seq1  TTTGCCCTTGCCTGGGGGG-AACCCTCCGTTTTGGCTGTTACTTCTCACT  749
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTTGCCCTTGCCTGGGGGGAAACCCTCCGTTTTGGCTGTTACTTCTCACT  750

seq1  TCCCTGACCTTAGCAGCTGGGGAAGTCTGTCACTGGTCCCCCAGGTGCGT  799
      ||||||||||||||| ||||||||||||||||||||||||||||| ||||
seq2  TCCCTGACCTTAGCAACTGGGGAAGTCTGTCACTGGTCCCCCAGGGGCGT  800

seq1  -GGGAGTGGTTTT-CACAA-CCTAAAGACAATC-TGGTGTTGA  838
       |||| ||||||| ||||| |||| |||||||| |||||||||
seq2  GGGGAATGGTTTTCCACAACCCTATAGACAATCTTGGTGTTGA  843