BAC Information

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BAC

Clone NameB6Ng01-192E08
Chromosome12 (Build37)
Map Location 41,988,481 - 41,989,617
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp277, Dock4, LOC638487, LOC100043157, LOC100043162
Downstream geneLrrn3, Immp2l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192E08.g
ACCGA015552
length1,146
definitionB6Ng01-192E08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccatataccattaacttcgtacactaaaatgaattgaagaaact
aattattcagaaacagagagtggcctctgggaaacatggttgcttaaaag
gatttaatagtcagagcgtgtgcagattattatcatgaattaaagtaatg
agaggatgaagatattaggaagaaagagaggctctactgaatgctagtct
tgcctctcctgtcacagtgaaaaaccactgtccaaatccagcatgcagca
acgattttccagcaagaaactaagggtttttatgatcctggccttcaaag
caaaattatgcaaagactggtatagaggggcaaaagtataaacgtgaata
ttgtttcccaaatggcaaagaagtaacacctagacaaaaatctgggaaag
gggaattacctgaccactaatgtcctaaatcaagagaacttccacattaa
tcttttaagtataattagaggagaaatgtgaacaaaaatgcttttataca
tacatacataaatacacacatacatatattggaaaaactgctcttgaagt
atgatcttcatgatatcctcaaaaaggaaacaaaaaataagactctagaa
ttatggctgtttgaaagctacttcatgggcaaagtattttctgatacctc
ttttaattaggaaagcccttaagcagacataaaaacatagacatattaat
catcttgtatattgaagacattggccttgctatgaaagggtgtgggggtt
agaggacgacaaaggggaggagacaaaaattacactccagcatcagcttt
cagaaccagtaaagtcatatgggtgtctatggttggttctccagccaatg
ggtcctttataaaaaatattctattactgtcctgagctagagattagtta
tgtcctattcatgcatgtgcttaaatacctagcctaataccacttcgggg
catatactcaaaaagaggctccacagataacaaggaacacatgctctact
gtttttcataggcagccttatttatactaggccagaaggctgaaacatcc
agattgtccttttcaacagaagattgaatacaggaaaatgtgggtgccat
ttacacatgcaatattctttcaggctattaagtgatgactccatga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_41988481_41989617
seq2: B6Ng01-192E08.g_66_1211 (reverse)

seq1  TCATGAAGTCATCACTTTTAATAG-CTG-AAGAATATTCCATTGTGTAAA  48
      ||||| |||||||||  ||||||| ||| ||||||||| || ||||||||
seq2  TCATGGAGTCATCAC--TTAATAGCCTGAAAGAATATTGCA-TGTGTAAA  47

seq1  T-GCA-CCACATTTT-CTGTATCCATTCTTCTGTTGAAA--GAC-ATCTG  92
      | ||| ||||||||| |||||| || |||||||||||||  ||| |||||
seq2  TGGCACCCACATTTTCCTGTATTCAATCTTCTGTTGAAAAGGACAATCTG  97

seq1  GATTGTTTCCAGCTTCTGG-CTAGTATAAATAAGGCTG-CTATG-AAAAC  139
      || ||||||   ||||||| |||||||||||||||||| ||||| |||||
seq2  GA-TGTTTCAGCCTTCTGGCCTAGTATAAATAAGGCTGCCTATGAAAAAC  146

seq1  AGTAGAGCATGTG-TCCTTGTTATCTGTTGGAGCCTC-TTTTGAGTATAT  187
      ||||||||||||| ||||||||||||| ||||||||| ||||||||||||
seq2  AGTAGAGCATGTGTTCCTTGTTATCTG-TGGAGCCTCTTTTTGAGTATAT  195

seq1  GCCCCGAAGTGGTA-TAGGCTAGGTATTTAAGCACATGCATGAATAGGAC  236
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GCCCCGAAGTGGTATTAGGCTAGGTATTTAAGCACATGCATGAATAGGAC  245

seq1  ATAACTAATCTCTAGCTCAGGACAGTAATAGAATATTTTTTATAAAGGAC  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTAATCTCTAGCTCAGGACAGTAATAGAATATTTTTTATAAAGGAC  295

seq1  CCATTGGCTGGAGAACCAACCATAGACACCCATATGACTTTACTGGTTCT  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGGCTGGAGAACCAACCATAGACACCCATATGACTTTACTGGTTCT  345

seq1  GAAAGCTGATGCTGGAGTGTAATTTTTGTCTCCTCCCCTTTGTCGTCCTC  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTGATGCTGGAGTGTAATTTTTGTCTCCTCCCCTTTGTCGTCCTC  395

seq1  TAACCCCCACACCCTTTCATAGCAAGGCCAATGTCTTCAATATACAAGAT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCCCACACCCTTTCATAGCAAGGCCAATGTCTTCAATATACAAGAT  445

seq1  GATTAATATGTCTATGTTTTTATGTCTGCTTAAGGGCTTTCCTAATTAAA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATATGTCTATGTTTTTATGTCTGCTTAAGGGCTTTCCTAATTAAA  495

seq1  AGAGGTATCAGAAAATACTTTGCCCATGAAGTAGCTTTCAAACAGCCATA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTATCAGAAAATACTTTGCCCATGAAGTAGCTTTCAAACAGCCATA  545

seq1  ATTCTAGAGTCTTATTTTTTGTTTCCTTTTTGAGGATATCATGAAGATCA  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGAGTCTTATTTTTTGTTTCCTTTTTGAGGATATCATGAAGATCA  595

seq1  TACTTCAAGAGCAGTTTTTCCAATATATGTATGTGTGTATTTATGTATGT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCAAGAGCAGTTTTTCCAATATATGTATGTGTGTATTTATGTATGT  645

seq1  ATGTATAAAAGCATTTTTGTTCACATTTCTCCTCTAATTATACTTAAAAG  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATAAAAGCATTTTTGTTCACATTTCTCCTCTAATTATACTTAAAAG  695

seq1  ATTAATGTGGAAGTTCTCTTGATTTAGGACATTAGTGGTCAGGTAATTCC  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGTGGAAGTTCTCTTGATTTAGGACATTAGTGGTCAGGTAATTCC  745

seq1  CCTTTCCCAGATTTTTGTCTAGGTGTTACTTCTTTGCCATTTGGGAAACA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCCAGATTTTTGTCTAGGTGTTACTTCTTTGCCATTTGGGAAACA  795

seq1  ATATTCACGTTTATACTTTTGCCCCTCTATACCAGTCTTTGCATAATTTT  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCACGTTTATACTTTTGCCCCTCTATACCAGTCTTTGCATAATTTT  845

seq1  GCTTTGAAGGCCAGGATCATAAAAACCCTTAGTTTCTTGCTGGAAAATCG  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGAAGGCCAGGATCATAAAAACCCTTAGTTTCTTGCTGGAAAATCG  895

seq1  TTGCTGCATGCTGGATTTGGACAGTGGTTTTTCACTGTGACAGGAGAGGC  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCATGCTGGATTTGGACAGTGGTTTTTCACTGTGACAGGAGAGGC  945

seq1  AAGACTAGCATTCAGTAGAGCCTCTCTTTCTTCCTAATATCTTCATCCTC  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTAGCATTCAGTAGAGCCTCTCTTTCTTCCTAATATCTTCATCCTC  995

seq1  TCATTACTTTAATTCATGATAATAATCTGCACACGCTCTGACTATTAAAT  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACTTTAATTCATGATAATAATCTGCACACGCTCTGACTATTAAAT  1045

seq1  CCTTTTAAGCAACCATGTTTCCCAGAGGCCACTCTCTGTTTCTGAATAAT  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAAGCAACCATGTTTCCCAGAGGCCACTCTCTGTTTCTGAATAAT  1095

seq1  TAGTTTCTTCAATTCATTTTAGTGTACGAAGTTAATGGTATATGGGAATT  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCTTCAATTCATTTTAGTGTACGAAGTTAATGGTATATGGGAATT  1145

seq1  C  1137
      |
seq2  C  1146


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