BAC Information

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BAC

Clone NameB6Ng01-194A08
Chromosome12 (Build37)
Map Location 93,527,370 - 93,528,499
singlet/doubletsinglet
Overlap genenone
Upstream gene4930534B04Rik, Tshr, Gtf2a1, Ston2, EG666955, LOC100039631, Sel1l, LOC100039367, EG432681, LOC667589, LOC100039387, LOC100039425, LOC628116
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194A08.bB6Ng01-194A08.g
ACCGA016827GA016828
length1,2211,116
definitionB6Ng01-194A08.b B6Ng01-194A08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagattgaagtttttatcatac
agatctttcacctccttagttagagtcacgcccagatattttatattatt
tgtgactattgagaaggtgttgtttccctaatttctttctcagcctgttt
attctttgtataagagaaaggccattgacttgtttgagtttattttaata
tccagctacctcacgaggctgttttattcaagttaggagttctctggtag
aaattttaggttcaataatatacatcatatcatctgccaaagtgaatttg
gacttcccttccatgtatccatgaatctttgttggcaaattgtcctcttg
gctaacatactcttagcagta
gaattcatagcatgggaaaaagtaggaacagtaattttactgatgttttt
aaacacaaggaaaaactaagatattttatccaaggatagaatgatattaa
gacatactgaattatacttgagttaaaatggtcatgaatccaatgagctg
tgcattaatttctcctatacttcattcattatgtaattaaatcaacaaag
caaaatgtttgttttatatgtccagtactctgaagatttcttgtgaaaaa
atgtaatcaagaattctttattcttgactgttcaacacattttcaatgct
gaaaagtgaagaagactgcttcaattaaacagttaaaaattgtaaaaaaa
aaaaaaaaaaaaaaaaaacctttgctaaaaacacaatagacattatcaat
aaaatgcttggatgctgttaacagcaaataataaaacatccatgtcctta
ttgctttttgatcacaacagatacattaagtgtgagaaaattaaagaaag
gcaatgtactcccaaagactaagacactctaatgtactcttcagaaagat
atgaaggacactaaataagatagatccttcaaagaaaaattcctatttcc
taatagttcattcaggtatgaactcatcaatagattgatccattaataaa
attaataatcccatgtgtgatgatctgtatatgcttggcccacagagcta
aattattatggccttgttggagtaggtatgtcactgtgggtgtgggctta
agatccttatcctagctgcctggaaatcaatatttggttagcagccttca
gataaaaatgtagaactcttagctcctcctgcaccatgcctgtctagatg
ctgccatgttcccaccttgatgatactgggactaaatctctgaacctgta
agccagccccagtttaaatgatgtcctttataagacttgccttggtcatg
gtatctgttcacagcagcaaactgtaactagacaccaagatacatgacta
ttctgtcactagcactgagaaataagactcagcaatgagccttgagacat
attatatttaatcataaaatatatatttaattgaaagtttacttgggctc
ataggagtccagagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_93527370_93528499
seq2: B6Ng01-194A08.g_65_1180 (reverse)

seq1  GTCTCTGTGAACTCCTATGAGCCCAGGTTAAAACTTTCCATTTTAAATAT  50
      |||||  || ||||||||||||||| ||  |||||||| |  ||||||||
seq2  GTCTC--TGGACTCCTATGAGCCCAAGT--AAACTTTCAA--TTAAATAT  44

seq1  ATATTTTTATGATTTAAATATAATATGGTCTCAAAGGCTCATGTGCTGAA  100
      ||| |||||||| ||||||||||||| ||||| ||||||||| ||||| |
seq2  ATA-TTTTATGA-TTAAATATAATAT-GTCTC-AAGGCTCAT-TGCTG-A  88

seq1  GTCTTATTTCTCAGTTGCTAGTGACAGAATAGTCATTGTATCTTGGTGTC  150
      |||||||||||||| |||||||||||||||||||| ||||||||||||||
seq2  GTCTTATTTCTCAG-TGCTAGTGACAGAATAGTCA-TGTATCTTGGTGTC  136

seq1  TTAGTTACAGTTTTGCTGCTGTGAACAGATACCATGACCAAGGCAAGTCT  200
       ||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  -TAGTTACAG-TTTGCTGCTGTGAACAGATACCATGACCAAGGCAAGTCT  184

seq1  TATAAAGGACATCATTT-AACTGGGGCTGGCTTACAGGTTCAGAGATTTA  249
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TATAAAGGACATCATTTAAACTGGGGCTGGCTTACAGGTTCAGAGATTTA  234

seq1  GT-CCAGTATCATCAAGGTGGGAACATGGCAGCATCTAGACAGGCATGGT  298
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGTATCATCAAGGTGGGAACATGGCAGCATCTAGACAGGCATGGT  284

seq1  GCAGGAGGAGCTAAGAGTTCTACATTTTTATCTGAAGGCTGCTAACCAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGGAGCTAAGAGTTCTACATTTTTATCTGAAGGCTGCTAACCAAA  334

seq1  TATTGATTTCCAGGCAGCTAGGATAAGGATCTTAAGCCCACACCCACAGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATTTCCAGGCAGCTAGGATAAGGATCTTAAGCCCACACCCACAGT  384

seq1  GACATACCTACTCCAACAAGGCCATAATAATTTAGCTCTGTGGGCCAAGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATACCTACTCCAACAAGGCCATAATAATTTAGCTCTGTGGGCCAAGC  434

seq1  ATATACAGATCATCACACATGGGATTATTAATTTTATTAATGGATCAATC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAGATCATCACACATGGGATTATTAATTTTATTAATGGATCAATC  484

seq1  TATTGATGAGTTCATACCTGAATGAACTATTAGGAAATAGGAATTTTTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATGAGTTCATACCTGAATGAACTATTAGGAAATAGGAATTTTTCT  534

seq1  TTGAAGGATCTATCTTATTTAGTGTCCTTCATATCTTTCTGAAGAGTACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGATCTATCTTATTTAGTGTCCTTCATATCTTTCTGAAGAGTACA  584

seq1  TTAGAGTGTCTTAGTCTTTGGGAGTACATTGCCTTTCTTTAATTTTCTCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGTGTCTTAGTCTTTGGGAGTACATTGCCTTTCTTTAATTTTCTCA  634

seq1  CACTTAATGTATCTGTTGTGATCAAAAAGCAATAAGGACATGGATGTTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAATGTATCTGTTGTGATCAAAAAGCAATAAGGACATGGATGTTTT  684

seq1  ATTATTTGCTGTTAACAGCATCCAAGCATTTTATTGATAATGTCTATTGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTGCTGTTAACAGCATCCAAGCATTTTATTGATAATGTCTATTGT  734

seq1  GTTTTTAGCAAAGGTTTTTTTTTTTTTTTTTTTTTTTTTACAATTTTTAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAGCAAAGGTTTTTTTTTTTTTTTTTTTTTTTTTACAATTTTTAA  784

seq1  CTGTTTAATTGAAGCAGTCTTCTTCACTTTTCAGCATTGAAAATGTGTTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTAATTGAAGCAGTCTTCTTCACTTTTCAGCATTGAAAATGTGTTG  834

seq1  AACAGTCAAGAATAAAGAATTCTTGATTACATTTTTTCACAAGAAATCTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCAAGAATAAAGAATTCTTGATTACATTTTTTCACAAGAAATCTT  884

seq1  CAGAGTACTGGACATATAAAACAAACATTTTGCTTTGTTGATTTAATTAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTACTGGACATATAAAACAAACATTTTGCTTTGTTGATTTAATTAC  934

seq1  ATAATGAATGAAGTATAGGAGAAATTAATGCACAGCTCATTGGATTCATG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAATGAAGTATAGGAGAAATTAATGCACAGCTCATTGGATTCATG  984

seq1  ACCATTTTAACTCAAGTATAATTCAGTATGTCTTAATATCATTCTATCCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTTAACTCAAGTATAATTCAGTATGTCTTAATATCATTCTATCCT  1034

seq1  TGGATAAAATATCTTAGTTTTTCCTTGTGTTTAAAAACATCAGTAAAATT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAAAATATCTTAGTTTTTCCTTGTGTTTAAAAACATCAGTAAAATT  1084

seq1  ACTGTTCCTACTTTTTCCCATGCTATGAATTC  1130
      ||||||||||||||||||||||||||||||||
seq2  ACTGTTCCTACTTTTTCCCATGCTATGAATTC  1116