BAC Information

Click to search

BAC

Clone NameB6Ng01-194H18
Chromosome12 (Build37)
Map Location 95,694,998 - 95,696,159
singlet/doubletsinglet
Overlap genenone
Upstream gene2610022K04Rik-ps, EG633639
Downstream geneLOC217786, LOC100039603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194H18.bB6Ng01-194H18.g
ACCGA017166GA017167
length1,1741,216
definitionB6Ng01-194H18.b B6Ng01-194H18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaatacacacatcacaaaaattggaaagcatgcatctgatatct
atcataggtagctaatgcctcctaattaaaatatgaaatttataatattt
taataatggaactgagcacagattatgattttgttcatatgatgtctgtg
tcaatgcctatagttttgatttgcattttcttccagaacaggttgaattc
tcagcatttgggaatcttcctataatatgacacactttctatttagccta
aagcaaacttaattaactctgagcacttctgttacttgtgataaatccag
tgatgtgttctttgagtaaacgaatcaacttctcagggtaatgtaaattt
ccataattatagtatgtctttctaacatggcacaatgcatgtgccttaaa
tgaagttcatttaaatttaggtaaagtgggcaatacttgcaaatttattt
tctttttttaaaatgagaatttattttccctcacactaggtagttattca
gctacatgaatatatttctctaaggtactagaagtgacaaggtaaatagc
gctaactgcagactctaagaaccacccagacatcaagtatgatttaaata
tacttcagaccatggggaaaagaaatcactaattgggttcctttttcaaa
aaaaaagtactttttcataagcttattgaaaggtttgaaaggctgttata
gattttagctttttaaataagtgagctacacaaactgacttgcatgtact
gaaaaaccactttagcgcagaaagcacaactgactatgatgtcatttcag
gactcaagccccacatctgtagctactctagggctgcttttgtgctacgg
agagtgatatcattttacttaaaattagccattcagttcaaataatgatc
tgctttttgtaatttttcccagattaactttctgggtaaaaagagcccag
ttcatgtgtgctggggttcatggtcacaccaccatattttgctataataa
cttcccatcagccaggaacccgagttaacgctaatgactgggatgcacat
agactgaagggctggtttaacgaactgaattgaactactgatcctaccca
ttatggcttggcaaaaatgccaatgacatacctagctcacgaattcactt
aggttaaattggttcccttgatct
gaattctctgattagctctgtcctgcatttttaaattcagttatttggtt
tgttggtgtctaacttcttgagttctttatatattttcaatagcaccact
ctgtcagatatagggttggtgatgatctatatacatgctgtaggctgcca
ttttgtcttatttagggtatcctttgccttacagaagcttttcagtttca
agggattccatttacttaattgttgatttagagtgtaggccattggtagt
ctgttaaggaatttgtctcctataccaatgtgttcaatgcaatggaataa
aaaaatagaaaagaagtaagcctacctgtatttgcagaagatattcactt
gtgaatactataaatgatcccagcaactctaccagaggacttttagatct
cataaacaccttctgcaaagtggctgtatacaaaattaattaaaaattaa
ccagtagccctgttttatataaatgataaatgggctgagaaagaaatcat
ggaaatgctacccttcacaatagccacaaataacataaaatatcttgatg
taactctaaccaagaaagcaaagtgtctgtatgacagaaacttcaagtat
ttgaagaaagaaatagaagaaagaaatattttttgttgtgtcactatgtg
cttttcagaactcatggaaatcaacagatatcatcaaggtgctataccaa
cagacatgacactgtattatttgatttgtagaattgtaagagtctattta
tggtatatttataatattttaagtaaactatatagttttttaggaagaga
aaaagaaatcttgactgaattattatttttttctgtagtttaaccatcct
ggccacatattttagagttatgaaaagacttgcatgcaattgcttctaag
tgaagaatgaatatgggctgtttttcatcaagaaattacctttgtttatc
taatcggtgcctggcaactctggtaacttatcacctcctccttctaggtt
agtgaattttatctagtgcatcctccatagcaataacatccacaatcgaa
atatttccaaattcctcaacaatctaatcctcccaaattgtcaataccct
ccatttcaagtgccttgttctctctggccagggattatggagtttttcaa
ttataccatattaagctatacacaatatggcgggaaccccgtaatattga
aaatttggttcgacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_95694998_95696159
seq2: B6Ng01-194H18.b_47_1220

seq1  GAATTCCAATACACACATCACAAAAATTGGAAAGCATGCATCTGATATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATACACACATCACAAAAATTGGAAAGCATGCATCTGATATCT  50

seq1  ATCATAGGTAGCTAATGCCTCCTAATTAAAATATGAAATTTATAATATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGGTAGCTAATGCCTCCTAATTAAAATATGAAATTTATAATATTT  100

seq1  TAATAATGGAACTGAGCACAGATTATGATTTTGTTCATATGATGTCTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATGGAACTGAGCACAGATTATGATTTTGTTCATATGATGTCTGTG  150

seq1  TCAATGCCTATAGTTTTGATTTGCATTTTCTTCCAGAACAGGTTGAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGCCTATAGTTTTGATTTGCATTTTCTTCCAGAACAGGTTGAATTC  200

seq1  TCAGCATTTGGGAATCTTCCTATAATATGACACACTTTCTATTTAGCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATTTGGGAATCTTCCTATAATATGACACACTTTCTATTTAGCCTA  250

seq1  AAGCAAACTTAATTAACTCTGAGCACTTCTGTTACTTGTGATAAATCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAACTTAATTAACTCTGAGCACTTCTGTTACTTGTGATAAATCCAG  300

seq1  TGATGTGTTCTTTGAGTAAACGAATCAACTTCTCAGGGTAATGTAAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGTTCTTTGAGTAAACGAATCAACTTCTCAGGGTAATGTAAATTT  350

seq1  CCATAATTATAGTATGTCTTTCTAACATGGCACAATGCATGTGCCTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATTATAGTATGTCTTTCTAACATGGCACAATGCATGTGCCTTAAA  400

seq1  TGAAGTTCATTTAAATTTAGGTAAAGTGGGCAATACTTGCAAATTTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTCATTTAAATTTAGGTAAAGTGGGCAATACTTGCAAATTTATTT  450

seq1  TCTTTTTTTAAAATGAGAATTTATTTTCCCTCACACTAGGTAGTTATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTAAAATGAGAATTTATTTTCCCTCACACTAGGTAGTTATTCA  500

seq1  GCTACATGAATATATTTCTCTAAGGTACTAGAAGTGACAAGGTAAATAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACATGAATATATTTCTCTAAGGTACTAGAAGTGACAAGGTAAATAGC  550

seq1  GCTAACTGCAGACTCTAAGAACCACCCAGACATCAAGTATGATTTAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACTGCAGACTCTAAGAACCACCCAGACATCAAGTATGATTTAAATA  600

seq1  TACTTCAGACCATGGGGAAAAGAAATCACTAATTGGGTTCCTTTTTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCAGACCATGGGGAAAAGAAATCACTAATTGGGTTCCTTTTTCAAA  650

seq1  AAAAAAGTACTTTTTCATAAGCTTATTGAAAGGTTTGAAAGGCTGTTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTACTTTTTCATAAGCTTATTGAAAGGTTTGAAAGGCTGTTATA  700

seq1  GATTTTAGCTTTTTAAATAAGTGAGCTACAC-AACTGACTTGCATGTACT  749
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GATTTTAGCTTTTTAAATAAGTGAGCTACACAAACTGACTTGCATGTACT  750

seq1  G-AAAACCAC-TTAGCGCAG-AAGCACAACTGACTATGATGTCATTTCAG  796
      | |||||||| ||||||||| |||||||||||||||||||||||||||||
seq2  GAAAAACCACTTTAGCGCAGAAAGCACAACTGACTATGATGTCATTTCAG  800

seq1  GACTCAAGCCCCACATCTGTAGCTACTCTAGGGCTGCTTTTGTGCTACGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAAGCCCCACATCTGTAGCTACTCTAGGGCTGCTTTTGTGCTACGG  850

seq1  AGAGTGATATCA-TTTACTTAAAATAAG-CATTCAGTTCAAATAATGATC  894
      |||||||||||| |||||||||||| || |||||||||||||||||||||
seq2  AGAGTGATATCATTTTACTTAAAATTAGCCATTCAGTTCAAATAATGATC  900

seq1  TGC-TTTTGTAA-TTTTCCCAGATTAACTTTCTGGGTAAAAAGAGCCCAG  942
      ||| |||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTTGTAATTTTTCCCAGATTAACTTTCTGGGTAAAAAGAGCCCAG  950

seq1  TTCATGTGTGCTGGGG-TCATGGTCACACCAACCATATTTTGCTATTATA  991
      |||||||||||||||| ||||||||||||| ||||||||||||||| |||
seq2  TTCATGTGTGCTGGGGTTCATGGTCACACC-ACCATATTTTGCTATAATA  999

seq1  AC-TCCCATCAGCAGGAAACCCGAGTTAACGCTAATGACT-GGATGCACA  1039
      || ||||||||||  | ||||||||||||||||||||||| |||||||||
seq2  ACTTCCCATCAGCCAGGAACCCGAGTTAACGCTAATGACTGGGATGCACA  1049

seq1  TAGACTGAA-GGCT-GTTTAAGGAACTGAATTGAACTACTGGTCCCACAC  1087
      ||||||||| |||| |||||| ||||||||||||||||||| ||| || |
seq2  TAGACTGAAGGGCTGGTTTAACGAACTGAATTGAACTACTGATCCTACCC  1099

seq1  A-TAGTGCTTGGGAAAAAATGCAATGACATACCCAAGCT-ACAGAATCAC  1135
      | ||  |||||| |||||   |||||||||| || |||| ||  | ||||
seq2  ATTATGGCTTGGCAAAAATGCCAATGACATA-CCTAGCTCACGAATTCAC  1148

seq1  TTAGTTTAAAAATGGTTCCCTAGATCT  1162
      |||| || ||| ||||||||| |||||
seq2  TTAGGTT-AAATTGGTTCCCTTGATCT  1174