BAC Information

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BAC

Clone NameB6Ng01-195G13
Chromosome12 (Build37)
Map Location 93,505,897 - 93,648,977
singlet/doubletdoublet
Overlap genenone
Upstream gene4930534B04Rik, Tshr, Gtf2a1, Ston2, EG666955, LOC100039631, Sel1l, LOC100039367, EG432681, LOC667589, LOC100039387, LOC100039425, LOC628116
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195G13.bB6Ng01-195G13.g
ACCGA017839GA017840
length9051,135
definitionB6Ng01-195G13.b B6Ng01-195G13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,505,897 - 93,506,796)(93,647,880 - 93,648,977)
sequence
gaattctctgagttttataattcctctttcccattttctatgggtttccc
ttggctcctcctagtgtttggctgtgggtctctgtatctgctcatatcag
ttgctgactgatatctctctgatgacaactgagctaagtatcaatctatg
attagagtagaatatcattagtagtaagttcattgactttttaaaagatt
ggtatactgaaaacttttgaatgagttttcaattttaggtaacgttgaaa
cttggctgtgccttgaattaaccagtattttgcctttgactggatagatt
ggtaacaaggtcaattgagaagattgaaggtagtaaaaatactttctgtt
tataaagttgtaaattagagttaatgtttgcttagatggctttagaaagt
agaatcatgctaaagaaaaaatcctgctatttagagtgataaagaagtta
ttattcaagaaaatttatagtgtgttacaatagaagagtttggatagttc
cagaagaataaagattgctagagttggatagctactgagcagagtaaaag
tcactggatggaaattttattaataggagacattagcagttgggcctctt
gatttaagaaggtgaggactgaagcatcaagggaaatgaataacttaatc
acataactaggatggtcaagtatcagcataactatgactaaacttactaa
gtacaacactatcgaccaaccagaactcccagggtctaaaccaccaacca
aggagtacacatggagggacacatgcctccagccgcatatgtagctgagg
atggccttttcagacatcaatggggagaagagacccttgggtcctgtgat
ggctcaatgccctcagttttaggagaaagcgagggccagggagaggagag
tcgtt

gaattcaataacttggtgatattaacagtaaaattgaccatgctgctgtt
aaaggtagagatctgagtgcagagtatatatagattttcatgatcatatg
atctggggaaaaacagtggatcttggaaacatcctgtaaaagaaatggag
agaatttaggaaaagagaaagagccctgacattgaagtgtgctagtgaac
agggaagacagaagctcagaagccctgggtcacgagttctagtctcttat
aggctatatacattaactcctacaaacctttatcccatgtttgtgtatca
aaatcttctcaggcatgttctttgtaacatatagccaaagccagaaaggg
tatatagtccttgtctttcaactagtttctttcgtattgataattgtctc
ttcttctgtcacatgggagctcattttgaaatgatttgccattcatttga
aatatttttgatgtgtgaaatgagaataaattgaataaatataaagctaa
gcctattaagcaagtttctttaacaaggagttcataaaactattttcctg
aatacttgcttagcccagcaactgaacagaataataaatattgaattggt
aaattaaaacttctttgaattgactttattacgtcttgtaagtatttctc
ttatttttatgtttatggattgaagtattcactgaagtaaatcatttaac
ctattagataaaaatgtatcctttgatatgaatgctatcaatgcaactat
accacccaatcaatgcaaattgatcataaaacaaataatgaaagtaggtc
tctccttaaagaaatcttgttaacaagctgaaggttaattcatacccaac
aaaatttttattagtgacatgaaaatttttaacaaaaaaattttagaagt
aaaagtgttttacatttcttaatattttcatgcttcttaagtttttaagt
tatataatactaataatttcagataatacttccctttgcttttttccttt
tgaccattcaaagggaatttttttaaaaagcgctttatttaaaagttatt
aaaaagtcttccttacatcttacttatgcatttaaaaaatgcctaattcc
ggaaagtatatgccattttaagtttactaattttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_93505897_93506796
seq2: B6Ng01-195G13.b_44_948

seq1  GAATTCTCTGAGTTTTATAATTCCTCTTTCCCATTTTCTATGGGTTTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGAGTTTTATAATTCCTCTTTCCCATTTTCTATGGGTTTCCC  50

seq1  TTGGCTCCTCCTAGTGTTTGGCTGTGGGTCTCTGTATCTGCTCATATCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTCCTCCTAGTGTTTGGCTGTGGGTCTCTGTATCTGCTCATATCAG  100

seq1  TTGCTGACTGATATCTCTCTGATGACAACTGAGCTAAGTATCAATCTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGACTGATATCTCTCTGATGACAACTGAGCTAAGTATCAATCTATG  150

seq1  ATTAGAGTAGAATATCATTAGTAGTAAGTTCATTGACTTTTTAAAAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGTAGAATATCATTAGTAGTAAGTTCATTGACTTTTTAAAAGATT  200

seq1  GGTATACTGAAAACTTTTGAATGAGTTTTCAATTTTAGGTAACGTTGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATACTGAAAACTTTTGAATGAGTTTTCAATTTTAGGTAACGTTGAAA  250

seq1  CTTGGCTGTGCCTTGAATTAACCAGTATTTTGCCTTTGACTGGATAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTGTGCCTTGAATTAACCAGTATTTTGCCTTTGACTGGATAGATT  300

seq1  GGTAACAAGGTCAATTGAGAAGATTGAAGGTAGTAAAAATACTTTCTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACAAGGTCAATTGAGAAGATTGAAGGTAGTAAAAATACTTTCTGTT  350

seq1  TATAAAGTTGTAAATTAGAGTTAATGTTTGCTTAGATGGCTTTAGAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGTTGTAAATTAGAGTTAATGTTTGCTTAGATGGCTTTAGAAAGT  400

seq1  AGAATCATGCTAAAGAAAAAATCCTGCTATTTAGAGTGATAAAGAAGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCATGCTAAAGAAAAAATCCTGCTATTTAGAGTGATAAAGAAGTTA  450

seq1  TTATTCAAGAAAATTTATAGTGTGTTACAATAGAAGAGTTTGGATAGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCAAGAAAATTTATAGTGTGTTACAATAGAAGAGTTTGGATAGTTC  500

seq1  CAGAAGAATAAAGATTGCTAGAGTTGGATAGCTACTGAGCAGAGTAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAATAAAGATTGCTAGAGTTGGATAGCTACTGAGCAGAGTAAAAG  550

seq1  TCACTGGATGGAAATTTTATTAATAGGAGACATTAGCAGTTGGGCCTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGATGGAAATTTTATTAATAGGAGACATTAGCAGTTGGGCCTCTT  600

seq1  GATTTAAGAAGGTGAGGACTGAAGCATCAAGGGAAATGAATAACTTAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAAGAAGGTGAGGACTGAAGCATCAAGGGAAATGAATAACTTAATC  650

seq1  ACATAACTAGGATGGTCAAGTATCAGCATAACTATGACTAAACTTACTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACTAGGATGGTCAAGTATCAGCATAACTATGACTAAACTTACTAA  700

seq1  GTACAACACTATCGACCAACCAGAACTCCCAGGGTCTAAACCACCAACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAACACTATCGACCAACCAGAACTCCCAGGGTCTAAACCACCAACCA  750

seq1  AGGAGTACACATGGAGGGACACATGCCTCCAGCCGCATATGTAGCTGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTACACATGGAGGGACACATGCCTCCAGCCGCATATGTAGCTGAGG  800

seq1  ATGGCCTTTTCAGACATCAAT-GGGAGAAGAGACCCTT-GGTCCTGTGAT  848
      ||||||||||||||||||||| |||||||||||||||| |||||||||||
seq2  ATGGCCTTTTCAGACATCAATGGGGAGAAGAGACCCTTGGGTCCTGTGAT  850

seq1  GGCTCAATG-CCTCAG-TTTAGGAGAAAGCGAGGG-CAGGGAGAGGAGAG  895
      ||||||||| |||||| |||||||||||||||||| ||||||||||||||
seq2  GGCTCAATGCCCTCAGTTTTAGGAGAAAGCGAGGGCCAGGGAGAGGAGAG  900

seq1  TCGGT  900
      ||| |
seq2  TCGTT  905


seq1: chr12_93647880_93648977
seq2: B6Ng01-195G13.g_68_1202 (reverse)

seq1  AAAAAATAGT-AACTT--AATTGC--ATACTT--CAGAATTA-GCATTTT  42
      ||||| |||| |||||  ||| ||  ||||||  | |||||| |||||||
seq2  AAAAATTAGTAAACTTAAAATGGCATATACTTTCCGGAATTAGGCATTTT  50

seq1  ---AATGCAT-AGT-AGATGTA--GGAGACTTTT--ATTACTTTT-AATA  82
         ||||||| ||| |||||||  | ||||||||  || |||||| ||||
seq2  TTAAATGCATAAGTAAGATGTAAGGAAGACTTTTTAATAACTTTTAAATA  100

seq1  AAGC---TTTT--AAAAATTCCCTTTGAATGGTCAAA---GAAAAAGCAA  124
      ||||   ||||  ||||||||||||||||||||||||    |||||||||
seq2  AAGCGCTTTTTAAAAAAATTCCCTTTGAATGGTCAAAAGGAAAAAAGCAA  150

seq1  --GGAAGTA-TATCTGAAA-TATAAGTA-TATATAAC-TAAAAACTT-AG  167
        ||||||| ||||||||| ||| |||| |||||||| ||||||||| ||
seq2  AGGGAAGTATTATCTGAAATTATTAGTATTATATAACTTAAAAACTTAAG  200

seq1  AAGCATGAAAATATTAAG-AATGTAAAACAC-TTTACTTCTAAAA-TTTT  214
      |||||||||||||||||| |||||||||||| ||||||||||||| ||||
seq2  AAGCATGAAAATATTAAGAAATGTAAAACACTTTTACTTCTAAAATTTTT  250

seq1  TTGTTAAAAATTTTCATGTCACTAATAAAAATTTTGTT-GGTATGAATTA  263
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTGTTAAAAATTTTCATGTCACTAATAAAAATTTTGTTGGGTATGAATTA  300

seq1  ACCTTCAGCTTGTTAACAAGATTTCTTTAAGGAGAGACCTACTTTCATTA  313
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCAGCTTGTTAACAAGATTTCTTTAAGGAGAGACCTACTTTCATTA  350

seq1  TTTGTTTTATGATCAATTTGCATTGATTGGGTGGTATAGTTGCATTGATA  363
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTATGATCAATTTGCATTGATTGGGTGGTATAGTTGCATTGATA  400

seq1  GCATTCATATCAAAGGATACATTTTTATCTAATAGGTTAAATGATTTACT  413
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCATATCAAAGGATACATTTTTATCTAATAGGTTAAATGATTTACT  450

seq1  TCAGTGAATACTTCAATCCATAAACATAAAAATAAGAGAAATACTTACAA  463
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGAATACTTCAATCCATAAACATAAAAATAAGAGAAATACTTACAA  500

seq1  GACGTAATAAAGTCAATTCAAAGAAGTTTTAATTTACCAATTCAATATTT  513
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTAATAAAGTCAATTCAAAGAAGTTTTAATTTACCAATTCAATATTT  550

seq1  ATTATTCTGTTCAGTTGCTGGGCTAAGCAAGTATTCAGGAAAATAGTTTT  563
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTGTTCAGTTGCTGGGCTAAGCAAGTATTCAGGAAAATAGTTTT  600

seq1  ATGAACTCCTTGTTAAAGAAACTTGCTTAATAGGCTTAGCTTTATATTTA  613
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTCCTTGTTAAAGAAACTTGCTTAATAGGCTTAGCTTTATATTTA  650

seq1  TTCAATTTATTCTCATTTCACACATCAAAAATATTTCAAATGAATGGCAA  663
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTTATTCTCATTTCACACATCAAAAATATTTCAAATGAATGGCAA  700

seq1  ATCATTTCAAAATGAGCTCCCATGTGACAGAAGAAGAGACAATTATCAAT  713
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTCAAAATGAGCTCCCATGTGACAGAAGAAGAGACAATTATCAAT  750

seq1  ACGAAAGAAACTAGTTGAAAGACAAGGACTATATACCCTTTCTGGCTTTG  763
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAAGAAACTAGTTGAAAGACAAGGACTATATACCCTTTCTGGCTTTG  800

seq1  GCTATATGTTACAAAGAACATGCCTGAGAAGATTTTGATACACAAACATG  813
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATGTTACAAAGAACATGCCTGAGAAGATTTTGATACACAAACATG  850

seq1  GGATAAAGGTTTGTAGGAGTTAATGTATATAGCCTATAAGAGACTAGAAC  863
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAAGGTTTGTAGGAGTTAATGTATATAGCCTATAAGAGACTAGAAC  900

seq1  TCGTGACCCAGGGCTTCTGAGCTTCTGTCTTCCCTGTTCACTAGCACACT  913
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGACCCAGGGCTTCTGAGCTTCTGTCTTCCCTGTTCACTAGCACACT  950

seq1  TCAATGTCAGGGCTCTTTCTCTTTTCCTAAATTCTCTCCATTTCTTTTAC  963
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTCAGGGCTCTTTCTCTTTTCCTAAATTCTCTCCATTTCTTTTAC  1000

seq1  AGGATGTTTCCAAGATCCACTGTTTTTCCCCAGATCATATGATCATGAAA  1013
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTTTCCAAGATCCACTGTTTTTCCCCAGATCATATGATCATGAAA  1050

seq1  ATCTATATATACTCTGCACTCAGATCTCTACCTTTAACAGCAGCATGGTC  1063
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATATATACTCTGCACTCAGATCTCTACCTTTAACAGCAGCATGGTC  1100

seq1  AATTTTACTGTTAATATCACCAAGTTATTGAATTC  1098
      |||||||||||||||||||||||||||||||||||
seq2  AATTTTACTGTTAATATCACCAAGTTATTGAATTC  1135


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