MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-197C20
Chromosome	12 (Build37)
Map Location	16,504,299 - 16,646,221
singlet/doublet	doublet
Overlap gene	Lpin1
Upstream gene	LOC217409, Trib2, LOC100043268, EG432636, LOC100043273
Downstream gene	Ntsr2, Greb1, E2f6, Rock2, Pqlc3, 2410004P03Rik, EG668514, Kcnf1, LOC100043299, Pdia6, Atp6v1c2, Nol10, LOC672501, Odc1, LOC100042522, LOC100042528
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC217409 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:217409
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Trib2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217410 MGI:2145021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043268 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043268
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs

name	EG432636 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432636 MGI:3649057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC100043273 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043273
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 34 ESTs, 2 Proteins pseudo : _no_value

name	Lpin1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14245 MGI:1891340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ntsr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18217 MGI:108018
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Greb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268527 MGI:2149712
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E2f6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50496 MGI:1354159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rock2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19878 MGI:107926
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pqlc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217430 MGI:2444067
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410004P03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73667 MGI:1920917
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	EG668514 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668514 MGI:3644934
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Kcnf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382571 MGI:2687399
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043299 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043299
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 816 ESTs, 6 Proteins pseudo : _no_value

name	Pdia6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71853 MGI:1919103
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp6v1c2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68775 MGI:1916025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nol10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217431 MGI:2684913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC672501 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672501
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Odc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18263 MGI:97402
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042522 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042522
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100042528 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042528
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Trib2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83921623 GeneID:217410 MGI:2145021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tribbles homolog 2 (Drosophila) transcript_id : NM_144551.5

name	LOC100043268 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262871 GeneID:100043268
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs product : hypothetical protein LOC100043268 transcript_id : XM_001480364.1

name	EG432636 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392418 GeneID:432636 MGI:3649057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG432636 transcript_id : XM_488626.3

name	Lpin1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68510036 GeneID:14245 MGI:1891340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipin 1 transcript_id : NM_172950.2

name	Lpin1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68510035 GeneID:14245 MGI:1891340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipin 1 transcript_id : NM_015763.3

name	Ntsr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121583911 GeneID:18217 MGI:108018
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neurotensin receptor 2 transcript_id : NM_008747.2

name	Greb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348314 GeneID:268527 MGI:2149712
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene regulated by estrogen in breast cancer protein transcript_id : NM_015764.2

name	E2f6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15149490 GeneID:50496 MGI:1354159
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : E2F transcription factor 6 transcript_id : NM_033270.1

name	Rock2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134949012 GeneID:19878 MGI:107926
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho-associated coiled-coil containing protein kinase 2 transcript_id : NM_009072.2

name	Pqlc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27369809 GeneID:217430 MGI:2444067
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PQ loop repeat containing transcript_id : NM_172574.1

name	2410004P03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392419 GeneID:73667 MGI:1920917
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : RIKEN cDNA 2410004P03 gene, transcript variant 1 transcript_id : XM_126830.7

name	EG668514 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392421 GeneID:668514 MGI:3644934
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG668514 transcript_id : XM_001001921.1

name	Kcnf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348935 GeneID:382571 MGI:2687399
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, subfamily F, member 1 transcript_id : NM_201531.2

name	Pdia6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382008 GeneID:71853 MGI:1919103
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein disulfide isomerase associated 6 transcript_id : NM_027959.2

name	Atp6v1c2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19526869 GeneID:68775 MGI:1916025
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, H+ transporting, lysosomal V1 subunit C2 transcript_id : NM_133699.1

name	Nol10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56606026 GeneID:217431 MGI:2684913
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleolar protein 10 transcript_id : NM_001008421.1

name	LOC672501 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262787 GeneID:672501
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical LOC672501 transcript_id : XM_001478358.1

name	Odc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:131888588 GeneID:18263 MGI:97402
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ornithine decarboxylase, structural 1 transcript_id : NM_013614.2

name	LOC100042522 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262789 GeneID:100042522
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042522 transcript_id : XM_001478374.1

name	Trib2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542100 CCDS:CCDS25821.1 GeneID:217410 MGI:2145021
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence ISS]; GO:0004672 - protein kinase activity [Evidence IEA] [Evidence ISS]; GO:0004860 - protein kinase inhibitor activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] [Evidence ISS]; GO:0043405 - regulation of MAPK activity [Evidence ISS] codon_start : 1 product : tribbles homolog 2 protein_id : NP_653134.2

name	LOC100043268 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262872 GeneID:100043268
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480414.1

name	EG432636 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82941268 GeneID:432636 MGI:3649057
definition	codon_start : 1 product : hypothetical protein protein_id : XP_488626.2

name	Lpin1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68510037 CCDS:CCDS25823.1 GeneID:14245 MGI:1891340
definition	GO_component : GO:0005634 - nucleus [Evidence IEP] [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006629 - lipid metabolism [Evidence IMP]; GO:0045598 - regulation of fat cell differentiation [Evidence IMP] codon_start : 1 note : isoform a is encoded by transcript variant 1; fatty liver dystrophy product : lipin 1 isoform a protein_id : NP_766538.2

name	Lpin1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27923941 CCDS:CCDS25822.1 GeneID:14245 MGI:1891340
definition	GO_component : GO:0005634 - nucleus [Evidence IEP] [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006629 - lipid metabolism [Evidence IMP]; GO:0045598 - regulation of fat cell differentiation [Evidence IMP] codon_start : 1 note : isoform b is encoded by transcript variant 2; fatty liver dystrophy product : lipin 1 isoform b protein_id : NP_056578.2

name	Ntsr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121583912 GeneID:18217 MGI:108018
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0016492 - neurotensin receptor activity, G-protein coupled [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : low affinity neurotensin receptor product : neurotensin receptor 2 protein_id : NP_032773.2

name	Greb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7656873 GeneID:268527 MGI:2149712
definition	codon_start : 1 exception : mismatches in translation product : Greb1 protein protein_id : NP_056579.1

name	E2f6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15149491 GeneID:50496 MGI:1354159
definition	GO_component : GO:0005662 - DNA replication factor A complex [Evidence IC]; GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0000083 - G1/S-specific transcription in mitotic cell cycle [Evidence IGI]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : transcriptional repressor E2F6 product : E2F transcription factor 6 protein_id : NP_150373.1

name	Rock2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134949013 GeneID:19878 MGI:107926
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : Rho-associated coiled-coil forming kinage 2 product : Rho-associated coiled-coil forming kinase 2 protein_id : NP_033098.2

name	Pqlc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369810 CCDS:CCDS25824.1 GeneID:217430 MGI:2444067
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : PQ loop repeat containing 3 protein_id : NP_766162.1

name	2410004P03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392420 GeneID:73667 MGI:1920917
definition	codon_start : 1 product : hypothetical protein LOC73667 isoform 1 protein_id : XP_126830.6

name	EG668514 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392422 GeneID:668514 MGI:3644934
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001001921.1

name	Kcnf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41462415 CCDS:CCDS25825.1 GeneID:382571 MGI:2687399
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] [Evidence ISS]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : potassium voltage-gated channel, subfamily F, member 1 protein_id : NP_963289.1

name	Pdia6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037267 CCDS:CCDS25826.1 GeneID:71853 MGI:1919103
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0003756 - protein disulfide isomerase activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] codon_start : 1 note : protein disulfide isomerase-related protein; thioredoxin domain containing 7 product : protein disulfide isomerase-associated 6 protein_id : NP_082235.1

name	Atp6v1c2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526870 CCDS:CCDS25827.1 GeneID:68775 MGI:1916025
definition	GO_component : GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0008553 - hydrogen-exporting ATPase activity, phosphorylative mechanism [Evidence IDA]; GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Evidence IEA] GO_process : GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA] codon_start : 1 note : ATPase, H+ transporting, V1 subunit C, isoform 2 product : vacuolar H+ ATPase C2 protein_id : NP_598460.1

name	Nol10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56606027 CCDS:CCDS25828.1 GeneID:217431 MGI:2684913
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : nucleolar protein 10 protein_id : NP_001008421.1

name	LOC672501 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262788 GeneID:672501
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478408.1

name	Odc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:131888589 CCDS:CCDS25829.1 GeneID:18263 MGI:97402
definition	EC_number : 4.1.1.17 GO_function : GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0004586 - ornithine decarboxylase activity [Evidence IEA] GO_process : GO:0001822 - kidney development [Evidence IMP]; GO:0006596 - polyamine biosynthesis [Evidence IEA]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP] codon_start : 1 product : ornithine decarboxylase, structural 1 protein_id : NP_038642.2

name	LOC100042522 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262790 GeneID:100042522
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478424.1

name	LOC217409 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:217409
definition	number : 1 pseudo : _no_value

name	LOC100042528 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042528
definition	number : 2 pseudo : _no_value

name	LOC100042528 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042528
definition	number : 1 pseudo : _no_value

name	LOC100043273 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149262873 GeneID:100043273
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 34 ESTs, 2 Proteins product : similar to Ac2-210 pseudo : _no_value transcript_id : XR_034655.1

name	LOC100043299 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149262874 GeneID:100043299
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 816 ESTs, 6 Proteins product : similar to ribosomal protein S23 pseudo : _no_value transcript_id : XR_034675.1

clone name	MSMg01-353K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108M12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-376J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145B16
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-197C20.b	B6Ng01-197C20.g
ACC	GA019111	GA019112
length	393	1,104
definition	B6Ng01-197C20.b	B6Ng01-197C20.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(16,504,299 - 16,504,697)	(16,645,143 - 16,646,221)
sequence	agagcagggacatggaggcaggagctgatacagaggctgtggacaagtgc ttgattacaggcttgcttctcttggcttgctcagtctgctttctcataga acccaggacctccatcccagggataacactacacactgcgggctgggccc tcccacatcaatcattaatcaggaaactatactataggtcattcttatgg agcattttctcaggaaagaagacagacggaaggaaggaaggaaggaagga aggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaag gtaggttaatacaaaagtgttaggcataccctaatcttggtcccctgccc ctagtaagcaagacagctagagaggaactgggtagtaggtaac	gaattctcttcatctaccgaatgaagtggtttaaactggttcaaaatgaa aagggtgggggaggggagacttggctcgtctgttcttttaccggatttga cctcagcagaaaccaagtttattaatagccatctgatagacactttgcag tggctggtgaagcgagccgagctcgagtgtctagcttttacacagttaga aatggccatggcgtcagtacatggagagagagaacgtgcgtcaacatgaa tgtaagccatcaatttgggaaacagcattttgcagacatgagttattctt gggtttttggtgatccagagcgctttaaagtgatgtatctggtttattat tgtgtactgtgtaaacgttcacgttgggtactatatctgccattttccat attttgctctatccctgcctaagaatccaacagtggggccaggcaagagg gcttcatgcataaaggcacttgctgccaaacttgattatctgcatttatt tctctaggctcacgtggtggaaggggagacctgactcctgaaagtgtcct ctgacctcagcccctaatgtgcaccatgtaatagtaaataaaaatgtaaa acacacacacagacacacacagacagacagacacacacacacagacacac agagagacacacacatacagacacacacacacagacacacacacagacac acacacacacagacacacacacatacacacagacacatgcacacacacac tcacacagacacacatagacagacagacacacacacacagacacacacac agacacacacacaaacacacacacagacacacacacatacacacagacac attgcacacacacacttcacacagacacacagacacatacacattacaca cacacacacacaccacacccggacacagagagagaagagaagagacccct acaatgaacaatttagtcacacacagatgaacctggagaggagtttttat ttagtattttcattttggtgtgtgtggtgcgccatgcacgcaccccttct ggtctgtctgttctctcctctcagcttgtttcaatctgggcagccatgct gttt
quality values	Open. Hide. 25 44 62 62 51 59 62 62 59 46 45 62 59 62 62 59 62 59 62 59 62 62 62 62 62 62 56 49 49 36 56 39 25 49 33 42 43 54 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 59 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 59 56 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 59 59 62 62 62 62 59 62 62 54 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 37 37 62 62 62 62 62 62 56 56 23 38 20 34 56 56 39 27 43 20 39 10 26 30 22 14 26 43 29 33 39 10 28 27 8 17 9 13 13 17 23 35 20 15 25 15 17 21 17 9 17 14 17 14 22 19 9 9 10 12 9 15 21 23 29 37 23 22 23 13 8 17 6 7 9 10 9 7 7 9 9 19 18 22 21 28 18 24 29 28 19 14 27 22 9 9 12 25 16 17 23 19	Open. Hide. 62 47 56 47 62 62 62 62 62 62 59 43 39 18 10 12 7 6 6 25 34 29 33 38 34 33 54 62 59 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 54 54 59 59 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 59 59 62 62 62 62 54 62 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 50 62 54 56 59 62 59 59 56 56 59 59 62 62 62 62 62 62 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 39 47 51 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 47 47 62 62 54 62 56 56 56 56 62 56 62 62 56 62 56 62 62 56 62 62 62 62 62 62 56 62 62 62 56 62 62 62 62 62 62 62 62 62 62 47 62 62 56 62 62 62 56 62 62 56 16 16 14 7 17 13 56 62 62 39 62 56 62 56 62 52 47 43 46 27 46 48 41 35 35 52 50 42 50 34 38 28 38 19 46 28 52 35 42 41 47 33 52 35 52 46 62 62 39 47 48 47 52 52 49 52 62 39 54 24 36 39 58 48 54 45 48 46 54 40 54 49 54 52 54 37 54 35 18 32 17 9 14 12 17 8 11 5 16 9 52 58 54 54 54 35 41 28 41 30 58 46 54 52 58 52 49 58 39 30 52 19 52 31 58 48 58 9 18 7 11 7 18 53 54 46 20 34 19 13 33 16 46 52 42 40 47 41 45 52 54 52 42 51 47 58 46 48 47 47 58 37 42 42 47 42 58 30 49 16 42 34 26 30 34 25 37 42 30 27 39 42 41 30 53 52 39 18 20 10 20 9 20 8 11 13 8 6 18 9 9 5 9 5 12 10 21 46 32 7 25 21 46 23 28 9 14 9 39 28 50 11 30 29 41 21 41 11 19 6 6 25 27 21 46 7 42 15 28 19 35 23 42 28 51 21 49 19 46 25 33 50 28 8 40 13 41 8 12 24 18 36 31 38 23 34 24 50 13 28 13 17 9 8 20 10 40 7 39 31 21 5 20 8 27 8 28 32 42 8 34 6 46 8 47 6 38 19 42 28 15 52 8 44 19 47 14 42 13 25 14 44 9 40 6 27 4 8 7 9 19 8 29 13 18 5 15 30 37 10 27 6 34 51 36 31 35 22 27 8 10 12 18 18 18 9 19 33 11 9 6 21 32 14 26 21 34 14 19 13 16 8 10 18 6 46 24 31 17 16 6 6 12 6 12 12 21 13 12 11 14 27 12 31 29 23 21 24 9 10 9 33 13 34 10 8 19 15 29 51 46 41 6 13 12 37 15 9 11 9 13 20 32 31 16 12 11 13 51 33 29 11 10 11 19 9 23 10 23 8 7 13 8 9 9 8 9 8 10 18 30 9 24 9 9 20 12 28 31 30 31 7 11 6 5 5 6 6 13 9 16 7 13 14 23 23 7 8 7 5 23 8 9 24 8 5 9 16 12 11 13 7 10 6 13 16 10 9 6 10 24 31 21 38 36 7 26 16 15 11 7 5 5 7 7 8 8 32 37

Alignment Information

BAC End 1

BAC End 2

seq1: chr12_16504299_16504697
seq2: B6Ng01-197C20.b_43_441

seq1  GAATTCAGAGCAGGGACATGGAGGCAGGAGCTGATACAGAGGCTGTGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGCAGGGACATGGAGGCAGGAGCTGATACAGAGGCTGTGGAC  50

seq1  AAGTGCTTGATTACAGGCTTGCTTCTCTTGGCTTGCTCAGTCTGCTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTTGATTACAGGCTTGCTTCTCTTGGCTTGCTCAGTCTGCTTTCT  100

seq1  CATAGAACCCAGGACCTCCATCCCAGGGATAACACTACACACTGCGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAACCCAGGACCTCCATCCCAGGGATAACACTACACACTGCGGGCT  150

seq1  GGGCCCTCCCACATCAATCATTAATCAGGAAACTATACTATAGGTCATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCTCCCACATCAATCATTAATCAGGAAACTATACTATAGGTCATTC  200

seq1  TTATGGAGCATTTTCTCAGGAAAGAAGACAGACGGAAGGAAGGAAGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGAGCATTTTCTCAGGAAAGAAGACAGACGGAAGGAAGGAAGGAAG  250

seq1  GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA  300

seq1  AGGAAGGTAGGTTAATACAAAAGTGTTAGGCATACCCTAATCTTGGTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGTAGGTTAATACAAAAGTGTTAGGCATACCCTAATCTTGGTCCC  350

seq1  CTGCCCCTAGTAAGCAAGACAGCTAGAGAGGAACTGGGTAGTAGGTAAC  399
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCTAGTAAGCAAGACAGCTAGAGAGGAACTGGGTAGTAGGTAAC  399

seq1: chr12_16645143_16646221
seq2: B6Ng01-197C20.g_68_1171 (reverse)

seq1  AAACAGCATGGCTG-CCAGA-TGAGAC-AGCTGAGA-GAGAG-ACAGACA  45
      |||||||||||||| ||||| ||| || |||||||| ||||| |||||||
seq2  AAACAGCATGGCTGCCCAGATTGAAACAAGCTGAGAGGAGAGAACAGACA  50

seq1  GA-CAG-AGGGGTGCGTGCAT-GCGCA-CACACACAC--AAATG-AAATA  88
      || ||| |||||||||||||| ||||| |||||||||  ||||| |||||
seq2  GACCAGAAGGGGTGCGTGCATGGCGCACCACACACACCAAAATGAAAATA  100

seq1  CTAA--TAAAACT-CTCT-CAGG-TCATCTGTGTGTGACT-AATTG-TCA  131
      ||||   |||||| |||| |||| |||||||||||||||| ||||| |||
seq2  CTAAATAAAAACTCCTCTCCAGGTTCATCTGTGTGTGACTAAATTGTTCA  150

seq1  TTGTA-GGGTCTC-TCTC-TCTCTCTCTGTGTCTGTGTGTGTGTGTGTGT  178
      ||||| ||||||| |||| |||||||||||||| | ||||| ||||||||
seq2  TTGTAGGGGTCTCTTCTCTTCTCTCTCTGTGTCCGGGTGTG-GTGTGTGT  199

seq1  GTGTGTGTGT-ATGTGTATGTGTCTGTGTGTCTGTGTG-AGTGTGTGTGT  226
      |||||||||| ||||||||||||||||||||||||||| |||||||||||
seq2  GTGTGTGTGTAATGTGTATGTGTCTGTGTGTCTGTGTGAAGTGTGTGTGT  249

seq1  GC-ATGTGTCTGTGTGTATGTGTGTGTGTCTGTGTGTGTGTTTGTGTGTG  275
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTGTCTGTGTGTATGTGTGTGTGTCTGTGTGTGTGTTTGTGTGTG  299

seq1  TGTCTGTGTGTGTGTCTGTGTGTGTGTGTCTGTCTGTCTATGTGTGTCTG  325
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTGTGTGTGTCTGTGTGTGTGTGTCTGTCTGTCTATGTGTGTCTG  349

seq1  TGTGAGTGTGTGTGTGCATGTGTCTGTGTGTATGTGTGTGTGTCTGTGTG  375
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTGTGTGTGTGCATGTGTCTGTGTGTATGTGTGTGTGTCTGTGTG  399

seq1  TGTGTGTGTCTGTGTGTGTGTCTGTGTGTGTGTGTCTGTATGTGTGTGTC  425
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTCTGTGTGTGTGTCTGTGTGTGTGTGTCTGTATGTGTGTGTC  449

seq1  TCTCTGTGTGTCTGTGTGTGTGTGTCTGTCTGTCTGTGTGTGTCTGTGTG  475
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGTGTCTGTGTGTGTGTGTCTGTCTGTCTGTGTGTGTCTGTGTG  499

seq1  TGTGTTTTACATTTTTATTTACTATTACATGGTGCACATTAGGGGCTGAG  525
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTACATTTTTATTTACTATTACATGGTGCACATTAGGGGCTGAG  549

seq1  GTCAGAGGACACTTTCAGGAGTCAGGTCTCCCCTTCCACCACGTGAGCCT  575
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGGACACTTTCAGGAGTCAGGTCTCCCCTTCCACCACGTGAGCCT  599

seq1  AGAGAAATAAATGCAGATAATCAAGTTTGGCAGCAAGTGCCTTTATGCAT  625
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATAAATGCAGATAATCAAGTTTGGCAGCAAGTGCCTTTATGCAT  649

seq1  GAAGCCCTCTTGCCTGGCCCCACTGTTGGATTCTTAGGCAGGGATAGAGC  675
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCCTCTTGCCTGGCCCCACTGTTGGATTCTTAGGCAGGGATAGAGC  699

seq1  AAAATATGGAAAATGGCAGATATAGTACCCAACGTGAACGTTTACACAGT  725
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGGAAAATGGCAGATATAGTACCCAACGTGAACGTTTACACAGT  749

seq1  ACACAATAATAAACCAGATACATCACTTTAAAGCGCTCTGGATCACCAAA  775
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATAATAAACCAGATACATCACTTTAAAGCGCTCTGGATCACCAAA  799

seq1  AACCCAAGAATAACTCATGTCTGCAAAATGCTGTTTCCCAAATTGATGGC  825
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAAGAATAACTCATGTCTGCAAAATGCTGTTTCCCAAATTGATGGC  849

seq1  TTACATTCATGTTGACGCACGTTCTCTCTCTCCATGTACTGACGCCATGG  875
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTCATGTTGACGCACGTTCTCTCTCTCCATGTACTGACGCCATGG  899

seq1  CCATTTCTAACTGTGTAAAAGCTAGACACTCGAGCTCGGCTCGCTTCACC  925
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCTAACTGTGTAAAAGCTAGACACTCGAGCTCGGCTCGCTTCACC  949

seq1  AGCCACTGCAAAGTGTCTATCAGATGGCTATTAATAAACTTGGTTTCTGC  975
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACTGCAAAGTGTCTATCAGATGGCTATTAATAAACTTGGTTTCTGC  999

seq1  TGAGGTCAAATCCGGTAAAAGAACAGACGAGCCAAGTCTCCCCTCCCCCA  1025
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCAAATCCGGTAAAAGAACAGACGAGCCAAGTCTCCCCTCCCCCA  1049

seq1  CCCTTTTCATTTTGAACCAGTTTAAACCACTTCATTC-TTAGATGAAGAG  1074
      |||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  CCCTTTTCATTTTGAACCAGTTTAAACCACTTCATTCGGTAGATGAAGAG  1099

seq1  AATTC  1079
      |||||
seq2  AATTC  1104

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Alignment Information