BAC Information

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BAC

Clone NameB6Ng01-197F12
Chromosome12 (Build37)
Map Location 98,892,223 - 98,893,350
singlet/doubletsinglet
Overlap genenone
Upstream geneEG628277, LOC382626
Downstream geneLOC100039743, LOC667732, LOC628351, LOC100039770, LOC667746, Galc, Gpr65, Kcnk10, Spata7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197F12.bB6Ng01-197F12.g
ACCGA019233GA019234
length9091,131
definitionB6Ng01-197F12.b B6Ng01-197F12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatctttatttagtgcatttggtgttctgattattatgtgtcgg
gaagaatttcttttctggtccagtctatttggagttctgtaggcttcttg
tatgttcatgggcatctctttctttagatttgggaagttttcttcaataa
ttttgttgaagatgtttgatggtcctttgagttgaaaatcttcattctca
tccactcctattatccgtaggtttggtcttctcattgtgtcctggatttc
ctggatgttttgagttaggatctttttgcattttccattttctttgattg
ttgtgccgatgttctctatggagtcttctgcacctgagattctctcttcc
atctcttgtattctgttgctgatgctcgcatctatggttccagatttctt
tcctagggtttctatctccagcgtcgcctcactttgggttttctttattg
tgtctacttccctttttaggtctagtatggttttgttcattttcatcacc
tgtttggatgtgttttcctgtttttctataaggacttctacctgtttggt
tgtgttttcctgtttttctttaaggacttgtaactctttagcagtgtttt
cctgtttttctttaaggacttgtaactctttagcagtgttctcctgtatt
tctttaagtgagttattgaattccttctttatgtcctctaccatcatcat
gagatatgcttttaaatccaggtctaccttttcaggtgtgttagggtgtc
ctggattgggcgaagtgggcgttctgggttctgatgatggtgagtggtcc
tggcttctgttagtagattcttacgtttaccttttgccatctggcaatct
ctggagttagttgttatagttgtctttgttagagattgtttcttctgttg
attttgtta

gaattcacttgcttctgcatatctccattcattagttaaatccagtactc
acctttaaacaataatttgataagccaatacttctcttgtggttttgtat
atctgtgtgattgtatttgtgtgtatgcacttgtgtggaggtgtgtatgc
acacgtgtggttagggagcatgtggtgggcagatgtcaatgctgagtgtc
tttctcaattgcttactgccatcttttttgagatggagtctctcactgca
ccgggagcttactgatttggataggcgagttgcctcacacccctcaggga
tcctcttacctttgtttccccaagacttggattacagggacagatattca
tgccccagctttttacacagttactgcagatctgaacacaactcttaatg
ctcaagtaaaagcactttatcaacttagctatctgtctaaaccctttcat
ataagcttgttgagttgtatttacaacttcgagttttaaatacttttttg
tttgcttccttgattccttctgtgacagggtcttcctctgtcacccaggc
ctcataaaactcattaggaagtccaagatggtcttgaacttgtagcttta
ccttccgaagtactgagactctgcacatgaatttcagaatttagctccaa
atagaacttttaatttaggttctacctatacatctatttaaccatttgtg
tgtgtgtgtgtgtgtgtgtgtctgacagcttaatacttatacttatccaa
aggaaacaaatgatactccttctgattgagtaatatgttactattagaac
aaagatgaagagggttgatggcttgcaagtcatacagctgtgaacgcatc
caccgaatcctaatttctggagtagtaaatgagacaagaatgtcataata
gcttttatacatttattaggcagtcgggttaatgcttttgggtatatcca
gctgttattttcttaggacattgaatacaagtttaataaagcaaagacaa
tataaacaactaaaatgagggaggtattattcttccattctttaatgtag
atactatatcatagtgatcatgggaagtgtcataattactgcctttacat
tcgatgaggcaactctaaggcatggtaccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_98892223_98893350
seq2: B6Ng01-197F12.g_65_1195 (reverse)

seq1  TGGGTA-CATGCCTATGAGTTTGCTTCATCGGATGTAAA-GCAGTAATTA  48
      |||||| |||||||  ||| |||| |||||| ||||||| ||||||||||
seq2  TGGGTACCATGCCTTAGAG-TTGCCTCATCGAATGTAAAGGCAGTAATTA  49

seq1  TGACACTTCCATTGATCACTATGATATAGTATCTACA-TAAAG-ATGGGA  96
      ||||||||||  ||||||||||||||||||||||||| ||||| |||| |
seq2  TGACACTTCCCATGATCACTATGATATAGTATCTACATTAAAGAATGGAA  99

seq1  GAAT-ATACCTCCCTTCATTTTTAGTTGTTTATATTGTCTTTGCTTTATT  145
      |||| ||||||||| ||| |||||||||||||||||||||||||||||||
seq2  GAATAATACCTCCC-TCA-TTTTAGTTGTTTATATTGTCTTTGCTTTATT  147

seq1  AAACTTGTATTCAAATGTCCTAAGAAAATAACAGCTGGATATACCCAAAA  195
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAACTTGTATTC-AATGTCCTAAGAAAATAACAGCTGGATATACCCAAAA  196

seq1  GCATTAACCCGACTGCCTAATAAATGTAT-AAAGCTATTATGACATTCTT  244
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCATTAACCCGACTGCCTAATAAATGTATAAAAGCTATTATGACATTCTT  246

seq1  GTCTCATTTACTACTCCAG-AATTAGGATTCGGTGGATGCGTTCACAGCT  293
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTCTCATTTACTACTCCAGAAATTAGGATTCGGTGGATGCGTTCACAGCT  296

seq1  GTATGACTTGCAAGCCATCAACCCTCTTCATCTTTGTTCTAATAGTAACA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGACTTGCAAGCCATCAACCCTCTTCATCTTTGTTCTAATAGTAACA  346

seq1  TATTACTCAATCAGAAGGAGTATCATTTGTTTCCTTTGGATAAGTATAAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTCAATCAGAAGGAGTATCATTTGTTTCCTTTGGATAAGTATAAG  396

seq1  TATTAAGCTGTCAGACACACACACACACACACACACACAAATGGTTAAAT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGCTGTCAGACACACACACACACACACACACACAAATGGTTAAAT  446

seq1  AGATGTATAGGTAGAACCTAAATTAAAAGTTCTATTTGGAGCTAAATTCT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTATAGGTAGAACCTAAATTAAAAGTTCTATTTGGAGCTAAATTCT  496

seq1  GAAATTCATGTGCAGAGTCTCAGTACTTCGGAAGGTAAAGCTACAAGTTC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCATGTGCAGAGTCTCAGTACTTCGGAAGGTAAAGCTACAAGTTC  546

seq1  AAGACCATCTTGGACTTCCTAATGAGTTTTATGAGGCCTGGGTGACAGAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCATCTTGGACTTCCTAATGAGTTTTATGAGGCCTGGGTGACAGAG  596

seq1  GAAGACCCTGTCACAGAAGGAATCAAGGAAGCAAACAAAAAAGTATTTAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCCTGTCACAGAAGGAATCAAGGAAGCAAACAAAAAAGTATTTAA  646

seq1  AACTCGAAGTTGTAAATACAACTCAACAAGCTTATATGAAAGGGTTTAGA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCGAAGTTGTAAATACAACTCAACAAGCTTATATGAAAGGGTTTAGA  696

seq1  CAGATAGCTAAGTTGATAAAGTGCTTTTACTTGAGCATTAAGAGTTGTGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGCTAAGTTGATAAAGTGCTTTTACTTGAGCATTAAGAGTTGTGT  746

seq1  TCAGATCTGCAGTAACTGTGTAAAAAGCTGGGGCATGAATATCTGTCCCT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATCTGCAGTAACTGTGTAAAAAGCTGGGGCATGAATATCTGTCCCT  796

seq1  GTAATCCAAGTCTTGGGGAAACAAAGGTAAGAGGATCCCTGAGGGGTGTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCCAAGTCTTGGGGAAACAAAGGTAAGAGGATCCCTGAGGGGTGTG  846

seq1  AGGCAACTCGCCTATCCAAATCAGTAAGCTCCCGGTGCAGTGAGAGACTC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACTCGCCTATCCAAATCAGTAAGCTCCCGGTGCAGTGAGAGACTC  896

seq1  CATCTCAAAAAAGATGGCAGTAAGCAATTGAGAAAGACACTCAGCATTGA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAAAAAAGATGGCAGTAAGCAATTGAGAAAGACACTCAGCATTGA  946

seq1  CATCTGCCCACCACATGCTCCCTAACCACACGTGTGCATACACACCTCCA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCCCACCACATGCTCCCTAACCACACGTGTGCATACACACCTCCA  996

seq1  CACAAGTGCATACACACAAATACAATCACACAGATATACAAAACCACAAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTGCATACACACAAATACAATCACACAGATATACAAAACCACAAG  1046

seq1  AGAAGTATTGGCTTATCAAATTATTGTTTAAAGGTGAGTACTGGATTTAA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTATTGGCTTATCAAATTATTGTTTAAAGGTGAGTACTGGATTTAA  1096

seq1  CTAATGAATGGAGATATGCAGAAGCAAGTGAATTC  1128
      |||||||||||||||||||||||||||||||||||
seq2  CTAATGAATGGAGATATGCAGAAGCAAGTGAATTC  1131


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