BAC Information

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BAC

Clone NameB6Ng01-197L08
Chromosome12 (Build37)
Map Location 94,330,993 - 94,332,133
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039425, LOC628116
Downstream gene2610022K04Rik-ps, EG633639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197L08.bB6Ng01-197L08.g
ACCGA019502GA019503
length1,2031,126
definitionB6Ng01-197L08.b B6Ng01-197L08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcctattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagagcaagccattgctgtt
ctgttcaggaatctttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtgcaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
cctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtaaattgcttttggcaagatagccattt
ttacaatgttaatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatcttttacttccttagttagagtcacgccgagatatttttatatta
ttgtgactattgagaacggtgttgtttcccctaatttctttctcagcctg
cttattctttgtgtagagaaaggccattgacttgttgagtatttatatcc
agctacttcacaaagctgttatcagttaggagttcctctggtgaatctag
gtcacttaattatctatcatatcatctgcctaagtgaattgaacttccgt
tcattgatcccattgatccttggttgtcgaattggcttcgtgccaaaaat
cac

gaattctcttcccctaaaaatcactttgaaaacagacagaagaaaggcca
atgggccttaaccccaagacagacaactaaagaggagtacgtgggaaaac
tactcttcctaagggagatcataacaattggtcatcaaataccaaaatgg
gcagccctgaagcatatcttcaagtagcataatatagactgagacagtta
tatttagccctatgtatgtgttttcatgtatacataagtagtaacagctc
atgaagaaaagttcataatttgacagagcaaggagggctatgtagaaggt
ttagtgcgaggtaaaggaaggggtaagcactgtttttatattatgaattt
aaaaataaaataggaaaaattgctattaagaagcaaaacaaatcatcacc
tagaagcaaagtcatcatgagtcatcaactaagcctcatcccttctcttt
ctactgtgggtactccatacaaccatgtcagcattctacagcaactgaga
caggatgaagaaatcccgattgcaggtatttccaacatttgaaatgtgcc
ggccatgctatgattgttcaggcttcttagtagaaagatatggactgagt
tgttttgtgtgaagaaagtattttgccattctttgatttgactctgagtt
ctgagttgaacatagaattttctggaatattggctatgctgtcttaaaat
ccttttcccaaacatgcgactggacaacctctctgcatttcagtttctaa
actaaggagggtttatggaagcaccacattctatagagtcaaggatttaa
cctcggttgtgttttcaaagtcagtctgcctttatattctaggtgtaaaa
tctggtcaggcatgtggtcactcttgcagacttttcttttgaagaacttc
ccatggatgtacttttctgcacatctatccttttacaagttttgatatct
atattctttgtgacatttttcttttagatcttcgggtacatgggaactag
gagaaatatagtattttcctctatgcccttgacttcagtttctctacccc
tgctgatttcttctctctcgtcccaccacccccacttttttttggttgag
caagttagccatacatgagaagagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_94330993_94332133
seq2: B6Ng01-197L08.g_65_1190

seq1  GAATTCTCTTCCCCTAAAAATCACTTTGAAAACAGACAGAAGAAAGGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCCCCTAAAAATCACTTTGAAAACAGACAGAAGAAAGGCCA  50

seq1  ATGGGCCTTAACCCCAAGACAGACAACTAAAGAGGAGTACGTGGGAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCCTTAACCCCAAGACAGACAACTAAAGAGGAGTACGTGGGAAAAC  100

seq1  TACTCTTCCTAAGGGAGATCATAACAATTGGTCATCAAATACCAAAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTCCTAAGGGAGATCATAACAATTGGTCATCAAATACCAAAATGG  150

seq1  GCAGCCCTGAAGCATATCTTCAAGTAGCATAATATAGACTGAGACAGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCCTGAAGCATATCTTCAAGTAGCATAATATAGACTGAGACAGTTA  200

seq1  TATTTAGCCCTATGTATGTGTTTTCATGTATACATAAGTAGTAACAGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGCCCTATGTATGTGTTTTCATGTATACATAAGTAGTAACAGCTC  250

seq1  ATGAAGAAAAGTTCATAATTTGACAGAGCAAGGAGGGCTATGTAGAAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAAAAGTTCATAATTTGACAGAGCAAGGAGGGCTATGTAGAAGGT  300

seq1  TTAGTGCGAGGTAAAGGAAGGGGTAAGCACTGTTTTTATATTATGAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGCGAGGTAAAGGAAGGGGTAAGCACTGTTTTTATATTATGAATTT  350

seq1  AAAAATAAAATAGGAAAAATTGCTATTAAGAAGCAAAACAAATCATCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAAATAGGAAAAATTGCTATTAAGAAGCAAAACAAATCATCACC  400

seq1  TAGAAGCAAAGTCATCATGAGTCATCAACTAAGCCTCATCCCTTCTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCAAAGTCATCATGAGTCATCAACTAAGCCTCATCCCTTCTCTTT  450

seq1  CTACTGTGGGTACTCCATACAACCATGTCAGCATTCTACAGCAACTGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTGGGTACTCCATACAACCATGTCAGCATTCTACAGCAACTGAGA  500

seq1  CAGGATGAAGAAATCCCGATTGCAGGTATTTCCAACATTTGAAATGTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGAAGAAATCCCGATTGCAGGTATTTCCAACATTTGAAATGTGCC  550

seq1  GGCCATGCTATGATTGTTCAGGCTTCTTAGTAGAAAGATATGGACTGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGCTATGATTGTTCAGGCTTCTTAGTAGAAAGATATGGACTGAGT  600

seq1  TGTTTTGTGTGAAGAAAGTATTTTGCCATTCTTTGATTTGACTCTGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTGTGAAGAAAGTATTTTGCCATTCTTTGATTTGACTCTGAGTT  650

seq1  CTGAGTTGAACATAGAATTTTCTGGAATATTGGCTATGCTGTCTTAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTGAACATAGAATTTTCTGGAATATTGGCTATGCTGTCTTAAAAT  700

seq1  CCTTTTCCCAAACATGCGACTGGACAACCTCTCTGCATTTCAGTTTCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCCCAAACATGCGACTGGACAACCTCTCTGCATTTCAGTTTCTAA  750

seq1  ACTAAGGAGGGTTTATGGAAGCACCACATTCTATAGAGTCAAGGATTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGAGGGTTTATGGAAGCACCACATTCTATAGAGTCAAGGATTTAA  800

seq1  CCTCGGTTGTGTTTTCAAAGTCAGTCTGCCTTTATATTCTAGGTGTAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGTTGTGTTTTCAAAGTCAGTCTGCCTTTATATTCTAGGTGTAAAA  850

seq1  TCTGGTCAGGCATGTGGTCACTCTTGCAGACTTTTCTTTTGAAGAAACTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||  ||
seq2  TCTGGTCAGGCATGTGGTCACTCTTGCAGACTTTTCTTTTGAAGAACTTC  900

seq1  CCATGGATGTACTTTTCTGCACATCTATCCTTTTACAAGTTTTGATATCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGATGTACTTTTCTGCACATCTATCCTTTTACAAGTTTTGATATCT  950

seq1  AATATTCTTTGTGACATTTTTCTTTTAGATCTTCGGGTACATGGGAACTA  1000
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -ATATTCTTTGTGACATTTTTCTTTTAGATCTTCGGGTACATGGGAACTA  999

seq1  AGAGAAAATATAAGTTATTTTCTCTATGCCCTTGACTTCAGTTTCTCTAC  1050
       ||| |||||| |||  ||| |||||||||||||||||||||||||||||
seq2  GGAG-AAATAT-AGTATTTTCCTCTATGCCCTTGACTTCAGTTTCTCTAC  1047

seq1  CCCTGCTGAATTTTTCTTTCTCTCCTTCCCACCCACCCCCACTTTTTTTT  1100
      ||||||||| || |||| |||   | ||||| ||||||||||  ||||||
seq2  CCCTGCTGATTTCTTCTCTCT---CGTCCCA-CCACCCCCAC--TTTTTT  1091

seq1  TTGGTTGGAGCAAAGTTTAGCACAAAAACATGAGAGGAGAA  1141
      |||||| ||||||   |||||    | |||||||| |||||
seq2  TTGGTT-GAGCAA--GTTAGC---CATACATGAGAAGAGAA  1126


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