BAC Information

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BAC

Clone NameB6Ng01-197O02
Chromosome12 (Build37)
Map Location 9,998,750 - 10,131,149
singlet/doubletdoublet
Overlap geneLOC382567
Upstream geneWdr35, Ttc32, LOC633030, LOC100042238, Osr1
Downstream geneNt5c1b, Rdh14, LOC238074, LOC100042308, EG668435, Kcns3, LOC628276
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197O02.bB6Ng01-197O02.g
ACCGA019626GA019627
length2311,121
definitionB6Ng01-197O02.b B6Ng01-197O02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,130,919 - 10,131,149)(9,998,750 - 9,999,866)
sequence
tcaaagcaaacagttgaggtgagttgtgaagagcaggttctgatgtggcc
actgaggtaagaatacctcaagcaaaggagaaaagatcattggctaaaat
ttactatggttttggaaggtaggaaggaaggcagtggggttttgatttgt
cttgtcttttaggacagtgtaggggaacgccaggacaggcaagcaggagt
ggtgggttggtgagcaggaggagggggaatg
gaattccattggaataaaaaccaagagatgggataagcctagaagtagta
gattttttttcctactgtttggtcatcagcataacaatgtcaattctcaa
tctagtcctggccaacacgtctgccacctttcttttttagtctgaacata
ttggaactaagtctattgtgaagatcatggtttcagtgccaagttatgct
tagaaggattttcatcacacatggttaatgtttttaggaagttttgacat
ttaaatccataggctttaattacttggaatatttattgtaatgaatactt
cattccctggtggcaataaatgaatgagacacctcctgcattgcaccttt
ggggatttagatgttagaaagtagagtatgttccatttggcaatgcaaaa
agtgtgtgtgctgtttgttttgttgctatgtggactattcagtcccagga
taccttggcctggaaagaagccatgctgagtgacaggactacataattct
accttctcagtaagctgtcttgggcctcagtgacctcagtgttcccagct
cagggatctgtacatcaagaggcctatgagcctcgcagtattcattttgg
tctgtccttaagccaagagcttttacagaagcctgagtacgatgcttcct
gcccaaacaacaatgactgtcatagaagcagtccatctttgctcccaact
gcagctcctgatgaaagagatgggatatagagtcttcccacaggaaaagc
aatgggaacaatccctttacaggtggaggtttctggctcaaacaaggact
caaaatgaagctagccattggaaatttcattcaggccagttcaagcacta
tgaagtacagcaacttgagaactttccccattaagtgatcaagtccaatt
tctatctgtgtccttcttccacagcaggaagcagtgagagcttcagtggg
ttgccttccttgtatagagctctgtcagagagtataagtgaaagattgtt
ctcaagagctcttattcctgaacctcatgtggtttgtgatcctgcttctg
gaagaagcaaagtcacacacaacatccactccctgacaggcaactggtga
atggagtggtcagcttgcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_10130919_10131149
seq2: B6Ng01-197O02.b_51_281 (reverse)

seq1  CATTCCCCCTCCTCCTGCTCACCAACCCACCACTCCTGCTTGCCTGTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCCCCTCCTCCTGCTCACCAACCCACCACTCCTGCTTGCCTGTCCT  50

seq1  GGCGTTCCCCTACACTGTCCTAAAAGACAAGACAAATCAAAACCCCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTTCCCCTACACTGTCCTAAAAGACAAGACAAATCAAAACCCCACTG  100

seq1  CCTTCCTTCCTACCTTCCAAAACCATAGTAAATTTTAGCCAATGATCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTCCTACCTTCCAAAACCATAGTAAATTTTAGCCAATGATCTTT  150

seq1  TCTCCTTTGCTTGAGGTATTCTTACCTCAGTGGCCACATCAGAACCTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTGCTTGAGGTATTCTTACCTCAGTGGCCACATCAGAACCTGCT  200

seq1  CTTCACAACTCACCTCAACTGTTTGCTTTGA  231
      |||||||||||||||||||||||||||||||
seq2  CTTCACAACTCACCTCAACTGTTTGCTTTGA  231

seq1: chr12_9998750_9999866
seq2: B6Ng01-197O02.g_65_1185

seq1  GAATTCCATTGGAATAAAAACCAAGAGATGGGATAAGCCTAGAAGTAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTGGAATAAAAACCAAGAGATGGGATAAGCCTAGAAGTAGTA  50

seq1  GATTTTTTTTCCTACTGTTTGGTCATCAGCATAACAATGTCAATTCTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTTTCCTACTGTTTGGTCATCAGCATAACAATGTCAATTCTCAA  100

seq1  TCTAGTCCTGGCCAACACGTCTGCCACCTTTCTTTTTTAGTCTGAACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTCCTGGCCAACACGTCTGCCACCTTTCTTTTTTAGTCTGAACATA  150

seq1  TTGGAACTAAGTCTATTGTGAAGATCATGGTTTCAGTGCCAAGTTATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACTAAGTCTATTGTGAAGATCATGGTTTCAGTGCCAAGTTATGCT  200

seq1  TAGAAGGATTTTCATCACACATGGTTAATGTTTTTAGGAAGTTTTGACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGATTTTCATCACACATGGTTAATGTTTTTAGGAAGTTTTGACAT  250

seq1  TTAAATCCATAGGCTTTAATTACTTGGAATATTTATTGTAATGAATACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCCATAGGCTTTAATTACTTGGAATATTTATTGTAATGAATACTT  300

seq1  CATTCCCTGGTGGCAATAAATGAATGAGACACCTCCTGCATTGCACCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCCTGGTGGCAATAAATGAATGAGACACCTCCTGCATTGCACCTTT  350

seq1  GGGGATTTAGATGTTAGAAAGTAGAGTATGTTCCATTTGGCAATGCAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATTTAGATGTTAGAAAGTAGAGTATGTTCCATTTGGCAATGCAAAA  400

seq1  AGTGTGTGTGCTGTTTGTTTTGTTGCTATGTGGACTATTCAGTCCCAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTGTGCTGTTTGTTTTGTTGCTATGTGGACTATTCAGTCCCAGGA  450

seq1  TACCTTGGCCTGGAAAGAAGCCATGCTGAGTGACAGGACTACATAATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTGGCCTGGAAAGAAGCCATGCTGAGTGACAGGACTACATAATTCT  500

seq1  ACCTTCTCAGTAAGCTGTCTTGGGCCTCAGTGACCTCAGTGTTCCCAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTCAGTAAGCTGTCTTGGGCCTCAGTGACCTCAGTGTTCCCAGCT  550

seq1  CAGGGATCTGTACATCAAGAGGCCTATGAGCCTCGCAGTATTCATTTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATCTGTACATCAAGAGGCCTATGAGCCTCGCAGTATTCATTTTGG  600

seq1  TCTGTCCTTAAGCCAAGAGCTTTTACAGAAGCCTGAGTACGATGCTTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCTTAAGCCAAGAGCTTTTACAGAAGCCTGAGTACGATGCTTCCT  650

seq1  GCCCAAACAACAATGACTGTCATAGAAGCAGTCCATCTTTGCTCCCAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAACAACAATGACTGTCATAGAAGCAGTCCATCTTTGCTCCCAACT  700

seq1  GCAGCTCCTGATGAAAGAGATGGGATATAGAGTCTTCCCACAGGAAAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTCCTGATGAAAGAGATGGGATATAGAGTCTTCCCACAGGAAAAGC  750

seq1  AATGGGAACAATCCCTTTACAGGTGGAGGTTTCTGGCTCAAACAAGGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAACAATCCCTTTACAGGTGGAGGTTTCTGGCTCAAACAAGGACT  800

seq1  CAAAATGAAGCTAGCCATTGGAAATTTCATTCAGGCCAGTTCAAGCACTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGAAGCTAGCCATTGGAAATTTCATTCAGGCCAGTTCAAGCACTA  850

seq1  TGAAGTACAGCAACTTGAGAACTTTCCCCATTAAGTGATCAAGTCCAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTACAGCAACTTGAGAACTTTCCCCATTAAGTGATCAAGTCCAATT  900

seq1  TCTATCTGTGTCCTTCTTCCACAGCAGGAAGCAGTGAGAGCTTCAGT-GG  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCTATCTGTGTCCTTCTTCCACAGCAGGAAGCAGTGAGAGCTTCAGTGGG  950

seq1  TTGCCTTCCTTGTATAGAGCTCCTGTCAGAGAGTAT-AGTGATAGATTGT  998
      ||||||||||||||||||||| |||||||||||||| ||||| |||||||
seq2  TTGCCTTCCTTGTATAGAGCT-CTGTCAGAGAGTATAAGTGAAAGATTGT  999

seq1  TCCTCAGGAGCTCTTATTCCTG-ACCTCATGTGGTTTGTGAT-CTGC-TC  1045
      | |||| ||||||||||||||| ||||||||||||||||||| |||| ||
seq2  T-CTCAAGAGCTCTTATTCCTGAACCTCATGTGGTTTGTGATCCTGCTTC  1048

seq1  TGGAAG-AGCAGAGTCACACACAAACACCACTCCCTGAACAAGGCAACCT  1094
      |||||| |||| ||||||||||||   |||||||||||   |||||||  
seq2  TGGAAGAAGCAAAGTCACACACAACATCCACTCCCTGA--CAGGCAACTG  1096

seq1  GTG-ATGGAGTGGTCAGC-TGCCTG  1117
      ||| |||||||||||||| ||||||
seq2  GTGAATGGAGTGGTCAGCTTGCCTG  1121