BAC Information

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BAC

Clone NameB6Ng01-200D07
Chromosome12 (Build37)
Map Location 72,835,237 - 72,978,738
singlet/doubletdoublet
Overlap geneDaam1, LOC666213
Upstream geneFrmd6, Actr10, Psma3, 3110056K07Rik, Arid4a, Timm9, LOC100041035, 2700049A03Rik, LOC666162, Dact1, LOC100041190
Downstream geneLOC666220, Gpr135, LOC100041239, 2810055F11Rik, 1200003C05Rik, 4930403N07Rik, Rtn1, Lrrc9, 1810048J11Rik, LOC209183, LOC100041323, Dhrs7, LOC100041157, 5033425G24Rik, Ppm1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200D07.bB6Ng01-200D07.g
ACCGA021334GA021335
length714887
definitionB6Ng01-200D07.b B6Ng01-200D07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,978,029 - 72,978,738)(72,835,237 - 72,836,119)
sequence
gaattcacttagtaactgagaagtcaggcttcttaggtcttccttataaa
gccatagaactggcagacactgcatcctgttgtgcagacccaatcttgag
caagcatgcaaacacagacatgggcagtgaagatgcccctttctaaaggg
gcatcacatggaagcagacagctgatcacaaatgataccagcaaacactg
gtaaacaattgttaaaataagaagaaaattaacatgcaaataaaaggcag
gtataactttcaaagacctcaaaatagcgaagtgaagaagacatctgggc
tttacatttcaaggaagccctcagcccacttgaagatatgacaggaaaac
cgtgcttacctctaaacacaacgcctcttcctccctgggctccaagtctt
gttttcacgttgaagtcattggctaccttacaggttctagtttctatccc
ataagaataatccctcaggacagtctgcttgaatcaggtgtcccttttgg
tccacatcaaagagaattttgataaatgctctccccaggacgctggcctt
tagttggggtcactgcttttagaaacatggagctgccttacttagggagt
gtccggtaaagcccagtggaaaatattctgattaacaactgtacctgctt
catactggaaaatcaaccaggatggatgccaacagatatctgaatctaca
ttaaagacacacac
gaattctcactatctaaccctaaaactggagtatggcatgggtatatttt
catcagaaaaggaaatacacccatagaagtttcttgtttagcatctgtgg
aggtttctccatgctgaccagctttcagatgccagtggaaccccagtgat
gttattcaattcaagcatgacactgcttggtgttaatgcagaccccatat
gtaaggggctcagttccatgagtcccccactcccacttcagatgccactt
atgcaaagtggtccattacccaccactgtcccacttggctacagatcagt
tccccataagcttctcctcagtttcaactgcttgcagaatggttcacaga
actcaggaaatgtgtctcctggttttctatagatggtgttgcaaagggtt
catgcacagagcctcataaaccaaggactgcaaggcaggaaggggagcct
ccactccatcttctttagatgccgtcctctgtgtgttccgtggtgtggag
attcccttagaccatagctcccatgtgtctggaggcttcatcacactgtt
gccatcaattattagcccatctctagcccttccccctttttcataattgc
ataaaggatgtgtggctaaacactttactacaacttagcctgactgatga
tctggtcctgaagctaccaagattcacttcattaggaaaaaaaaaaaaaa
agctgctctttttactgaggaaattgcacagaaccagcgattccacacct
ggcacccaagactacattctgaatatcagacgaacttgggcatttcatcg
ctcagaaattgccagagatcactgagcctgtattagtacagaagggcaga
gctcagttcccttctttctatgtacatctacctgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_72978029_72978738
seq2: B6Ng01-200D07.b_48_761 (reverse)

seq1  GTGTGTGTCTTT-ATGTTGATTCAG-TGTCTGTTGGCATCCATCCTGGTT  48
      |||||||||||| |||| ||||||| | ||||||||||||||||||||||
seq2  GTGTGTGTCTTTAATGTAGATTCAGATATCTGTTGGCATCCATCCTGGTT  50

seq1  GATTTTCCAGTATG-AGCAGGTACAGTTGTTAATCAGAATATTTTCCACT  97
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GATTTTCCAGTATGAAGCAGGTACAGTTGTTAATCAGAATATTTTCCACT  100

seq1  GGGCTTTACCGGACACTCCCT-AGTAAGGCAGCTCCATGTTTCTAAAAGC  146
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGGCTTTACCGGACACTCCCTAAGTAAGGCAGCTCCATGTTTCTAAAAGC  150

seq1  AGTGACCCCAACTAAAGGCCAGCGTCCTGGGGAGAGCATTTATCAAAATT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACCCCAACTAAAGGCCAGCGTCCTGGGGAGAGCATTTATCAAAATT  200

seq1  CTCTTTGCTGTGGACCAAAAGGGACACCTGATTCAAGCAGACTGTCCTGA  246
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGATGTGGACCAAAAGGGACACCTGATTCAAGCAGACTGTCCTGA  250

seq1  GGGATTATTCTTATGGGATAGAAACTAGAACCTGTAAGGTAGCCAATGAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTATTCTTATGGGATAGAAACTAGAACCTGTAAGGTAGCCAATGAC  300

seq1  TTCAACGTGAAAACAAGACTTGGAGCCCAGGGAGGAAGAGGCGTTGTGTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACGTGAAAACAAGACTTGGAGCCCAGGGAGGAAGAGGCGTTGTGTT  350

seq1  TAGAGGTAAGCACGGTTTTCCTGTCATATCTTCAAGTGGGCTGAGGGCTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTAAGCACGGTTTTCCTGTCATATCTTCAAGTGGGCTGAGGGCTT  400

seq1  CCTTGAAATGTAAAGCCCAGATGTCTTCTTCACTTCGCTATTTTGAGGTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAAATGTAAAGCCCAGATGTCTTCTTCACTTCGCTATTTTGAGGTC  450

seq1  TTTGAAAGTTATACCTGCCTTTTATTTGCATGTTAATTTTCTTCTTATTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAGTTATACCTGCCTTTTATTTGCATGTTAATTTTCTTCTTATTT  500

seq1  TAACAATTGTTTACCAGTGTTTGCTGGTATCATTTGTGATCAGCTGTCTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATTGTTTACCAGTGTTTGCTGGTATCATTTGTGATCAGCTGTCTG  550

seq1  CTTCCATGTGATGCCCCTTTAGAAAGGGGCATCTTCACTGCCCATGTCTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATGTGATGCCCCTTTAGAAAGGGGCATCTTCACTGCCCATGTCTG  600

seq1  TGTTTGCATGCTTGCTCAAGATTGGGTCTGCACAACAGGATGCAGTGTCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCATGCTTGCTCAAGATTGGGTCTGCACAACAGGATGCAGTGTCT  650

seq1  GCCAGTTCTATGGCTTTATAAGGAAGACCTAAGAAGCCTGACTTCTCAGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTTCTATGGCTTTATAAGGAAGACCTAAGAAGCCTGACTTCTCAGT  700

seq1  TACTAAGTGAATTC  710
      ||||||||||||||
seq2  TACTAAGTGAATTC  714

seq1: chr12_72835237_72836119
seq2: B6Ng01-200D07.g_73_959

seq1  GAATTCTCACTATCTAACCCTAAAACTGGAGTATGGCATGGGTATATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTATCTAACCCTAAAACTGGAGTATGGCATGGGTATATTTT  50

seq1  CATCAGAAAAGGAAATACACCCATAGAAGTTTCTTGTTTAGCATCTGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGAAAAGGAAATACACCCATAGAAGTTTCTTGTTTAGCATCTGTGG  100

seq1  AGGTTTCTCCATGCTGACCAGCTTTCAGATGCCAGTGGAACCCCAGTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCTCCATGCTGACCAGCTTTCAGATGCCAGTGGAACCCCAGTGAT  150

seq1  GTTATTCAATTCAAGCATGACACTGCTTGGTGTTAATGCAGACCCCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTCAATTCAAGCATGACACTGCTTGGTGTTAATGCAGACCCCATAT  200

seq1  GTAAGGGGCTCAGTTCCATGAGTCCCCCACTCCCACTTCAGATGCCACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGGGCTCAGTTCCATGAGTCCCCCACTCCCACTTCAGATGCCACTT  250

seq1  ATGCAAAGTGGTCCATTACCCACCACTGTCCCACTTGGCTACAGATCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAGTGGTCCATTACCCACCACTGTCCCACTTGGCTACAGATCAGT  300

seq1  TCCCCATAAGCTTCTCCTCAGTTTCAACTGCTTGCAGAATGGTTCACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATAAGCTTCTCCTCAGTTTCAACTGCTTGCAGAATGGTTCACAGA  350

seq1  ACTCAGGAAATGTGTCTCCTGGTTTTCTATAGATGGTGTTGCAAAGGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGAAATGTGTCTCCTGGTTTTCTATAGATGGTGTTGCAAAGGGTT  400

seq1  CATGCACAGAGCCTCATAAACCAAGGACTGCAAGGCAGGAAGGGGAGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACAGAGCCTCATAAACCAAGGACTGCAAGGCAGGAAGGGGAGCCT  450

seq1  CCACTCCATCTTC-TTAGATGCCGTCCTCTGTGTGTTCCGTGGTGTGGAG  499
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCACTCCATCTTCTTTAGATGCCGTCCTCTGTGTGTTCCGTGGTGTGGAG  500

seq1  ATTCCCTTAGACCATAGCTCCCATGTGTCTGGAGGCTTCATCACACTGTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTTAGACCATAGCTCCCATGTGTCTGGAGGCTTCATCACACTGTT  550

seq1  GCCATCAATTATTAGCCCATCTCTAGCCCTTCCCCCTTTTTCATAATTGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCAATTATTAGCCCATCTCTAGCCCTTCCCCCTTTTTCATAATTGC  600

seq1  ATAAAGGATGTGTGGCTAAACAC-TTACTACAACTTAGCCTGACTGATGA  648
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATAAAGGATGTGTGGCTAAACACTTTACTACAACTTAGCCTGACTGATGA  650

seq1  TCTGGTCCTGAAGCTACCAAGATTCACTTCATTAGG--AAAAAAAAAAAA  696
      ||||||||||||||||||||||||||||||||||||  ||||||||||||
seq2  TCTGGTCCTGAAGCTACCAAGATTCACTTCATTAGGAAAAAAAAAAAAAA  700

seq1  AGCTGCTCTTTTTACTGAGGAAATTGCACAGAACCAGTGATTCCACACCT  746
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGCTGCTCTTTTTACTGAGGAAATTGCACAGAACCAGCGATTCCACACCT  750

seq1  GGCACCAAAGACTACATTCTGAATATCAGACGAACTT-GGCATTTCATCG  795
      |||||| |||||||||||||||||||||||||||||| ||||||||||||
seq2  GGCACCCAAGACTACATTCTGAATATCAGACGAACTTGGGCATTTCATCG  800

seq1  CTCAGGAAATTGCAAGAGATTAAGGAGCCTGTATTAGCACAG-AGGGCAG  844
      |||| |||||||| |||||| |  ||||||||||||| |||| |||||||
seq2  CTCA-GAAATTGCCAGAGATCACTGAGCCTGTATTAGTACAGAAGGGCAG  849

seq1  AGCCCAGTTCCCCTTCTTTCTATGTACATCTACCTGTGA  883
      ||| ||||| |||||||||||||||||||||||||||||
seq2  AGCTCAGTT-CCCTTCTTTCTATGTACATCTACCTGTGA  887