BAC Information

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BAC

Clone NameB6Ng01-200E21
Chromosome12 (Build37)
Map Location 68,531,739 - 68,532,795
singlet/doubletsinglet
Overlap genenone
Upstream geneMdga2
Downstream geneLOC100040745, LOC100040681
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200E21.bB6Ng01-200E21.g
ACCGA021406GA021407
length1,0531,215
definitionB6Ng01-200E21.b B6Ng01-200E21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaagcatgacagggcaccgaggacaaggagctaaaacagggac
aaattaaggaacaggcatggcgagctagtggtgatggcgagcatgacaaa
gccactgctaatatgaactgtgtttgtggttttcttttgtttttttcttg
acatttgcttttttaaaacaattttttattagctattttcttcatttaca
attcaaatgctatcctgaaagtatcctaaaccctcccccctccctgctcc
ctaacccacccactcccacttcctggctctggcattcccctgtattgggg
catataatttttgtaagaccaagggcctctcctccaaatgatggccggtt
aggccatcttctgctacatatgcagctagatacaagagctcaggaggtac
tggttagttcatattgttgttcctcctatagggttacagaccccttcagc
tccttaggtactttctctagctcctccattgggggccctgtgtgccatcc
aatagatgactgtgagcattcacttccgtatttcccaggccctggcatag
cctcacaagagacagctatatcagggtcatatcaacaaaatcttgctggc
atacatttgcttttaaaggcaaggaaccttgatgcaagtgctaaccaaag
gacacaaaatactaaggaaatcacaatctgaaggctaggtctttaaaatc
cttttagtagaactgagttaggaaaactgtgtctctgattaatgtaagat
gatttgctctccttacttcaactacagggtcccctaaccctccagagact
ttagaactcagggagtggggaggaggcatgactgcgcatggggtcgggta
gaggggtagggacatcctcttggagacagggttgggggaggactgggctg
aggaactgttggagggagaactgggagggggataatgactggactataaa
attaatttataaaaagatattttctttgaaaaaagacgatttccatatat
tccctgaagttacaagtactttactagtcctgcttacttaccttactttc
aga

gaattctgtggtacacctgtaatgtgctttatattataatattgcaaaga
attgcttcatcttactggagacatataaagaggaagtgccaggtgtaatt
tggaaaggtatctccataataaccattacttccaggaaatgtatcagtct
tttcagaactcttatcccttaatttccaaattctgtaaaatgaaacatac
tcatctgccagatttttatttatttatttatttatttttggtaactcgag
ggttacttctgataagtattgaagtttggttatacaaagaacaagtagat
agtttttattatttccttggcttgttgccaagtgatagaaatttttttct
ttaaacccttattgttatcgtggtgttcttcatttccttgtgccaatgga
ctggaaagctatatgagaccaaatatgagtaatatataatggaagcttct
ctttctgattgcctattgcagttgtataaataatagagttaattctgaac
tatcctgagtaaattcagcagtttctatatgcaaaataactatttgtgca
tactgagtaattctattaggagagccaagaaaaatctaataacaccatga
gaattgcatacaattctgatctttgaactgaagtatatgggctttgaatt
attttctttaattaatgtctgacttaaagcctctcattcacaatttcttt
gcatcagcaaaagatataaatgcttcaggaatttgtgctccctttacaat
acatgacaaacttcaattagttctttttctaaattgaagacaattgcttt
aggatatttgtgtactttctcccaaatacaagctctttgccaatcttcat
ttgattaaccataatgacataatcttagcatttagaatttgggcactaaa
atttcggccaggtctgttcctgaaccattgatgtagttagtctacattgt
ttgtaatacaaaaaacaaaccaaaacaaaaacaaaaaaaacgaaacaaaa
aaaaaacatttctatgacactatcttcctctacataatggagcacagtag
tagaatgagttgagggcaaaataatccaaattaaaatcaagtttgggaat
ctatggaaatcttacattagcatcttacaggctcttcttctggctagtta
gcactgcaatccgaccatctcctaccactggtctttgcagcatatatacc
attatcctgttagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_68531739_68532795
seq2: B6Ng01-200E21.b_48_1100

seq1  GAATTCACAAGCATGACAGGGCACCGAGGACAAGGAGCTAAAACAGGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAGCATGACAGGGCACCGAGGACAAGGAGCTAAAACAGGGAC  50

seq1  AAATTAAGGAACAGGCATGGCGAGCTAGTGGTGATGGCGAGCATGACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAGGAACAGGCATGGCGAGCTAGTGGTGATGGCGAGCATGACAAA  100

seq1  GCCACTGCTAATATGAACTGTGTTTGTGGTTTTCTTTTGTTTTTTTCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGCTAATATGAACTGTGTTTGTGGTTTTCTTTTGTTTTTTTCTTG  150

seq1  ACATTTGCTTTTTTAAAACAATTTTTTATTAGCTATTTTCTTCATTTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGCTTTTTTAAAACAATTTTTTATTAGCTATTTTCTTCATTTACA  200

seq1  ATTCAAATGCTATCCTGAAAGTATCCTAAACCCTCCCCCCTCCCTGCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATGCTATCCTGAAAGTATCCTAAACCCTCCCCCCTCCCTGCTCC  250

seq1  CTAACCCACCCACTCCCACTTCCTGGCTCTGGCATTCCCCTGTATTGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCCACCCACTCCCACTTCCTGGCTCTGGCATTCCCCTGTATTGGGG  300

seq1  CATATAATTTTTGTAAGACCAAGGGCCTCTCCTCCAAATGATGGCCGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAATTTTTGTAAGACCAAGGGCCTCTCCTCCAAATGATGGCCGGTT  350

seq1  AGGCCATCTTCTGCTACATATGCAGCTAGATACAAGAGCTCAGGAGGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATCTTCTGCTACATATGCAGCTAGATACAAGAGCTCAGGAGGTAC  400

seq1  TGGTTAGTTCATATTGTTGTTCCTCCTATAGGGTTACAGACCCCTTCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAGTTCATATTGTTGTTCCTCCTATAGGGTTACAGACCCCTTCAGC  450

seq1  TCCTTAGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGTGCCATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGTGCCATCC  500

seq1  AATAGATGACTGTGAGCATTCACTTCCGTATTTCCCAGGCCCTGGCATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATGACTGTGAGCATTCACTTCCGTATTTCCCAGGCCCTGGCATAG  550

seq1  CCTCACAAGAGACAGCTATATCAGGGTCATATCAACAAAATCTTGCTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAAGAGACAGCTATATCAGGGTCATATCAACAAAATCTTGCTGGC  600

seq1  ATACATTTGCTTTTAAAGGCAAGGAACCTTGATGCAAGTGCTAACCAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTGCTTTTAAAGGCAAGGAACCTTGATGCAAGTGCTAACCAAAG  650

seq1  GACACAAAATACTAAGGAAATCACAATCTGAAGGCTAGGTCTTTAAAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAAATACTAAGGAAATCACAATCTGAAGGCTAGGTCTTTAAAATC  700

seq1  CTTTTAGTAGAACTGAGTTAGGAAAACTGTGTCTCTGATTAATGTAAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGTAGAACTGAGTTAGGAAAACTGTGTCTCTGATTAATGTAAGAT  750

seq1  GATTTGCTCTCCTTACTTCAACTACAGGGTCCCCTAACCCTCCAGAGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGCTCTCCTTACTTCAACTACAGGGTCCCCTAACCCTCCAGAGACT  800

seq1  TTAGAACTCAGGGAGTGGGGAGGAGGCATGACTGCGCATGGGGTCGGGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACTCAGGGAGTGGGGAGGAGGCATGACTGCGCATGGGGTCGGGTA  850

seq1  GAGGGGTAGGGACATCCTCTTGGAGACAGGG-TGGGGGAGGACTGGGCTG  899
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAGGGGTAGGGACATCCTCTTGGAGACAGGGTTGGGGGAGGACTGGGCTG  900

seq1  AGGAACTGTTGGAGGGAGAACTGGGAGGGGGATAATGACTGGACTATAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTGTTGGAGGGAGAACTGGGAGGGGGATAATGACTGGACTATAAA  950

seq1  AATTAAATATAATAAAAAAGATA-TTTCTTTGAAAAAAGACGATTTCCTA  998
      | | |  |||    ||||||||| |||||||||||||||||||||||| |
seq2  ATTAATTTAT----AAAAAGATATTTTCTTTGAAAAAAGACGATTTCC-A  995

seq1  TATATTCCCTGAAGGTTAATAGTTACTTTACTAATCCTGTTTACTTA-CT  1047
      ||||||||||||| ||||  || |||||||||| ||||| ||||||| ||
seq2  TATATTCCCTGAA-GTTACAAG-TACTTTACTAGTCCTGCTTACTTACCT  1043

seq1  AACTTTCAGA  1057
       |||||||||
seq2  TACTTTCAGA  1053


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