BAC Information

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BAC

Clone NameB6Ng01-200F04
Chromosome12 (Build37)
Map Location 52,057,403 - 52,058,287
singlet/doubletsinglet
Overlap genenone
Upstream genePrkcm
Downstream geneLOC100039517, LOC636070, LOC100039525, 6030408C04Rik, Scfd1, LOC620390, LOC100039578, Coch, Strn3, Ap4s1, Hectd1, EG544864, LOC100039476, Heatr5a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200F04.bB6Ng01-200F04.g
ACCGA021416GA021417
length1,204888
definitionB6Ng01-200F04.b B6Ng01-200F04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatagggacccctctgtatgttctgtatgctgccactcattcatt
taacctcactttcacgtgaagccgaaatgaaattcaaatacatatgatta
tatttccaagtattacaggtcaggcataaaatgaatctgaagttggtagc
tacatccatatcttcctgagacagaaactgattcagttaagcaaaagcgt
agaaagctgcattgaaaacagttttacggtgtacttggtccactgtgggt
ctaggtaaggtaccgttccttcaggacccaagcatgcatgtgctaatagc
tttcattttcatggtgccccacaatggctgccctggaaagaattatggag
ccgaatgggagctcaaactcagacttctgaactcttaataaagttgcttt
ctattacactaaagaagaatttgatgaatattagtagtaataatttgcac
cttagtttttaatagatctagcaaatatagaaagcctgaaatggtcatag
aaatgaaaagaactataataaaccttaagattttaattttgtctggctaa
agttaaaaactcaggtgacggcagatgctggcgaggatgtggagaaagag
gaacactcctccattgctggtgggattgcaagcttgtacaaccactctgg
aaatcagtctggcagttcctcagaaaattggatatagttctaccggaaga
tccagcaattccactcctgggcatatacccagaagatgttccaacttata
ataaggacacatgttccactatgttcatagtagccttatttataatagcc
agatgctggaaagaacccagatgaccctcaacagaggaatggatatagaa
aatgtggtacattttacacagtggagtactactcagctattaaaaacaat
gaatttatgaaatcttagaaaatggatggatctggaagatgtcattctta
agtgagttacctaatcacaaaaggacacacatgatattgcactcacttga
taagtggattattaatcccagaagctctagaatccttcttagaatggagt
aacaaataccccatgtaggggtttacagaaacaagttcagaagctagagc
agtagatcacaatcaaagtacttccccactggggggtccatccgtacatc
ttcaagccgaatcctatggctagtcctaacagagaagcctgctgaacagg
gagc
gaattctcctgtgcatacatgatcaaaataaaaatcttgacaggatgaat
attggcccacttcctcttaatgcatattgagacacaaagctttactcgtg
atatgcaattctgtactcaggaaccatatatggtaaataagatagggcat
gttatatcttaatttttacaaacaagttacaaaatatcaggatattgaaa
ccttggggtagtgctttggaatacagtctggaggctgagaagaggaagcg
aaagcatgcatatttatggtagttaaaccatacagcatattaaaaaatta
ataatagctttaaaaacttcattccactccttcattcaaaaacttgggtc
tttaactactatcagcatctcctcatcagtatcgaagccgccatttgcac
aggagcatcactacatcatttacctgctgattggaggaataacttagacg
aattattttccatttgatttaagtggggaacatagcatgcaccatttctg
cttattttatgcacaagcatcataatatattaatcttgaaaactgtgaaa
tcgaagcatattttcaagaatgaggggttttttaagaactaaatgaagtc
agcacaggatcatcccatatgagaaaggagctcaccactgtcggaaaagg
atatgactctcgttcaagggggcgaagagcagagtggactccctaggcag
gaatatttcttgtagcatcactgcttcctcaagcatttctgcctttggga
caaagatcaaatgccacattctggtaaaacatcaacttttgttttttatc
aaacaaactcaaaaagagtctgtttgtttcttcaccatatcatctaacct
gtgtgattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_52057403_52058287
seq2: B6Ng01-200F04.g_68_955

seq1  GAATTCTCCTGTGCATACATGATCAAAATAAAAATCTTGACAGGATGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGTGCATACATGATCAAAATAAAAATCTTGACAGGATGAAT  50

seq1  ATTGGCCCACTTCCTCTTAATGCATATTGAGACACAAAGCTTTACTCGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCCCACTTCCTCTTAATGCATATTGAGACACAAAGCTTTACTCGTG  100

seq1  ATATGCAATTCTGTACTCAGGAACCATATATGGTAAATAAGATAGGGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAATTCTGTACTCAGGAACCATATATGGTAAATAAGATAGGGCAT  150

seq1  GTTATATCTTAATTTTTACAAACAAGTTACAAAATATCAGGATATTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATCTTAATTTTTACAAACAAGTTACAAAATATCAGGATATTGAAA  200

seq1  CCTTGGGGTAGTGCTTTGGAATACAGTCTGGAGGCTGAGAAGAGGAAGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGGTAGTGCTTTGGAATACAGTCTGGAGGCTGAGAAGAGGAAGCG  250

seq1  AAAGCATGCATATTTATGGTAGTTAAACCATACAGCATATTAAAAAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATGCATATTTATGGTAGTTAAACCATACAGCATATTAAAAAATTA  300

seq1  ATAATAGCTTTAAAAACTTCATTCCACTCCTTCATTCAAAAACTTGGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGCTTTAAAAACTTCATTCCACTCCTTCATTCAAAAACTTGGGTC  350

seq1  TTTAACTACTATCAGCATCTCCTCATCAGTATCGAAGCCGCCATTTGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTACTATCAGCATCTCCTCATCAGTATCGAAGCCGCCATTTGCAC  400

seq1  AGGAGCATCACTACATCATTTACCTGCTGATTGGAGGAATAACTTAGACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCATCACTACATCATTTACCTGCTGATTGGAGGAATAACTTAGACG  450

seq1  AATTATTTTCCATTTGATTTAAGTGGGGAACATAGCATGCACCATTTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTTCCATTTGATTTAAGTGGGGAACATAGCATGCACCATTTCTG  500

seq1  CTTATTTTATGCACAAGCATCATAATATATTAATCTTGAAAACTGTGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTATGCACAAGCATCATAATATATTAATCTTGAAAACTGTGAAA  550

seq1  TCGAAGCATATTTTCAAGAATGAGGGGTTTTTTAAGAACTAAATGAAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAGCATATTTTCAAGAATGAGGGGTTTTTTAAGAACTAAATGAAGTC  600

seq1  AGCACAGGATCATCCCATATGAGAAAGGAGCTCACCACTGTCGGAAAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGGATCATCCCATATGAGAAAGGAGCTCACCACTGTCGGAAAAGG  650

seq1  ATATGACTCTCGTTCAAGGGGGCGAAGAGCAGAGTGGACTCCCTAGGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACTCTCGTTCAAGGGGGCGAAGAGCAGAGTGGACTCCCTAGGCAG  700

seq1  GAATATTTCTTGTAGCATCACTGCTTCCTCAAGCATTTCTGCCTTTGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTCTTGTAGCATCACTGCTTCCTCAAGCATTTCTGCCTTTGGGA  750

seq1  CAAAGATCAAATGCCACATTCTGGTAAAACATCAAC-TTTGTTTTTTATC  799
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAAAGATCAAATGCCACATTCTGGTAAAACATCAACTTTTGTTTTTTATC  800

seq1  AAACAAACTCAAAAAGAGTCTG-TTGTTTCTTCACCATATCATCTAA-CT  847
      |||||||||||||||||||||| |||||||||||||||||||||||| ||
seq2  AAACAAACTCAAAAAGAGTCTGTTTGTTTCTTCACCATATCATCTAACCT  850

seq1  GTGTGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  885
      ||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  888