BAC Information

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BAC

Clone NameB6Ng01-201M21
Chromosome12 (Build37)
Map Location 120,921,401 - 120,922,589
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668615, LOC620665, Sp8, Abcb5, Itgb8, EG627557, LOC100043011, 4732474O15Rik, LOC668632
Downstream geneLOC668633, Gm528, LOC100043017
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201M21.bB6Ng01-201M21.g
ACCGA022474GA022475
length1,196914
definitionB6Ng01-201M21.b B6Ng01-201M21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtcaagtaacatatttagtattttttatttgctttacaatc
aagatacaaatgtgcattttctgtacacatgcataaagtccaatatttgc
atgaactttcatctagagaaatttagtaagatattgtagcttatagatgc
cttttttactgtaatagtgttctctagtacaggagtcaaatttcaattta
tttttatgtttgaatggggaaaatatagcatcattctctttgtccaataa
ttgaccagaatgttaagctataggcatggaatgaaaagtggttgttgcat
ggctgggatccactgggcaggctgacattaattaaaaacatttgggaaaa
aatgatctgagcagcaacttttccacctaactgctgttgtacttggccat
attccctctctcttgaccttaagaacatcatgagaaatcttgtttaattg
cttgctggaacccagatacgtcatgcttaatacatttctctgatggcctg
cttagtaaccctattaagggaagggaagagctgtatctaccatgacttgc
tgtaaaagcacagacgctgattcctcttgatcactttattttaggtgctc
agaatctgtgtgtaagcgatgtttcctagaattctgctgaaatgaattca
ctccattggattctagtttgtccaatatgctgttttatctttggagaagt
tcattcactagctaaaaaacataatctagtagacttaaagaatgattaat
ataacttcttgatgagcataaatattcttaagatacaatttttagaatta
agctaaagcaaaagcaaagtcagaagctgatgaaaggaagttatgcactt
acaatttcatccgaaaggaagaggaatgagcaatagctatgacaaaaagt
gagaaagaatgatatacacaacattcttttatgaaacaaaaataatagcc
agattatgcttctatgtcatgtccatgtggtatatttgaaatattcaccc
actacacaggattattagaagaaaggtactttgaaaaaaaagtcataaaa
aatacactcccacaatccatgcctgaccatccctggggtggtgtatgaac
ctaggaataggatgtagggatcagaccctggccaaagacacctgtaattt
ctgcaatcatccatacgaaaggtccaacctggaaccattagaactg

gaattctttatttaggtctgtaccccatttttaaattgggttatttggtt
ctctggagtctaacttcttcacttctttgtatattttggatattagccct
ctatcagatgtagggttgttaaagatctcttcccaatctgtggattgcta
gtttgtcctgatgacagtatcctttgccttacagaagctttgcaatttta
tgaggtcccatttgtcaattgttaatcttagagcacgagccattggtgtt
ctctttaggaaattttcccctgtgcccatgtgtttgaggctctttcccac
tttctcttctatcagattcagtgtatatggttttatgtggaggtccttgg
tccacttgtcttgagctttgtataggagataagaatggatttgcattctt
ttacatgcagactagctctatatatgttgaatatgctgttttcctctgaa
tggttttggcttctttgtcagggatcaggtgacaataggtgtgtaggttt
aattctcggccttcaattctattccacatgttccactatgttcatagcag
ccttatttataatagccagaagctggaaacgaaccagatgccccctcaac
agaggaacggatacagagaatgtggtacatttatacagtcgagtactact
attcagatattaaagacaatgacttcatgaaattcgaagccaaatggatg
gaactagaaaatatcatcctgagttaggtaacccagtcacaaaagaatat
acatgataggcactcactgataagtggatattaggcaaaatgcttggaat
acccacaatacaactcaccaaccttatgaagctcaagaaggaagaccaag
gtggcttctttagtcttacttagagggggaacaaaatattcaccagaggg
agagggagggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_120921401_120922589
seq2: B6Ng01-201M21.b_46_1241 (reverse)

seq1  CAGTTCTAATTGGCTCCAG--TGGACC--TCTGATGGATGATTGCAGAAA  46
      ||||||||| ||| |||||  ||||||  ||  |||||||||||||||||
seq2  CAGTTCTAA-TGGTTCCAGGTTGGACCTTTCGTATGGATGATTGCAGAAA  49

seq1  TTACA-GTGTCCTTTGCCCAGTGTCTGACTCCTACATCCTATTCCTAGTT  95
      ||||| |||| ||||| |||| ||||||  |||||||||||||||||| |
seq2  TTACAGGTGT-CTTTGGCCAGGGTCTGATCCCTACATCCTATTCCTAGGT  98

seq1  TCATTACAC--ACACAAGGATTGTCAGGCATGGATTGT-GGAGTGTA-TT  141
      ||| |||||   | || |||| |||||||||||||||| |||||||| ||
seq2  TCA-TACACCACCCCAGGGATGGTCAGGCATGGATTGTGGGAGTGTATTT  147

seq1  TTTATGACTTTTTTTTCAAAGTA-CTATCTTCTAATAATCCTGTGTAGT-  189
      ||||||||||||||||||||||| || |||||||||||||||||||||| 
seq2  TTTATGACTTTTTTTTCAAAGTACCTTTCTTCTAATAATCCTGTGTAGTG  197

seq1  GGTGAATATATCAAATATACCACATGGAACATGACATAGAAGCATAATCT  239
      ||||||||| ||||||||||||||||| ||||||||||||||||||||||
seq2  GGTGAATATTTCAAATATACCACATGG-ACATGACATAGAAGCATAATCT  246

seq1  GGCTATTATTTTTGTTTCATAAAAGAATGTTGTGTATATCATTCTTTCTC  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTATTTTTGTTTCATAAAAGAATGTTGTGTATATCATTCTTTCTC  296

seq1  ACTTTTTGTCATAGCTATTGCTCATTCCTCTTCCTTTCGGATGAAATTGT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTGTCATAGCTATTGCTCATTCCTCTTCCTTTCGGATGAAATTGT  346

seq1  AAGTGCATAACTTCCTTTCATCAGCTTCTGACTTTGCTTTTGCTTTAGCT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCATAACTTCCTTTCATCAGCTTCTGACTTTGCTTTTGCTTTAGCT  396

seq1  TAATTCTAAAAATTGTATCTTAAGAATATTTATGCTCATCAAGAAGTTAT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTAAAAATTGTATCTTAAGAATATTTATGCTCATCAAGAAGTTAT  446

seq1  ATTAATCATTCTTTAAGTCTACTAGATTATGTTTTTTAGCTAGTGAATGA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCATTCTTTAAGTCTACTAGATTATGTTTTTTAGCTAGTGAATGA  496

seq1  ACTTCTCCAAAGATAAAACAGCATATTGGACAAACTAGAATCCAATGGAG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCCAAAGATAAAACAGCATATTGGACAAACTAGAATCCAATGGAG  546

seq1  TGAATTCATTTCAGCAGAATTCTAGGAAACATCGCTTACACACAGATTCT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCATTTCAGCAGAATTCTAGGAAACATCGCTTACACACAGATTCT  596

seq1  GAGCACCTAAAATAAAGTGATCAAGAGGAATCAGCGTCTGTGCTTTTACA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACCTAAAATAAAGTGATCAAGAGGAATCAGCGTCTGTGCTTTTACA  646

seq1  GCAAGTCATGGTAGATACAGCTCTTCCCTTCCCTTAATAGGGTTACTAAG  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTCATGGTAGATACAGCTCTTCCCTTCCCTTAATAGGGTTACTAAG  696

seq1  CAGGCCATCAGAGAAATGTATTAAGCATGACGTATCTGGGTTCCAGCAAG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCATCAGAGAAATGTATTAAGCATGACGTATCTGGGTTCCAGCAAG  746

seq1  CAATTAAACAAGATTTCTCATGATGTTCTTAAGGTCAAGAGAGAGGGAAT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAAACAAGATTTCTCATGATGTTCTTAAGGTCAAGAGAGAGGGAAT  796

seq1  ATGGCCAAGTACAACAGCAGTTAGGTGGAAAAGTTGCTGCTCAGATCATT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCAAGTACAACAGCAGTTAGGTGGAAAAGTTGCTGCTCAGATCATT  846

seq1  TTTTCCCAAATGTTTTTAATTAATGTCAGCCTGCCCAGTGGATCCCAGCC  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCAAATGTTTTTAATTAATGTCAGCCTGCCCAGTGGATCCCAGCC  896

seq1  ATGCAACAACCACTTTTCATTCCATGCCTATAGCTTAACATTCTGGTCAA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAACAACCACTTTTCATTCCATGCCTATAGCTTAACATTCTGGTCAA  946

seq1  TTATTGGACAAAGAGAATGATGCTATATTTTCCCCATTCAAACATAAAAA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGACAAAGAGAATGATGCTATATTTTCCCCATTCAAACATAAAAA  996

seq1  TAAATTGAAATTTGACTCCTGTACTAGAGAACACTATTACAGTAAAAAAG  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGAAATTTGACTCCTGTACTAGAGAACACTATTACAGTAAAAAAG  1046

seq1  GCATCTATAAGCTACAATATCTTACTAAATTTCTCTAGATGAAAGTTCAT  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTATAAGCTACAATATCTTACTAAATTTCTCTAGATGAAAGTTCAT  1096

seq1  GCAAATATTGGACTTTATGCATGTGTACAGAAAATGCACATTTGTATCTT  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATATTGGACTTTATGCATGTGTACAGAAAATGCACATTTGTATCTT  1146

seq1  GATTGTAAAGCAAATAAAAAATACTAAATATGTTACTTGACAAAGAATTC  1189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTAAAGCAAATAAAAAATACTAAATATGTTACTTGACAAAGAATTC  1196


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