BAC Information

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BAC

Clone NameB6Ng01-202A05
Chromosome12 (Build37)
Map Location 93,794,585 - 93,795,728
singlet/doubletsinglet
Overlap genenone
Upstream geneGtf2a1, Ston2, EG666955, LOC100039631, Sel1l, LOC100039367, EG432681, LOC667589, LOC100039387, LOC100039425, LOC628116
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202A05.bB6Ng01-202A05.g
ACCGA022625GA022626
length1,143992
definitionB6Ng01-202A05.b B6Ng01-202A05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttagtcaccccaacacaaagaaagtaatctgacttttggcaaga
ttgatatttgacactagttccaaatataattgtcaggttcctttgtagtt
gagagagtttatgcctcaaatttgacaatgatgagaatctcttttcccct
cccataaaatatattaccatccattcttattttgtaaaattagtgagctt
ggaatgttattcacagctaaagtctgggataacttctggggataaatttt
tatagttctgacaattcagtcttttatctaattaagagaattgggctcaa
gagtctaaaaccctcaaagggctggttagaatactgatagaaagccaaca
tcagcttatcacttaataaaggatagtaagaaatgccatttatggcaaga
aaatactttccatactttagatagcttaatcctgcttgcagctcaattag
aaaactgcactggtttggcattttgaagttgacaaaagaaactatatctt
agctatattttatactgctctcctgaaatacacgacacaagcagtttacg
acaattctctctctgacccatgtttccacgatatggttcatcacaatgag
aaaggaatggaagcagaagcatgggtcagatcccatagaaaacagaaaga
gatgacgattgatgctcagcttagctttcatgtgtgtgtgtttatgtgtg
tgagtgtgtgtgtgcatgcatgtgtgttttcatgtctagtttactaatat
gtaaaatgctaatgcccatattatggtaggtcttcccatctttatcagct
taatttggataagccctaatatacatgccctcatgattggctacttgatg
acaatatcatatcaagtagaaaataagtattaactacccccgtagcccca
gatgtttgcaaaatgagtttgtgatgtcagattcagagctagacctaagc
ctaggttgatccttctcaaatatgttctctcagaaaattatttgtctcct
taatcacgcctgacttttaacataaaggggacagaagatgatagtagatc
tcattggatctgatccattatgagcagaacccacctcagtgtccattaga
attatttgcttctccagactgtgtccttcacatccaaccactc

gaattcttgatcttagccattctgactggtgtgaagtagaatctcagggt
tgttttgatttgcatttccctgatgattaaggatgttgaacaatttttca
ggtgtttctcagccatttagtatttattagttgagaattctttgcttagc
tctgttacccattttttaaaatagggttattttattttctggagtccatc
ttttgagttttttttttaattatgtattttcctcaattacatttccaatg
ctatcccaaaagtcccccctccctcttctcccctcccctacccacccatt
cccattttgtggccctggcattcccctatactgggactctctttccagtg
atggccgactaggccatcttttgatacttatgcagctagagtcaagagct
ccggggtactggttagttcataatgttgttgcacctacagggttgcagat
ctctttagctccttgggtactttctctagctcctccattgggggccctgt
gatccatccaatagttgactgtgagcatccacttctgtgtttgctaggcc
ccggcctagtctcacaagagacagctatatcacggtccttgcaacaaacg
cttgctagtgtatgcaatggtgtcatcgtttggaggataattatgggatg
gatccccggatatggcagtctctagatggtccatccttttgtctcagctc
caaactttgtctctgtaactcatattggatattagtcgcctatcagattt
aggatttaggtaaagatcctttcccaatctgttggtggcctttttgtctt
attgacagtgttttttgccttatagaagttttatgaggtcccgtttgtcg
attctcgatcttatagcacaagccattgctcttctgttcaggaattttcc
ccctgtgcccatatcttcgaggcttttcccactttctcctctatagtttc
aaggctctagttttcctgtggagttcctgatccaattgactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_93794585_93795728
seq2: B6Ng01-202A05.b_49_1191 (reverse)

seq1  GAGTGG-TGGATGTGAA-GACACAGTCTTGGAGAAGCAAATAA-TCTAAT  47
      |||||| |||||||||| ||||||||| ||||||||||||||| ||||||
seq2  GAGTGGTTGGATGTGAAGGACACAGTC-TGGAGAAGCAAATAATTCTAAT  49

seq1  GGACACTGA-GTGGGTTCTGCTCATTATGGATCAGATTCCAATGAGATTC  96
      ||||||||| ||||||||||||||| |||||||||| |||||||||| ||
seq2  GGACACTGAGGTGGGTTCTGCTCATAATGGATCAGA-TCCAATGAGA-TC  97

seq1  TACTATCATC-TCTGTCCCCTTTATGTTAAAAGTCAGGCGTGATTAAGGA  145
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TACTATCATCTTCTGTCCCCTTTATGTTAAAAGTCAGGCGTGATTAAGGA  147

seq1  GACAAATAATTTTCTGAGAGAACATATTTTGAGAAGGATCAACCTAGGCT  195
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GACAAATAATTTTCTGAGAGAACATA-TTTGAGAAGGATCAACCTAGGCT  196

seq1  TAGGTCTAGCTCTGAATCTTGACATCACAAACTCATTTTGCAAACATCTC  245
      |||||||||||||||||| |||||||||||||||||||||||||||||| 
seq2  TAGGTCTAGCTCTGAATC-TGACATCACAAACTCATTTTGCAAACATCT-  244

seq1  ATGGCTACTGTGGTAGTTAATACTTATTTTCTACTTGATATGATATTGTC  295
        |||||| | |||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTACGGGGGTAGTTAATACTTATTTTCTACTTGATATGATATTGTC  294

seq1  ATCAAGTAGCCAATCATGAGGGCATGTATATTAGGGCTTATCCAAATTAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTAGCCAATCATGAGGGCATGTATATTAGGGCTTATCCAAATTAA  344

seq1  GCTGATAAAGATGGGAAGACCTACCATAATATGGGCATTAGCATTTTACA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATAAAGATGGGAAGACCTACCATAATATGGGCATTAGCATTTTACA  394

seq1  TATTAGTAAACTAGACATGAAAACACACATGCATGCACACACACACTCAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTAAACTAGACATGAAAACACACATGCATGCACACACACACTCAC  444

seq1  ACACATAAACACACACACATGAAAGCTAAGCTGAGCATCAATCGTCATCT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATAAACACACACACATGAAAGCTAAGCTGAGCATCAATCGTCATCT  494

seq1  CTTTCTGTTTTCTATGGGATCTGACCCATGCTTCTGCTTCCATTCCTTTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTTTTCTATGGGATCTGACCCATGCTTCTGCTTCCATTCCTTTC  544

seq1  TCATTGTGATGAACCATATCGTGGAAACATGGGTCAGAGAGAGAATTGTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTGATGAACCATATCGTGGAAACATGGGTCAGAGAGAGAATTGTC  594

seq1  GTAAACTGCTTGTGTCGTGTATTTCAGGAGAGCAGTATAAAATATAGCTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACTGCTTGTGTCGTGTATTTCAGGAGAGCAGTATAAAATATAGCTA  644

seq1  AGATATAGTTTCTTTTGTCAACTTCAAAATGCCAAACCAGTGCAGTTTTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAGTTTCTTTTGTCAACTTCAAAATGCCAAACCAGTGCAGTTTTC  694

seq1  TAATTGAGCTGCAAGCAGGATTAAGCTATCTAAAGTATGGAAAGTATTTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAGCTGCAAGCAGGATTAAGCTATCTAAAGTATGGAAAGTATTTT  744

seq1  CTTGCCATAAATGGCATTTCTTACTATCCTTTATTAAGTGATAAGCTGAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCATAAATGGCATTTCTTACTATCCTTTATTAAGTGATAAGCTGAT  794

seq1  GTTGGCTTTCTATCAGTATTCTAACCAGCCCTTTGAGGGTTTTAGACTCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTTTCTATCAGTATTCTAACCAGCCCTTTGAGGGTTTTAGACTCT  844

seq1  TGAGCCCAATTCTCTTAATTAGATAAAAGACTGAATTGTCAGAACTATAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCCAATTCTCTTAATTAGATAAAAGACTGAATTGTCAGAACTATAA  894

seq1  AAATTTATCCCCAGAAGTTATCCCAGACTTTAGCTGTGAATAACATTCCA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATCCCCAGAAGTTATCCCAGACTTTAGCTGTGAATAACATTCCA  944

seq1  AGCTCACTAATTTTACAAAATAAGAATGGATGGTAATATATTTTATGGGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACTAATTTTACAAAATAAGAATGGATGGTAATATATTTTATGGGA  994

seq1  GGGGAAAAGAGATTCTCATCATTGTCAAATTTGAGGCATAAACTCTCTCA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAAGAGATTCTCATCATTGTCAAATTTGAGGCATAAACTCTCTCA  1044

seq1  ACTACAAAGGAACCTGACAATTATATTTGGAACTAGTGTCAAATATCAAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAAAGGAACCTGACAATTATATTTGGAACTAGTGTCAAATATCAAT  1094

seq1  CTTGCCAAAAGTCAGATTACTTTCTTTGTGTTGGGGTGACTAAGAATTC  1144
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCAAAAGTCAGATTACTTTCTTTGTGTTGGGGTGACTAAGAATTC  1143


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